functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
MG820638 |
Definition |
Propionibacterium phage pa6919-4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29784 |
Host Name |
Propionibacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
54.07 |
Number of singletons |
0 |
Number of paralogs |
1 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
AUV62318.1 | MG820638_p32 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21868 | 22821 |
AUV62328.1 | MG820638_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 27028 | 27336 |
AUV62300.1 | MG820638_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8227 | 8514 |
AUV62317.1 | MG820638_p31 | hypothetical protein | phrog_11072 | unknown function | unknown function | -1 | 21602 | 21799 |
AUV62320.1 | MG820638_p34 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23382 | 23792 |
AUV62323.1 | MG820638_p37 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25202 | 25402 |
AUV62295.1 | MG820638_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6091 | 6438 |
AUV62324.1 | MG820638_p38 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25399 | 25626 |
AUV62315.1 | MG820638_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20126 | 20689 |
AUV62316.1 | MG820638_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20733 | 21404 |
AUV62294.1 | MG820638_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5601 | 6089 |
AUV62305.1 | MG820638_p19 | tail fiber protein | phrog_1806 | collagen like minor tail | tail | 1 | 14556 | 15362 |
AUV62304.1 | MG820638_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14287 | 14553 |
AUV62302.1 | MG820638_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12246 | 13406 |
AUV62326.1 | MG820638_p40 | hypothetical protein | phrog_7707 | unknown function | unknown function | -1 | 26267 | 26554 |
AUV62299.1 | MG820638_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7832 | 8128 |
AUV62301.1 | MG820638_p14 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8522 | 11287 |
AUV62322.1 | MG820638_p36 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24736 | 25095 |
AUV62312.1 | MG820638_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18345 | 19391 |
AUV62292.1 | MG820638_p5 | capsid and scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4079 | 4633 |
AUV62313.1 | MG820638_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19388 | 19582 |
AUV62325.1 | MG820638_p39 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25649 | 26182 |
AUV62319.1 | MG820638_p33 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22868 | 23338 |
AUV62329.1 | MG820638_p43 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29417 | 29722 |
AUV62288.1 | MG820638_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 20 | 373 |
AUV62321.1 | MG820638_p35 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23789 | 24736 |
AUV62310.1 | MG820638_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17711 | 17995 |
AUX13527.1 | MG820638_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11303 | 12241 |
AUV62306.1 | MG820638_p20 | hypothetical protein | phrog_670 | endolysin | lysis | 1 | 15420 | 16283 |
AUV62296.1 | MG820638_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6445 | 6735 |
AUV62314.1 | MG820638_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19566 | 20129 |
AUV62297.1 | MG820638_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6732 | 7103 |
AUV62308.1 | MG820638_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16783 | 17304 |
AUV62298.1 | MG820638_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7163 | 7804 |
AUV62293.1 | MG820638_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4640 | 5584 |
AUV62289.1 | MG820638_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
AUV62303.1 | MG820638_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13427 | 14245 |
AUV62311.1 | MG820638_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 18014 | 18334 |
AUV62307.1 | MG820638_p21 | hypothetical protein | phrog_443 | holin | lysis | 1 | 16296 | 16694 |
AUV62309.1 | MG820638_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17309 | 17707 |
AUV62290.1 | MG820638_p3 | portal (connector) protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
AUV62327.1 | MG820638_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26685 | 26996 |
AUV62291.1 | MG820638_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3213 | 3968 |