| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG820640 |
Definition |
Propionibacterium phage pa15, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29309 |
Host Name |
Propionibacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
42 |
%GC |
54.29 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUX13530.1 | MG820640_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15629 | 16309 |
| AUV62372.1 | MG820640_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 47 | 373 |
| AUV62386.1 | MG820640_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11292 | 12239 |
| AUV62373.1 | MG820640_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| AUX13534.1 | MG820640_p42 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28945 | 29247 |
| AUV62409.1 | MG820640_p40 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26306 | 26617 |
| AUV62410.1 | MG820640_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26655 | 26963 |
| AUX13533.1 | MG820640_p32 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21976 | 22743 |
| AUV62404.1 | MG820640_p35 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23800 | 24747 |
| AUV62383.1 | MG820640_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7821 | 8117 |
| AUV62385.1 | MG820640_p14 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8511 | 11276 |
| AUV62408.1 | MG820640_p39 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25652 | 26185 |
| AUV62376.1 | MG820640_p5 | capsid and scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| AUV62390.1 | MG820640_p19 | tail fiber protein | phrog_1806 | collagen like minor tail | tail | 1 | 14566 | 15399 |
| AUV62406.1 | MG820640_p37 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25207 | 25410 |
| AUV62407.1 | MG820640_p38 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25407 | 25634 |
| AUV62403.1 | MG820640_p34 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23393 | 23803 |
| AUV62382.1 | MG820640_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7153 | 7794 |
| AUV62387.1 | MG820640_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12247 | 13404 |
| AUV62392.1 | MG820640_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17339 | 17731 |
| AUV62388.1 | MG820640_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13424 | 14242 |
| AUV62393.1 | MG820640_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17735 | 18001 |
| AUV62375.1 | MG820640_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| AUV62396.1 | MG820640_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19397 | 19597 |
| AUV62377.1 | MG820640_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5582 |
| AUV62405.1 | MG820640_p36 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24747 | 25100 |
| AUV62398.1 | MG820640_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20141 | 20707 |
| AUV62379.1 | MG820640_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6089 | 6436 |
| AUV62384.1 | MG820640_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8216 | 8503 |
| AUV62394.1 | MG820640_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 18023 | 18343 |
| AUV62395.1 | MG820640_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18354 | 19400 |
| AUV62378.1 | MG820640_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5599 | 6087 |
| AUV62401.1 | MG820640_p31 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21620 | 21979 |
| AUX13531.1 | MG820640_p21 | hypothetical protein | phrog_443 | holin | lysis | 1 | 16322 | 16726 |
| AUV62374.1 | MG820640_p3 | portal (connector) protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| AUV62389.1 | MG820640_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14299 | 14562 |
| AUV62380.1 | MG820640_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6443 | 6733 |
| AUX13532.1 | MG820640_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16812 | 17333 |
| AUV62399.1 | MG820640_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20751 | 21422 |
| AUV62397.1 | MG820640_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19581 | 20144 |
| AUV62402.1 | MG820640_p33 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22881 | 23351 |
| AUV62381.1 | MG820640_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6730 | 7101 |