Genomic map of Pontimonas phage phiPsal1 (MG835450)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG835450
Definition
Pontimonas phage phiPsal1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
31069
Host Name
Pontimonas salivibrio
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
53.27
Number of singletons
32
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUV61415.1 MG835450_p6 prohead protease phrog_80 head maturation protease head and packaging 1 3809 5263
AUV61455.1 MG835450_p46 DNA methylase phrog_67 DNA methyltransferase other 1 25118 26392
AUV61417.1 MG835450_p8 hypothetical protein singleton unknown function unknown function 1 5421 5567
AUV61419.1 MG835450_p10 group I glycosyltransferase phrog_2170 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 6979 8172
AUV61454.1 MG835450_p45 hypothetical protein singleton unknown function unknown function 1 24936 25118
AUV61425.1 MG835450_p16 hypothetical protein singleton unknown function unknown function 1 10817 11068
AUV61458.1 MG835450_p49 single stranded DNA binding protein singleton unknown function unknown function 1 27170 27538
AUV61446.1 MG835450_p37 hypothetical protein singleton unknown function unknown function 1 21208 21534
AUV61423.1 MG835450_p14 tail completion protein phrog_17840 tail terminator connector 1 9978 10379
AUV61410.1 MG835450_p1 small terminase phrog_83 terminase small subunit head and packaging 1 97 531
AUV61460.1 MG835450_p51 hypothetical protein singleton unknown function unknown function 1 27964 28263
AUV61435.1 MG835450_p26 hypothetical protein singleton unknown function unknown function 1 17665 17898
AUV61422.1 MG835450_p13 neck protein phrog_442 head-tail adaptor connector 1 9409 9981
AUV61450.1 MG835450_p41 holiday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 22906 23241
AUV61461.1 MG835450_p52 hypothetical protein singleton unknown function unknown function 1 28260 28439
AUV61429.1 MG835450_p20 hypothetical protein singleton unknown function unknown function 1 15242 15502
AUV61411.1 MG835450_p2 large terminase phrog_9 terminase large subunit head and packaging 1 528 2039
AUV61443.1 MG835450_p34 lambda exonuclease singleton unknown function unknown function 1 19695 20288
AUV61457.1 MG835450_p48 hypothetical protein singleton unknown function unknown function 1 27012 27170
AUV61413.1 MG835450_p4 portal phrog_12 portal protein head and packaging 1 2175 3539
AUV61416.1 MG835450_p7 hypothetical protein singleton unknown function unknown function 1 5263 5424
AUV61438.1 MG835450_p29 HTH protein singleton unknown function unknown function -1 18564 18767
AUV61436.1 MG835450_p27 hypothetical protein phrog_22774 unknown function unknown function 1 17895 18125
AUV61418.1 MG835450_p9 major capsid protein phrog_10 major head protein head and packaging 1 5764 6909
AUV61452.1 MG835450_p43 RepO phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 23804 24610
AUV61447.1 MG835450_p38 hypothetical protein singleton unknown function unknown function 1 22076 22297
AUV61437.1 MG835450_p28 holin phrog_565 holin lysis 1 18115 18378
AUV61421.1 MG835450_p12 GT2 family glycosyltransferase phrog_29879 galactosyl transferase moron, auxiliary metabolic gene and host takeover 1 8698 9351
AUV61414.1 MG835450_p5 hypothetical protein singleton unknown function unknown function 1 3536 3805
AUV61432.1 MG835450_p23 hypothetical protein singleton unknown function unknown function 1 16560 16739
AUV61428.1 MG835450_p19 tail fiber singleton unknown function unknown function 1 14044 15231
AUV61459.1 MG835450_p50 hypothetical protein singleton unknown function unknown function 1 27707 27937
AUV61430.1 MG835450_p21 virion structural protein phrog_1276 unknown function unknown function 1 15509 15844
AUV61464.1 MG835450_p55 hypothetical protein singleton unknown function unknown function 1 30364 30543
AUV61451.1 MG835450_p42 HNH nuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 23228 23680
AUV61424.1 MG835450_p15 tail tube phrog_4574 major tail protein tail 1 10393 10803
AUV61439.1 MG835450_p30 hypothetical protein singleton unknown function unknown function 1 18869 19096
AUV61463.1 MG835450_p54 repair endonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 29181 30350
AUV61453.1 MG835450_p44 replisome organizer singleton unknown function unknown function 1 24607 24939
AUV61427.1 MG835450_p18 tape measure phrog_991 tail length tape measure protein tail 1 11822 14044
AUV61434.1 MG835450_p25 peptidase phrog_3578 endolysin lysis 1 17120 17668
AUV61462.1 MG835450_p53 hypothetical protein singleton unknown function unknown function 1 28943 29188
AUV61441.1 MG835450_p32 hypothetical protein singleton unknown function unknown function 1 19238 19516
AUV61442.1 MG835450_p33 hypothetical protein singleton unknown function unknown function 1 19520 19708
AUV61440.1 MG835450_p31 hypothetical protein singleton unknown function unknown function 1 19093 19248
AUV61431.1 MG835450_p22 hypothetical protein singleton unknown function unknown function 1 16044 16517
AUV61444.1 MG835450_p35 HTH protein singleton unknown function unknown function 1 20328 20603
AUV61456.1 MG835450_p47 hypothetical protein singleton unknown function unknown function 1 26392 26604
AUV61426.1 MG835450_p17 hypothetical protein singleton unknown function unknown function 1 11169 11822
AUV61449.1 MG835450_p40 hypothetical protein singleton unknown function unknown function 1 22751 22909
AUV61465.1 MG835450_p56 hypothetical protein singleton unknown function unknown function 1 30570 30683
AUV61433.1 MG835450_p24 hypothetical protein phrog_7759 unknown function unknown function 1 16753 17133
AUV61412.1 MG835450_p3 hypothetical protein phrog_7105 unknown function unknown function 1 2047 2175
AUV61420.1 MG835450_p11 SAM dependent methyltransferase phrog_32762 SAM-dependent methyltransferase other -1 8162 8680
AUV61445.1 MG835450_p36 hypothetical protein singleton unknown function unknown function 1 20603 21112
AUV61448.1 MG835450_p39 differentiation transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 22294 22554