| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG839022 |
Definition |
Microbacterium phage Ludgate, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ilzatvirus; unclassified Ilzatvirus. |
DB of origin |
NUCCORE |
Length |
41799 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
63.45 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUX83029.1 | MG839022_p5 | scaffolding protein | phrog_4080 | scaffolding protein | head and packaging | 1 | 4108 | 4668 |
| AUX83083.1 | MG839022_p59 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 38813 | 39544 |
| AUX83051.1 | MG839022_p27 | hypothetical protein | phrog_7870 | unknown function | unknown function | 1 | 19891 | 20301 |
| AUX83041.1 | MG839022_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9358 | 11628 |
| AUX83045.1 | MG839022_p21 | hypothetical protein | phrog_4065 | unknown function | unknown function | 1 | 15006 | 15602 |
| AUX83059.1 | MG839022_p35 | nuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24069 | 24362 |
| AUX83040.1 | MG839022_p16 | tail assembly chaperone | phrog_4537 | tail assembly chaperone | tail | 1 | 8962 | 9333 |
| AUX83071.1 | MG839022_p47 | hypothetical protein | phrog_4121 | thymidylate kinase | other | -1 | 33787 | 34368 |
| AUX83082.1 | MG839022_p58 | hypothetical protein | phrog_4304 | unknown function | unknown function | -1 | 38626 | 38811 |
| AUX83050.1 | MG839022_p26 | holin | phrog_1299 | holin | lysis | 1 | 19490 | 19831 |
| AUX83065.1 | MG839022_p41 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 29729 | 31117 |
| AUX83033.1 | MG839022_p9 | hypothetical protein | phrog_4055 | unknown function | unknown function | 1 | 6108 | 6521 |
| AUX83028.1 | MG839022_p4 | capsid maturation protease | phrog_1657 | head morphogenesis | head and packaging | 1 | 3356 | 4024 |
| AUX83038.1 | MG839022_p14 | major tail protein | phrog_2491 | major tail protein | tail | 1 | 7849 | 8349 |
| AUX83084.1 | MG839022_p60 | hypothetical protein | phrog_4158 | unknown function | unknown function | -1 | 39638 | 40024 |
| AUX83042.1 | MG839022_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 11625 | 12398 |
| AUX83054.1 | MG839022_p30 | hypothetical protein | phrog_5430 | unknown function | unknown function | -1 | 20795 | 20953 |
| AUX83080.1 | MG839022_p56 | hypothetical protein | phrog_4816 | unknown function | unknown function | -1 | 38091 | 38285 |
| AUX83077.1 | MG839022_p53 | hypothetical protein | phrog_4634 | unknown function | unknown function | -1 | 37076 | 37381 |
| AUX83034.1 | MG839022_p10 | hypothetical protein | phrog_4111 | unknown function | unknown function | 1 | 6487 | 6903 |
| AUX83053.1 | MG839022_p29 | hypothetical protein | phrog_4552 | unknown function | unknown function | -1 | 20628 | 20798 |
| AUX83074.1 | MG839022_p50 | hypothetical protein | phrog_4198 | unknown function | unknown function | -1 | 35605 | 35901 |
| AUX83081.1 | MG839022_p57 | hypothetical protein | phrog_4626 | unknown function | unknown function | -1 | 38324 | 38629 |
| AUX83070.1 | MG839022_p46 | hypothetical protein | phrog_4086 | unknown function | unknown function | -1 | 33084 | 33809 |
| AUX83060.1 | MG839022_p36 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 24366 | 25205 |
| AUX83072.1 | MG839022_p48 | glycosyltransferase | phrog_4519 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 34384 | 35316 |
| AUX83031.1 | MG839022_p7 | hypothetical protein | phrog_5501 | unknown function | unknown function | 1 | 5631 | 5873 |
| AUX83066.1 | MG839022_p42 | phosphodiesterase | phrog_755 | RNA ligase | DNA, RNA and nucleotide metabolism | -1 | 31117 | 31710 |
| AUX83047.1 | MG839022_p23 | minor tail protein | phrog_3432 | minor tail protein | tail | 1 | 16090 | 18225 |
| AUX83068.1 | MG839022_p44 | hypothetical protein | phrog_4570 | unknown function | unknown function | -1 | 32003 | 32281 |
| AUX83056.1 | MG839022_p32 | hypothetical protein | phrog_8629 | unknown function | unknown function | -1 | 21836 | 22174 |
| AUX83027.1 | MG839022_p3 | portal protein | phrog_4142 | portal protein | head and packaging | 1 | 1953 | 3350 |
| AUX83025.1 | MG839022_p1 | hypothetical protein | phrog_3678 | unknown function | unknown function | 1 | 1 | 525 |
| AUX83079.1 | MG839022_p55 | hypothetical protein | phrog_3939 | unknown function | unknown function | -1 | 37703 | 37999 |
| AUX83048.1 | MG839022_p24 | lysin A | phrog_2649 | endolysin | lysis | 1 | 18255 | 19061 |
| AUX83075.1 | MG839022_p51 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 35898 | 36665 |
| AUX83086.1 | MG839022_p62 | hypothetical protein | phrog_4674 | unknown function | unknown function | -1 | 40377 | 40610 |
| AUX83046.1 | MG839022_p22 | hypothetical protein | phrog_4108 | unknown function | unknown function | 1 | 15602 | 16090 |
| AUX83061.1 | MG839022_p37 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 25238 | 25906 |
| AUX83058.1 | MG839022_p34 | DNA recombinase | phrog_3123 | unknown function | unknown function | -1 | 22423 | 24093 |
| AUX83069.1 | MG839022_p45 | nucleotide pyrophosphohydrolase | phrog_4159 | nucleotide pyrophosphohydrolase | other | -1 | 32281 | 33087 |
| AUX83026.1 | MG839022_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 522 | 1922 |
| AUX83063.1 | MG839022_p39 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27065 | 28930 |
| AUX83030.1 | MG839022_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4708 | 5634 |
| AUX83064.1 | MG839022_p40 | hypothetical protein | phrog_4077 | unknown function | unknown function | -1 | 29130 | 29558 |
| AUX83044.1 | MG839022_p20 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 14824 | 15009 |
| AUX83052.1 | MG839022_p28 | hypothetical protein | phrog_4288 | unknown function | unknown function | -1 | 20369 | 20557 |
| AUX83043.1 | MG839022_p19 | minor tail protein | phrog_3475 | minor tail protein | tail | 1 | 12398 | 14824 |
| AUX83087.1 | MG839022_p63 | hypothetical protein | phrog_4232 | unknown function | unknown function | 1 | 40974 | 41615 |
| AUX83032.1 | MG839022_p8 | hypothetical protein | phrog_8662 | unknown function | unknown function | 1 | 5945 | 6079 |
| AUX83078.1 | MG839022_p54 | hypothetical protein | phrog_4068 | unknown function | unknown function | -1 | 37365 | 37631 |
| AUX83037.1 | MG839022_p13 | hypothetical protein | phrog_4058 | unknown function | unknown function | 1 | 7600 | 7836 |
| AUX83067.1 | MG839022_p43 | hypothetical protein | phrog_4283 | unknown function | unknown function | -1 | 31707 | 32003 |
| AUX83055.1 | MG839022_p31 | hypothetical protein | phrog_4265 | unknown function | unknown function | -1 | 20950 | 21792 |
| AUX83039.1 | MG839022_p15 | tail assembly chaperone | phrog_4129 | tail assembly chaperone | tail | 1 | 8378 | 8947 |
| AUX83049.1 | MG839022_p25 | membrane protein | phrog_4153 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19096 | 19485 |
| AUX83062.1 | MG839022_p38 | exonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25903 | 27078 |
| AUX83036.1 | MG839022_p12 | hypothetical protein | phrog_4076 | unknown function | unknown function | 1 | 7244 | 7603 |
| AUX83057.1 | MG839022_p33 | hypothetical protein | phrog_4669 | unknown function | unknown function | -1 | 22184 | 22426 |
| AUX83073.1 | MG839022_p49 | hypothetical protein | phrog_5300 | unknown function | unknown function | -1 | 35309 | 35542 |
| AUX83076.1 | MG839022_p52 | hypothetical protein | phrog_4607 | unknown function | unknown function | -1 | 36785 | 37015 |
| AUX83035.1 | MG839022_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6900 | 7241 |
| AUX83085.1 | MG839022_p61 | hypothetical protein | phrog_4362 | unknown function | unknown function | -1 | 40021 | 40380 |