Genomic map of Propionibacterium phage pa28 (MG820642)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG820642
Definition
Propionibacterium phage pa28, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
NUCCORE
Length
29733
Host Name
Propionibacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
54.13
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUX13537.1 MG820642_p6 major capsid protein phrog_10 major head protein head and packaging 1 4641 5588
AUV62467.1 MG820642_p16 hypothetical protein phrog_110 minor tail protein tail 1 12259 13416
AUV62486.1 MG820642_p35 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23774 24721
AUV62495.1 MG820642_p43 hypothetical protein singleton unknown function unknown function 1 29172 29291
AUV62470.1 MG820642_p19 tail fiber protein phrog_1806 collagen like minor tail tail 1 14578 15393
AUV62482.1 MG820642_p31 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21596 21952
AUV62491.1 MG820642_p40 hypothetical protein phrog_7707 unknown function unknown function -1 26248 26535
AUV62493.1 MG820642_p42 hypothetical protein phrog_919 unknown function unknown function -1 27006 27314
AUV62474.1 MG820642_p23 hypothetical protein phrog_1729 unknown function unknown function -1 17324 17716
AUV62479.1 MG820642_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19557 20120
AUV62461.1 MG820642_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6740 7111
AUV62492.1 MG820642_p41 hypothetical protein phrog_919 unknown function unknown function -1 26666 26974
AUV62487.1 MG820642_p36 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24721 25080
AUV62473.1 MG820642_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16803 17318
AUX13538.1 MG820642_p11 major tail protein phrog_117 major tail protein tail 1 7170 7811
AUV62485.1 MG820642_p34 hypothetical protein phrog_1890 unknown function unknown function -1 23367 23777
AUV62483.1 MG820642_p32 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21952 22815
AUV62456.1 MG820642_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3218 3973
AUV62476.1 MG820642_p25 hypothetical protein phrog_1340 unknown function unknown function -1 18005 18325
AUV62484.1 MG820642_p33 hypothetical protein phrog_1288 unknown function unknown function -1 22857 23327
AUV62468.1 MG820642_p17 hypothetical protein phrog_1910 lectin other 1 13436 14254
AUV62488.1 MG820642_p37 hypothetical protein phrog_1937 unknown function unknown function -1 25187 25387
AUV62457.1 MG820642_p5 capsid and scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4084 4641
AUV62472.1 MG820642_p21 hypothetical protein phrog_443 holin lysis 1 16315 16716
AUV62478.1 MG820642_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19379 19573
AUV62481.1 MG820642_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20727 21398
AUV62496.1 MG820642_p44 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29369 29671
AUV62490.1 MG820642_p39 hypothetical protein phrog_1908 unknown function unknown function -1 25629 26162
AUV62464.1 MG820642_p13 hypothetical protein phrog_3166 unknown function unknown function 1 8234 8521
AUV62453.1 MG820642_p1 hypothetical protein phrog_1897 terminase small subunit head and packaging 1 20 373
AUV62480.1 MG820642_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20117 20683
AUV62477.1 MG820642_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18336 19382
AUV62466.1 MG820642_p15 minor tail protein phrog_106 minor tail protein tail 1 11310 12251
AUV62454.1 MG820642_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 378 1889
AUV62475.1 MG820642_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17720 17986
AUV62471.1 MG820642_p18 hypothetical protein phrog_1958 minor tail protein tail 1 14311 14574
AUV62460.1 MG820642_p9 hypothetical protein phrog_387 neck protein connector 1 6453 6743
AUV62459.1 MG820642_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6099 6446
AUV62465.1 MG820642_p14 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 8529 11294
AUV62489.1 MG820642_p38 hypothetical protein phrog_1884 unknown function unknown function -1 25384 25611
AUX13539.1 MG820642_p20 hypothetical protein phrog_670 endolysin lysis 1 15445 16302
AUV62455.1 MG820642_p3 portal (connector) protein phrog_104 portal protein head and packaging 1 1886 3211
AUV62463.1 MG820642_p12 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7839 8135
AUV62458.1 MG820642_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5618 6097