Genomic map of Propionibacterium phage pa3-SS3 (MG820645)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG820645
Definition
Propionibacterium phage pa3-SS3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
NUCCORE
Length
29137
Host Name
Propionibacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
43
%GC
54.41
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUV62592.1 MG820645_p11 hypothetical protein phrog_1892 minor tail protein tail 1 6720 7091
AUV62614.1 MG820645_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21496 22449
AUV62591.1 MG820645_p10 hypothetical protein phrog_387 neck protein connector 1 6433 6723
AUV62605.1 MG820645_p24 hypothetical protein phrog_1729 unknown function unknown function -1 17258 17647
AUV62615.1 MG820645_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22496 22966
AUV62617.1 MG820645_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23410 24351
AUV62586.1 MG820645_p5 hypothetical protein phrog_29539 unknown function unknown function 1 3964 4077
AUV62619.1 MG820645_p38 hypothetical protein phrog_1937 unknown function unknown function -1 24819 25025
AUV62618.1 MG820645_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24351 24710
AUV62595.1 MG820645_p14 hypothetical protein phrog_3166 unknown function unknown function 1 8209 8496
AUV62616.1 MG820645_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23009 23413
AUV62585.1 MG820645_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3197 3961
AUV62593.1 MG820645_p12 major tail protein phrog_117 major tail protein tail 1 7143 7787
AUV62622.1 MG820645_p41 hypothetical protein phrog_919 unknown function unknown function -1 25928 26239
AUV62597.1 MG820645_p16 minor tail protein phrog_106 minor tail protein tail 1 11284 12225
AUV62594.1 MG820645_p13 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7814 8110
AUV62588.1 MG820645_p7 major capsid protein phrog_10 major head protein head and packaging 1 4601 5572
AUV62610.1 MG820645_p29 hypothetical protein phrog_5969 unknown function unknown function -1 19489 19701
AUV62609.1 MG820645_p28 hypothetical protein phrog_1923 unknown function unknown function -1 19308 19505
AUV62584.1 MG820645_p3 portal (connector) protein phrog_104 portal protein head and packaging 1 1881 3200
AUV62583.1 MG820645_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 373 1884
AUV62587.1 MG820645_p6 capsid and scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4070 4594
AUV62599.1 MG820645_p18 hypothetical protein phrog_1910 lectin other 1 13411 14229
AUV62623.1 MG820645_p42 hypothetical protein phrog_919 unknown function unknown function -1 26271 26579
AUV62601.1 MG820645_p20 tail fiber protein phrog_1806 collagen like minor tail tail 1 14531 15337
AUV62608.1 MG820645_p27 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18265 19311
AUV62612.1 MG820645_p31 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20361 21032
AUV62607.1 MG820645_p26 hypothetical protein phrog_1340 unknown function unknown function -1 17935 18255
AUV62611.1 MG820645_p30 hypothetical protein phrog_1881 unknown function unknown function -1 19756 20313
AUV62621.1 MG820645_p40 hypothetical protein phrog_1908 unknown function unknown function -1 25272 25805
AUV62620.1 MG820645_p39 hypothetical protein phrog_1884 unknown function unknown function -1 25018 25248
AUV62590.1 MG820645_p9 hypothetical protein phrog_501 head closure Hc1 connector 1 6079 6426
AUV62589.1 MG820645_p8 hypothetical protein phrog_1290 head-tail adaptor connector 1 5589 6077
AUV62602.1 MG820645_p21 hypothetical protein phrog_670 endolysin lysis 1 15382 16242
AUV62598.1 MG820645_p17 hypothetical protein phrog_110 minor tail protein tail 1 12233 13390
AUV62603.1 MG820645_p22 hypothetical protein phrog_443 holin lysis 1 16255 16650
AUV62600.1 MG820645_p19 hypothetical protein phrog_1958 minor tail protein tail 1 14271 14531
AUV62604.1 MG820645_p23 hypothetical protein phrog_2092 unknown function unknown function -1 16743 17252
AUV62613.1 MG820645_p32 hypothetical protein phrog_11072 unknown function unknown function -1 21230 21427
AUV62596.1 MG820645_p15 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 8504 11269
AUV62606.1 MG820645_p25 hypothetical protein phrog_1947 unknown function unknown function -1 17651 17917
AUV62582.1 MG820645_p1 hypothetical protein phrog_1897 terminase small subunit head and packaging 1 2 373
AUV62624.1 MG820645_p43 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28773 29075