Genomic map of Microbacterium phage Ludgate (MG839022)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG839022
Definition
Microbacterium phage Ludgate, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ilzatvirus; unclassified Ilzatvirus.
DB of origin
NUCCORE
Length
41799
Host Name
Microbacterium foliorum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
63.45
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUX83029.1 MG839022_p5 scaffolding protein phrog_4080 scaffolding protein head and packaging 1 4108 4668
AUX83083.1 MG839022_p59 hypothetical protein phrog_421 unknown function unknown function -1 38813 39544
AUX83051.1 MG839022_p27 hypothetical protein phrog_7870 unknown function unknown function 1 19891 20301
AUX83041.1 MG839022_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 9358 11628
AUX83045.1 MG839022_p21 hypothetical protein phrog_4065 unknown function unknown function 1 15006 15602
AUX83059.1 MG839022_p35 nuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 24069 24362
AUX83040.1 MG839022_p16 tail assembly chaperone phrog_4537 tail assembly chaperone tail 1 8962 9333
AUX83071.1 MG839022_p47 hypothetical protein phrog_4121 thymidylate kinase other -1 33787 34368
AUX83082.1 MG839022_p58 hypothetical protein phrog_4304 unknown function unknown function -1 38626 38811
AUX83050.1 MG839022_p26 holin phrog_1299 holin lysis 1 19490 19831
AUX83065.1 MG839022_p41 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 29729 31117
AUX83033.1 MG839022_p9 hypothetical protein phrog_4055 unknown function unknown function 1 6108 6521
AUX83028.1 MG839022_p4 capsid maturation protease phrog_1657 head morphogenesis head and packaging 1 3356 4024
AUX83038.1 MG839022_p14 major tail protein phrog_2491 major tail protein tail 1 7849 8349
AUX83084.1 MG839022_p60 hypothetical protein phrog_4158 unknown function unknown function -1 39638 40024
AUX83042.1 MG839022_p18 minor tail protein phrog_33 distal tail protein Dit tail 1 11625 12398
AUX83054.1 MG839022_p30 hypothetical protein phrog_5430 unknown function unknown function -1 20795 20953
AUX83080.1 MG839022_p56 hypothetical protein phrog_4816 unknown function unknown function -1 38091 38285
AUX83077.1 MG839022_p53 hypothetical protein phrog_4634 unknown function unknown function -1 37076 37381
AUX83034.1 MG839022_p10 hypothetical protein phrog_4111 unknown function unknown function 1 6487 6903
AUX83053.1 MG839022_p29 hypothetical protein phrog_4552 unknown function unknown function -1 20628 20798
AUX83074.1 MG839022_p50 hypothetical protein phrog_4198 unknown function unknown function -1 35605 35901
AUX83081.1 MG839022_p57 hypothetical protein phrog_4626 unknown function unknown function -1 38324 38629
AUX83070.1 MG839022_p46 hypothetical protein phrog_4086 unknown function unknown function -1 33084 33809
AUX83060.1 MG839022_p36 hypothetical protein phrog_3724 unknown function unknown function -1 24366 25205
AUX83072.1 MG839022_p48 glycosyltransferase phrog_4519 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 34384 35316
AUX83031.1 MG839022_p7 hypothetical protein phrog_5501 unknown function unknown function 1 5631 5873
AUX83066.1 MG839022_p42 phosphodiesterase phrog_755 RNA ligase DNA, RNA and nucleotide metabolism -1 31117 31710
AUX83047.1 MG839022_p23 minor tail protein phrog_3432 minor tail protein tail 1 16090 18225
AUX83068.1 MG839022_p44 hypothetical protein phrog_4570 unknown function unknown function -1 32003 32281
AUX83056.1 MG839022_p32 hypothetical protein phrog_8629 unknown function unknown function -1 21836 22174
AUX83027.1 MG839022_p3 portal protein phrog_4142 portal protein head and packaging 1 1953 3350
AUX83025.1 MG839022_p1 hypothetical protein phrog_3678 unknown function unknown function 1 1 525
AUX83079.1 MG839022_p55 hypothetical protein phrog_3939 unknown function unknown function -1 37703 37999
AUX83048.1 MG839022_p24 lysin A phrog_2649 endolysin lysis 1 18255 19061
AUX83075.1 MG839022_p51 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 35898 36665
AUX83086.1 MG839022_p62 hypothetical protein phrog_4674 unknown function unknown function -1 40377 40610
AUX83046.1 MG839022_p22 hypothetical protein phrog_4108 unknown function unknown function 1 15602 16090
AUX83061.1 MG839022_p37 AAA-ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25238 25906
AUX83058.1 MG839022_p34 DNA recombinase phrog_3123 unknown function unknown function -1 22423 24093
AUX83069.1 MG839022_p45 nucleotide pyrophosphohydrolase phrog_4159 nucleotide pyrophosphohydrolase other -1 32281 33087
AUX83026.1 MG839022_p2 terminase phrog_38 terminase large subunit head and packaging 1 522 1922
AUX83063.1 MG839022_p39 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27065 28930
AUX83030.1 MG839022_p6 major capsid protein phrog_10 major head protein head and packaging 1 4708 5634
AUX83064.1 MG839022_p40 hypothetical protein phrog_4077 unknown function unknown function -1 29130 29558
AUX83044.1 MG839022_p20 hypothetical protein phrog_3473 unknown function unknown function 1 14824 15009
AUX83052.1 MG839022_p28 hypothetical protein phrog_4288 unknown function unknown function -1 20369 20557
AUX83043.1 MG839022_p19 minor tail protein phrog_3475 minor tail protein tail 1 12398 14824
AUX83087.1 MG839022_p63 hypothetical protein phrog_4232 unknown function unknown function 1 40974 41615
AUX83032.1 MG839022_p8 hypothetical protein phrog_8662 unknown function unknown function 1 5945 6079
AUX83078.1 MG839022_p54 hypothetical protein phrog_4068 unknown function unknown function -1 37365 37631
AUX83037.1 MG839022_p13 hypothetical protein phrog_4058 unknown function unknown function 1 7600 7836
AUX83067.1 MG839022_p43 hypothetical protein phrog_4283 unknown function unknown function -1 31707 32003
AUX83055.1 MG839022_p31 hypothetical protein phrog_4265 unknown function unknown function -1 20950 21792
AUX83039.1 MG839022_p15 tail assembly chaperone phrog_4129 tail assembly chaperone tail 1 8378 8947
AUX83049.1 MG839022_p25 membrane protein phrog_4153 membrane protein moron, auxiliary metabolic gene and host takeover 1 19096 19485
AUX83062.1 MG839022_p38 exonuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 25903 27078
AUX83036.1 MG839022_p12 hypothetical protein phrog_4076 unknown function unknown function 1 7244 7603
AUX83057.1 MG839022_p33 hypothetical protein phrog_4669 unknown function unknown function -1 22184 22426
AUX83073.1 MG839022_p49 hypothetical protein phrog_5300 unknown function unknown function -1 35309 35542
AUX83076.1 MG839022_p52 hypothetical protein phrog_4607 unknown function unknown function -1 36785 37015
AUX83035.1 MG839022_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6900 7241
AUX83085.1 MG839022_p61 hypothetical protein phrog_4362 unknown function unknown function -1 40021 40380