| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG820641 |
Definition |
Propionibacterium phage pa615, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29307 |
Host Name |
Propionibacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
54.41 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV62444.1 | MG820641_p34 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23390 | 23800 |
| AUV62439.1 | MG820641_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20138 | 20704 |
| AUV62435.1 | MG820641_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 18020 | 18340 |
| AUV62442.1 | MG820641_p32 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21973 | 22740 |
| AUX13535.1 | MG820641_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15572 | 16306 |
| AUV62416.1 | MG820641_p5 | capsid and scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| AUV62413.1 | MG820641_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| AUV62443.1 | MG820641_p33 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22878 | 23348 |
| AUV62415.1 | MG820641_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| AUV62451.1 | MG820641_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26652 | 26960 |
| AUV62418.1 | MG820641_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5608 | 6087 |
| AUV62437.1 | MG820641_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19394 | 19594 |
| AUV62429.1 | MG820641_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14299 | 14562 |
| AUV62428.1 | MG820641_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13424 | 14242 |
| AUV62422.1 | MG820641_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7141 | 7794 |
| AUV62440.1 | MG820641_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20748 | 21419 |
| AUV62424.1 | MG820641_p13 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8216 | 8503 |
| AUV62420.1 | MG820641_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6443 | 6733 |
| AUV62414.1 | MG820641_p3 | portal (connector) protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| AUV62419.1 | MG820641_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6089 | 6436 |
| AUV62438.1 | MG820641_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19578 | 20141 |
| AUV62441.1 | MG820641_p31 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21617 | 21973 |
| AUV62426.1 | MG820641_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11292 | 12239 |
| AUV62446.1 | MG820641_p36 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24744 | 25097 |
| AUV62449.1 | MG820641_p39 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25649 | 26182 |
| AUV62412.1 | MG820641_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 20 | 373 |
| AUV62421.1 | MG820641_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6730 | 7101 |
| AUV62431.1 | MG820641_p21 | hypothetical protein | phrog_443 | holin | lysis | 1 | 16319 | 16723 |
| AUV62448.1 | MG820641_p38 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25404 | 25631 |
| AUV62450.1 | MG820641_p40 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26303 | 26614 |
| AUV62423.1 | MG820641_p12 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7821 | 8117 |
| AUX13536.1 | MG820641_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26944 | 27057 |
| AUV62452.1 | MG820641_p43 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28940 | 29245 |
| AUV62433.1 | MG820641_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17336 | 17728 |
| AUV62447.1 | MG820641_p37 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25204 | 25407 |
| AUV62430.1 | MG820641_p19 | tail fiber protein | phrog_1806 | collagen like minor tail | tail | 1 | 14566 | 15396 |
| AUV62445.1 | MG820641_p35 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23797 | 24744 |
| AUV62427.1 | MG820641_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12247 | 13404 |
| AUV62436.1 | MG820641_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18351 | 19397 |
| AUV62417.1 | MG820641_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5582 |
| AUV62425.1 | MG820641_p14 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8511 | 11276 |
| AUV62432.1 | MG820641_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16809 | 17330 |
| AUV62434.1 | MG820641_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17732 | 17998 |