| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG820645 |
Definition |
Propionibacterium phage pa3-SS3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29137 |
Host Name |
Propionibacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
54.41 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV62592.1 | MG820645_p11 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6720 | 7091 |
| AUV62614.1 | MG820645_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21496 | 22449 |
| AUV62591.1 | MG820645_p10 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6433 | 6723 |
| AUV62605.1 | MG820645_p24 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17258 | 17647 |
| AUV62615.1 | MG820645_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22496 | 22966 |
| AUV62617.1 | MG820645_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23410 | 24351 |
| AUV62586.1 | MG820645_p5 | hypothetical protein | phrog_29539 | unknown function | unknown function | 1 | 3964 | 4077 |
| AUV62619.1 | MG820645_p38 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 24819 | 25025 |
| AUV62618.1 | MG820645_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24351 | 24710 |
| AUV62595.1 | MG820645_p14 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8209 | 8496 |
| AUV62616.1 | MG820645_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23009 | 23413 |
| AUV62585.1 | MG820645_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3197 | 3961 |
| AUV62593.1 | MG820645_p12 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7143 | 7787 |
| AUV62622.1 | MG820645_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 25928 | 26239 |
| AUV62597.1 | MG820645_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11284 | 12225 |
| AUV62594.1 | MG820645_p13 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7814 | 8110 |
| AUV62588.1 | MG820645_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4601 | 5572 |
| AUV62610.1 | MG820645_p29 | hypothetical protein | phrog_5969 | unknown function | unknown function | -1 | 19489 | 19701 |
| AUV62609.1 | MG820645_p28 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19308 | 19505 |
| AUV62584.1 | MG820645_p3 | portal (connector) protein | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3200 |
| AUV62583.1 | MG820645_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| AUV62587.1 | MG820645_p6 | capsid and scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4070 | 4594 |
| AUV62599.1 | MG820645_p18 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13411 | 14229 |
| AUV62623.1 | MG820645_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26271 | 26579 |
| AUV62601.1 | MG820645_p20 | tail fiber protein | phrog_1806 | collagen like minor tail | tail | 1 | 14531 | 15337 |
| AUV62608.1 | MG820645_p27 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18265 | 19311 |
| AUV62612.1 | MG820645_p31 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20361 | 21032 |
| AUV62607.1 | MG820645_p26 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17935 | 18255 |
| AUV62611.1 | MG820645_p30 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 19756 | 20313 |
| AUV62621.1 | MG820645_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25272 | 25805 |
| AUV62620.1 | MG820645_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25018 | 25248 |
| AUV62590.1 | MG820645_p9 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6079 | 6426 |
| AUV62589.1 | MG820645_p8 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5589 | 6077 |
| AUV62602.1 | MG820645_p21 | hypothetical protein | phrog_670 | endolysin | lysis | 1 | 15382 | 16242 |
| AUV62598.1 | MG820645_p17 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12233 | 13390 |
| AUV62603.1 | MG820645_p22 | hypothetical protein | phrog_443 | holin | lysis | 1 | 16255 | 16650 |
| AUV62600.1 | MG820645_p19 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14271 | 14531 |
| AUV62604.1 | MG820645_p23 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16743 | 17252 |
| AUV62613.1 | MG820645_p32 | hypothetical protein | phrog_11072 | unknown function | unknown function | -1 | 21230 | 21427 |
| AUV62596.1 | MG820645_p15 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8504 | 11269 |
| AUV62606.1 | MG820645_p25 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17651 | 17917 |
| AUV62582.1 | MG820645_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| AUV62624.1 | MG820645_p43 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28773 | 29075 |