Genomic map of Escherichia phage YZ1 (MG845865)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG845865
Definition
Escherichia phage YZ1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus YZ1.
DB of origin
NUCCORE
Length
38823
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
41
%GC
50.37
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUX83622.1 MG845865_p34 core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 28132 32019
AUX83619.1 MG845865_p31 internal virion protein phrog_308 internal virion protein head and packaging 1 24791 25261
AUX83629.1 MG845865_p41 hypothetical protein phrog_2193 unknown function unknown function 1 38427 38585
AUX83596.1 MG845865_p8 hypothetical protein phrog_4383 unknown function unknown function 1 5264 5443
AUX83600.1 MG845865_p12 inhibitor RNA polymerase phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 7777 7935
AUX83615.1 MG845865_p27 scaffold protein phrog_1052 head assembly head and packaging 1 19513 20397
AUX83626.1 MG845865_p38 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35536 35937
AUX83610.1 MG845865_p22 hypothetical protein phrog_4382 unknown function unknown function 1 15141 15590
AUX83625.1 MG845865_p37 DNA packaging protein phrog_1351 terminase small subunit head and packaging 1 35210 35473
AUX83590.1 MG845865_p2 hypothetical protein phrog_11084 unknown function unknown function 1 778 1302
AUX83601.1 MG845865_p13 ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7994 8692
AUX83614.1 MG845865_p26 head to tail connector phrog_449 head-tail adaptor connector 1 17836 19404
AUX83603.1 MG845865_p15 RNA polymerase inhibitor phrog_822 amidase lysis 1 9358 9816
AUX83605.1 MG845865_p17 primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 10125 11825
AUX83618.1 MG845865_p30 tail tube phrog_457 tail protein tail 1 22357 24714
AUX83608.1 MG845865_p20 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 14651 14938
AUX83628.1 MG845865_p40 DNA packaging protein phrog_38 terminase large subunit head and packaging 1 36400 38130
AUX83602.1 MG845865_p14 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 8692 9144
AUX83627.1 MG845865_p39 endopeptidase phrog_1327 Rz-like spanin lysis 1 35918 36370
AUX83591.1 MG845865_p3 hypothetical protein phrog_5058 unknown function unknown function 1 1296 1445
AUX83621.1 MG845865_p33 core protein phrog_1339 internal virion protein head and packaging 1 25845 28127
AUX83609.1 MG845865_p21 hypothetical protein phrog_1334 unknown function unknown function 1 14935 15144
AUX83595.1 MG845865_p7 hypothetical protein phrog_8082 unknown function unknown function 1 4874 5089
AUX83598.1 MG845865_p10 hypothetical protein phrog_1777 unknown function unknown function 1 6902 7156
AUX83613.1 MG845865_p25 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17573 17824
AUX83624.1 MG845865_p36 lysis protein phrog_920 holin lysis 1 35019 35213
AUX83589.1 MG845865_p1 hypothetical protein singleton unknown function unknown function 1 339 560
AUX83611.1 MG845865_p23 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15580 16449
AUX83616.1 MG845865_p28 capsid protein phrog_267 major head protein head and packaging 1 20524 21567
AUX83612.1 MG845865_p24 hypothetical protein phrog_1447 unknown function unknown function 1 16660 16932
AUX83593.1 MG845865_p5 hypothetical protein phrog_7066 unknown function unknown function 1 1817 2080
AUX83623.1 MG845865_p35 hypothetical protein phrog_1171 tail spike protein tail 1 32085 35003
AUX83620.1 MG845865_p32 internal virion protein phrog_805 internal virion protein head and packaging 1 25246 25833
AUX83606.1 MG845865_p18 hypothetical protein phrog_13039 unknown function unknown function 1 11877 12041
AUX83594.1 MG845865_p6 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2178 4859
AUX83592.1 MG845865_p4 hypothetical protein phrog_2385 unknown function unknown function 1 1620 1817
AUX83607.1 MG845865_p19 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 12078 14276
AUX83604.1 MG845865_p16 hypothetical protein phrog_1950 unknown function unknown function 1 9841 10056
AUX83597.1 MG845865_p9 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 5698 6771
AUX83599.1 MG845865_p11 nucleotide kinase phrog_2585 nucleotide kinase other 1 7225 7698
AUX83617.1 MG845865_p29 tail tube phrog_446 tail protein tail 1 21791 22357