| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG845393 |
Definition |
Gordonia phage Beenie, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
47953 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
73 |
%GC |
66.26 |
Number of singletons |
8 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV61613.1 | MG845393_p48 | ssDNA binding domain protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 37101 | 38252 |
| AUV61621.1 | MG845393_p56 | hypothetical protein | phrog_1138 | unknown function | unknown function | 1 | 40503 | 41057 |
| AUV61627.1 | MG845393_p62 | DNA binding domain protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43030 | 44043 |
| AUV61598.1 | MG845393_p33 | integrase | phrog_1 | integrase | integration and excision | 1 | 29179 | 30306 |
| AUV61622.1 | MG845393_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41057 | 41194 |
| AUV61584.1 | MG845393_p19 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16864 | 17706 |
| AUV61629.1 | MG845393_p64 | hypothetical protein | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 44525 | 44890 |
| AUV61637.1 | MG845393_p72 | hypothetical protein | phrog_32262 | unknown function | unknown function | 1 | 47247 | 47516 |
| AUV61634.1 | MG845393_p69 | helix-turn-helix DNA binding protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 46326 | 46541 |
| AUV61618.1 | MG845393_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39615 | 39848 |
| AUV61600.1 | MG845393_p35 | DNA binding domain protein | phrog_87 | metallo-protease | other | -1 | 30507 | 30755 |
| AUV61582.1 | MG845393_p17 | hypothetical protein | phrog_19756 | unknown function | unknown function | -1 | 9728 | 10255 |
| AUV61578.1 | MG845393_p12 | hypothetical protein | phrog_2595 | head-tail connector protein | connector | 1 | 7677 | 8117 |
| AUV61592.1 | MG845393_p27 | minor tail protein | singleton | unknown function | unknown function | 1 | 24076 | 26388 |
| AUV61589.1 | MG845393_p24 | hypothetical protein | phrog_798 | unknown function | unknown function | 1 | 21100 | 21606 |
| AUV61619.1 | MG845393_p54 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 39845 | 40141 |
| AUV61606.1 | MG845393_p41 | hypothetical protein | phrog_21001 | unknown function | unknown function | 1 | 34382 | 34801 |
| AUV61575.1 | MG845393_p9 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6592 | 6975 |
| AUV61604.1 | MG845393_p39 | hypothetical protein | phrog_12920 | unknown function | unknown function | 1 | 33102 | 33449 |
| AUV61583.1 | MG845393_p18 | tape measure protein | phrog_7025 | tail length tape measure protein | tail | 1 | 10603 | 16863 |
| AUV61635.1 | MG845393_p70 | hypothetical protein | phrog_9543 | unknown function | unknown function | 1 | 46538 | 46939 |
| AUV61571.1 | MG845393_p5 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3743 | 4951 |
| AUV61626.1 | MG845393_p61 | HNH endonuclease | phrog_14314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42455 | 43030 |
| AUV61632.1 | MG845393_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45320 | 45547 |
| AUV61576.1 | MG845393_p10 | hypothetical protein | phrog_3881 | head-tail connector protein | connector | 1 | 7004 | 7339 |
| AUV61630.1 | MG845393_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44887 | 45036 |
| AUV61639.1 | MG845393_p16 | tail assembly chaperone | phrog_3860 | tail assembly chaperone | tail | 1 | 8840 | 9493 |
| AUV61603.1 | MG845393_p38 | helix-turn-helix DNA binding protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32797 | 33105 |
| AUV61602.1 | MG845393_p37 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 31826 | 32686 |
| AUV61572.1 | MG845393_p6 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4955 | 5317 |
| AUV61587.1 | MG845393_p22 | membrane protein | phrog_31213 | unknown function | unknown function | 1 | 20437 | 20817 |
| AUV61607.1 | MG845393_p42 | hypothetical protein | phrog_7723 | unknown function | unknown function | 1 | 34798 | 35025 |
| AUV61574.1 | MG845393_p8 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6244 | 6585 |
| AUV61569.1 | MG845393_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 820 | 2379 |
| AUV61567.1 | MG845393_p1 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47 | 517 |
| AUV61620.1 | MG845393_p55 | hypothetical protein | phrog_26835 | unknown function | unknown function | 1 | 40138 | 40506 |
| AUV61601.1 | MG845393_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31083 | 31829 |
| AUV61590.1 | MG845393_p25 | lysin B | phrog_102 | endolysin | lysis | 1 | 21603 | 22391 |
| AUV61585.1 | MG845393_p20 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17703 | 19283 |
| AUV61581.1 | MG845393_p15 | tail assembly chaperone | phrog_3860 | tail assembly chaperone | tail | 1 | 8840 | 9762 |
| AUV61597.1 | MG845393_p32 | hypothetical protein | phrog_34494 | unknown function | unknown function | 1 | 29012 | 29179 |
| AUV61628.1 | MG845393_p63 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 44040 | 44528 |
| AUV61605.1 | MG845393_p40 | antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 33513 | 34385 |
| AUV61593.1 | MG845393_p28 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 26447 | 26674 |
| AUV61614.1 | MG845393_p49 | membrane protein | phrog_32096 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 38249 | 38536 |
| AUV61616.1 | MG845393_p51 | hypothetical protein | phrog_8105 | unknown function | unknown function | 1 | 38991 | 39326 |
| AUV61591.1 | MG845393_p26 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 22391 | 24076 |
| AUV61625.1 | MG845393_p60 | hypothetical protein | phrog_10621 | unknown function | unknown function | 1 | 42143 | 42337 |
| AUV61610.1 | MG845393_p45 | hypothetical protein | phrog_6877 | unknown function | unknown function | 1 | 35601 | 35957 |
| AUV61612.1 | MG845393_p47 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 36265 | 37104 |
| AUV61577.1 | MG845393_p11 | hypothetical protein | phrog_556 | minor head protein | head and packaging | 1 | 7351 | 7680 |
| AUV61623.1 | MG845393_p58 | hypothetical protein | phrog_7793 | unknown function | unknown function | 1 | 41191 | 41307 |
| AUV61638.1 | MG845393_p73 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47518 | 47826 |
| AUV61586.1 | MG845393_p21 | lysin A | phrog_2998 | endolysin | lysis | 1 | 19312 | 20412 |
| AUV61595.1 | MG845393_p30 | integrase | phrog_1 | integrase | integration and excision | 1 | 27395 | 28312 |
| AUV61594.1 | MG845393_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26886 | 27020 |
| AUV61608.1 | MG845393_p43 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 35022 | 35300 |
| AUV61579.1 | MG845393_p13 | major tail protein | phrog_3884 | major tail protein | tail | 1 | 8119 | 8637 |
| AUV61580.1 | MG845393_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8643 | 8774 |
| AUV61599.1 | MG845393_p34 | helix-turn-helix DNA binding protein | phrog_5316 | unknown function | unknown function | -1 | 30284 | 30514 |
| AUV61631.1 | MG845393_p66 | hypothetical protein | phrog_36536 | unknown function | unknown function | 1 | 45033 | 45323 |
| AUV61573.1 | MG845393_p7 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5345 | 6268 |
| AUV61617.1 | MG845393_p52 | hypothetical protein | phrog_14378 | unknown function | unknown function | 1 | 39328 | 39618 |
| AUV61633.1 | MG845393_p68 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 45544 | 46218 |
| AUV61636.1 | MG845393_p71 | hypothetical protein | phrog_10381 | unknown function | unknown function | 1 | 46939 | 47247 |
| AUV61596.1 | MG845393_p31 | hypothetical protein | phrog_35716 | unknown function | unknown function | 1 | 28633 | 28971 |
| AUV61570.1 | MG845393_p4 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2412 | 3749 |
| AUV61609.1 | MG845393_p44 | hypothetical protein | phrog_9213 | unknown function | unknown function | 1 | 35297 | 35515 |
| AUV61611.1 | MG845393_p46 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 35954 | 36268 |
| AUV61615.1 | MG845393_p50 | hypothetical protein | phrog_15664 | unknown function | unknown function | 1 | 38533 | 38994 |
| AUV61588.1 | MG845393_p23 | membrane protein | phrog_38409 | unknown function | unknown function | 1 | 20870 | 21103 |
| AUV61568.1 | MG845393_p2 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 486 | 848 |
| AUV61624.1 | MG845393_p59 | DNA binding protein | phrog_1590 | unknown function | unknown function | 1 | 41304 | 42143 |