| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG835450 |
Definition |
Pontimonas phage phiPsal1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
31069 |
Host Name |
Pontimonas salivibrio |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
53.27 |
Number of singletons |
32 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV61415.1 | MG835450_p6 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 3809 | 5263 |
| AUV61455.1 | MG835450_p46 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 25118 | 26392 |
| AUV61417.1 | MG835450_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5421 | 5567 |
| AUV61419.1 | MG835450_p10 | group I glycosyltransferase | phrog_2170 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 6979 | 8172 |
| AUV61454.1 | MG835450_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24936 | 25118 |
| AUV61425.1 | MG835450_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10817 | 11068 |
| AUV61458.1 | MG835450_p49 | single stranded DNA binding protein | singleton | unknown function | unknown function | 1 | 27170 | 27538 |
| AUV61446.1 | MG835450_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21208 | 21534 |
| AUV61423.1 | MG835450_p14 | tail completion protein | phrog_17840 | tail terminator | connector | 1 | 9978 | 10379 |
| AUV61410.1 | MG835450_p1 | small terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 97 | 531 |
| AUV61460.1 | MG835450_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27964 | 28263 |
| AUV61435.1 | MG835450_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17665 | 17898 |
| AUV61422.1 | MG835450_p13 | neck protein | phrog_442 | head-tail adaptor | connector | 1 | 9409 | 9981 |
| AUV61450.1 | MG835450_p41 | holiday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 22906 | 23241 |
| AUV61461.1 | MG835450_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28260 | 28439 |
| AUV61429.1 | MG835450_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15242 | 15502 |
| AUV61411.1 | MG835450_p2 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 528 | 2039 |
| AUV61443.1 | MG835450_p34 | lambda exonuclease | singleton | unknown function | unknown function | 1 | 19695 | 20288 |
| AUV61457.1 | MG835450_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27012 | 27170 |
| AUV61413.1 | MG835450_p4 | portal | phrog_12 | portal protein | head and packaging | 1 | 2175 | 3539 |
| AUV61416.1 | MG835450_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5263 | 5424 |
| AUV61438.1 | MG835450_p29 | HTH protein | singleton | unknown function | unknown function | -1 | 18564 | 18767 |
| AUV61436.1 | MG835450_p27 | hypothetical protein | phrog_22774 | unknown function | unknown function | 1 | 17895 | 18125 |
| AUV61418.1 | MG835450_p9 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5764 | 6909 |
| AUV61452.1 | MG835450_p43 | RepO | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 23804 | 24610 |
| AUV61447.1 | MG835450_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22076 | 22297 |
| AUV61437.1 | MG835450_p28 | holin | phrog_565 | holin | lysis | 1 | 18115 | 18378 |
| AUV61421.1 | MG835450_p12 | GT2 family glycosyltransferase | phrog_29879 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 8698 | 9351 |
| AUV61414.1 | MG835450_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3536 | 3805 |
| AUV61432.1 | MG835450_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16560 | 16739 |
| AUV61428.1 | MG835450_p19 | tail fiber | singleton | unknown function | unknown function | 1 | 14044 | 15231 |
| AUV61459.1 | MG835450_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27707 | 27937 |
| AUV61430.1 | MG835450_p21 | virion structural protein | phrog_1276 | unknown function | unknown function | 1 | 15509 | 15844 |
| AUV61464.1 | MG835450_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30364 | 30543 |
| AUV61451.1 | MG835450_p42 | HNH nuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 23228 | 23680 |
| AUV61424.1 | MG835450_p15 | tail tube | phrog_4574 | major tail protein | tail | 1 | 10393 | 10803 |
| AUV61439.1 | MG835450_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18869 | 19096 |
| AUV61463.1 | MG835450_p54 | repair endonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29181 | 30350 |
| AUV61453.1 | MG835450_p44 | replisome organizer | singleton | unknown function | unknown function | 1 | 24607 | 24939 |
| AUV61427.1 | MG835450_p18 | tape measure | phrog_991 | tail length tape measure protein | tail | 1 | 11822 | 14044 |
| AUV61434.1 | MG835450_p25 | peptidase | phrog_3578 | endolysin | lysis | 1 | 17120 | 17668 |
| AUV61462.1 | MG835450_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28943 | 29188 |
| AUV61441.1 | MG835450_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19238 | 19516 |
| AUV61442.1 | MG835450_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19520 | 19708 |
| AUV61440.1 | MG835450_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19093 | 19248 |
| AUV61431.1 | MG835450_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16044 | 16517 |
| AUV61444.1 | MG835450_p35 | HTH protein | singleton | unknown function | unknown function | 1 | 20328 | 20603 |
| AUV61456.1 | MG835450_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26392 | 26604 |
| AUV61426.1 | MG835450_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11169 | 11822 |
| AUV61449.1 | MG835450_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22751 | 22909 |
| AUV61465.1 | MG835450_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30570 | 30683 |
| AUV61433.1 | MG835450_p24 | hypothetical protein | phrog_7759 | unknown function | unknown function | 1 | 16753 | 17133 |
| AUV61412.1 | MG835450_p3 | hypothetical protein | phrog_7105 | unknown function | unknown function | 1 | 2047 | 2175 |
| AUV61420.1 | MG835450_p11 | SAM dependent methyltransferase | phrog_32762 | SAM-dependent methyltransferase | other | -1 | 8162 | 8680 |
| AUV61445.1 | MG835450_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20603 | 21112 |
| AUV61448.1 | MG835450_p39 | differentiation transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 22294 | 22554 |