| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG845865 |
Definition |
Escherichia phage YZ1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus YZ1. |
DB of origin |
NUCCORE |
Length |
38823 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
41 |
%GC |
50.37 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUX83622.1 | MG845865_p34 | core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 28132 | 32019 |
| AUX83619.1 | MG845865_p31 | internal virion protein | phrog_308 | internal virion protein | head and packaging | 1 | 24791 | 25261 |
| AUX83629.1 | MG845865_p41 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 38427 | 38585 |
| AUX83596.1 | MG845865_p8 | hypothetical protein | phrog_4383 | unknown function | unknown function | 1 | 5264 | 5443 |
| AUX83600.1 | MG845865_p12 | inhibitor RNA polymerase | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 7777 | 7935 |
| AUX83615.1 | MG845865_p27 | scaffold protein | phrog_1052 | head assembly | head and packaging | 1 | 19513 | 20397 |
| AUX83626.1 | MG845865_p38 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35536 | 35937 |
| AUX83610.1 | MG845865_p22 | hypothetical protein | phrog_4382 | unknown function | unknown function | 1 | 15141 | 15590 |
| AUX83625.1 | MG845865_p37 | DNA packaging protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35210 | 35473 |
| AUX83590.1 | MG845865_p2 | hypothetical protein | phrog_11084 | unknown function | unknown function | 1 | 778 | 1302 |
| AUX83601.1 | MG845865_p13 | ssDNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7994 | 8692 |
| AUX83614.1 | MG845865_p26 | head to tail connector | phrog_449 | head-tail adaptor | connector | 1 | 17836 | 19404 |
| AUX83603.1 | MG845865_p15 | RNA polymerase inhibitor | phrog_822 | amidase | lysis | 1 | 9358 | 9816 |
| AUX83605.1 | MG845865_p17 | primase/helicase protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 10125 | 11825 |
| AUX83618.1 | MG845865_p30 | tail tube | phrog_457 | tail protein | tail | 1 | 22357 | 24714 |
| AUX83608.1 | MG845865_p20 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 14651 | 14938 |
| AUX83628.1 | MG845865_p40 | DNA packaging protein | phrog_38 | terminase large subunit | head and packaging | 1 | 36400 | 38130 |
| AUX83602.1 | MG845865_p14 | endonuclease I | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8692 | 9144 |
| AUX83627.1 | MG845865_p39 | endopeptidase | phrog_1327 | Rz-like spanin | lysis | 1 | 35918 | 36370 |
| AUX83591.1 | MG845865_p3 | hypothetical protein | phrog_5058 | unknown function | unknown function | 1 | 1296 | 1445 |
| AUX83621.1 | MG845865_p33 | core protein | phrog_1339 | internal virion protein | head and packaging | 1 | 25845 | 28127 |
| AUX83609.1 | MG845865_p21 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 14935 | 15144 |
| AUX83595.1 | MG845865_p7 | hypothetical protein | phrog_8082 | unknown function | unknown function | 1 | 4874 | 5089 |
| AUX83598.1 | MG845865_p10 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 6902 | 7156 |
| AUX83613.1 | MG845865_p25 | hypothetical protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 17573 | 17824 |
| AUX83624.1 | MG845865_p36 | lysis protein | phrog_920 | holin | lysis | 1 | 35019 | 35213 |
| AUX83589.1 | MG845865_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 339 | 560 |
| AUX83611.1 | MG845865_p23 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15580 | 16449 |
| AUX83616.1 | MG845865_p28 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 20524 | 21567 |
| AUX83612.1 | MG845865_p24 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 16660 | 16932 |
| AUX83593.1 | MG845865_p5 | hypothetical protein | phrog_7066 | unknown function | unknown function | 1 | 1817 | 2080 |
| AUX83623.1 | MG845865_p35 | hypothetical protein | phrog_1171 | tail spike protein | tail | 1 | 32085 | 35003 |
| AUX83620.1 | MG845865_p32 | internal virion protein | phrog_805 | internal virion protein | head and packaging | 1 | 25246 | 25833 |
| AUX83606.1 | MG845865_p18 | hypothetical protein | phrog_13039 | unknown function | unknown function | 1 | 11877 | 12041 |
| AUX83594.1 | MG845865_p6 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2178 | 4859 |
| AUX83592.1 | MG845865_p4 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 1620 | 1817 |
| AUX83607.1 | MG845865_p19 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12078 | 14276 |
| AUX83604.1 | MG845865_p16 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 9841 | 10056 |
| AUX83597.1 | MG845865_p9 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 5698 | 6771 |
| AUX83599.1 | MG845865_p11 | nucleotide kinase | phrog_2585 | nucleotide kinase | other | 1 | 7225 | 7698 |
| AUX83617.1 | MG845865_p29 | tail tube | phrog_446 | tail protein | tail | 1 | 21791 | 22357 |