| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG820643 |
Definition |
Propionibacterium phage pa35, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29491 |
Host Name |
Propionibacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.27 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV62514.1 | MG820643_p18 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13443 | 14261 |
| AUV62506.1 | MG820643_p10 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6448 | 6738 |
| AUV62517.1 | MG820643_p21 | hypothetical protein | phrog_670 | endolysin | lysis | 1 | 15517 | 16326 |
| AUV62498.1 | MG820643_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| AUV62536.1 | MG820643_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25147 | 25374 |
| AUV62505.1 | MG820643_p9 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6094 | 6441 |
| AUV62503.1 | MG820643_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4633 | 5583 |
| AUV62519.1 | MG820643_p23 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16827 | 17348 |
| AUV62527.1 | MG820643_p31 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20480 | 21151 |
| AUV62531.1 | MG820643_p35 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22615 | 23085 |
| AUV62507.1 | MG820643_p11 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6735 | 7106 |
| AUV62526.1 | MG820643_p30 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19876 | 20433 |
| AUV62524.1 | MG820643_p28 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19425 | 19622 |
| AUV62522.1 | MG820643_p26 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 18051 | 18371 |
| AUV62532.1 | MG820643_p36 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23140 | 23544 |
| AUV62521.1 | MG820643_p25 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17750 | 18034 |
| AUV62523.1 | MG820643_p27 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18382 | 19428 |
| AUV62509.1 | MG820643_p13 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7846 | 8142 |
| AUX13543.1 | MG820643_p44 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26789 | 27097 |
| AUV62533.1 | MG820643_p37 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23541 | 24482 |
| AUV62499.1 | MG820643_p3 | portal (connector) protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3205 |
| AUV62529.1 | MG820643_p33 | hypothetical protein | phrog_11072 | unknown function | unknown function | -1 | 21349 | 21546 |
| AUV62539.1 | MG820643_p45 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29127 | 29429 |
| AUV62530.1 | MG820643_p34 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21615 | 22445 |
| AUV62525.1 | MG820643_p29 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19606 | 19821 |
| AUV62516.1 | MG820643_p20 | tail fiber protein | phrog_1806 | collagen like minor tail | tail | 1 | 14584 | 15417 |
| AUV62534.1 | MG820643_p38 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24482 | 24841 |
| AUV62510.1 | MG820643_p14 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8241 | 8528 |
| AUX13541.1 | MG820643_p42 | hypothetical protein | phrog_7707 | unknown function | unknown function | -1 | 26015 | 26299 |
| AUV62511.1 | MG820643_p15 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8536 | 11301 |
| AUV62501.1 | MG820643_p5 | hypothetical protein | phrog_29539 | unknown function | unknown function | 1 | 3969 | 4082 |
| AUV62520.1 | MG820643_p24 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17354 | 17746 |
| AUV62508.1 | MG820643_p12 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7165 | 7818 |
| AUV62497.1 | MG820643_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| AUV62504.1 | MG820643_p8 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5631 | 6092 |
| AUV62512.1 | MG820643_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11316 | 12257 |
| AUV62518.1 | MG820643_p22 | hypothetical protein | phrog_443 | holin | lysis | 1 | 16339 | 16740 |
| AUV62535.1 | MG820643_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24947 | 25150 |
| AUV62502.1 | MG820643_p6 | capsid and scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4075 | 4626 |
| AUX13542.1 | MG820643_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26442 | 26753 |
| AUV62528.1 | MG820643_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21202 | 21381 |
| AUV62500.1 | MG820643_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3202 | 3966 |
| AUX13540.1 | MG820643_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25398 | 25931 |
| AUV62513.1 | MG820643_p17 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12265 | 13422 |
| AUV62515.1 | MG820643_p19 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14318 | 14581 |