Genomic map of Gordonia phage Confidence (MG872834)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG872834
Definition
Gordonia phage Confidence, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
50646
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
66.35
Number of singletons
8
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVI03675.1 MG872834_p45 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 33363 34235
AVI03667.1 MG872834_p37 integrase phrog_1 integrase integration and excision 1 29321 30403
AVI03662.1 MG872834_p31 hypothetical protein phrog_15183 unknown function unknown function 1 26960 27280
AVI03634.1 MG872834_p3 portal protein phrog_104 portal protein head and packaging 1 2281 3729
AVI03688.1 MG872834_p58 ssDNA binding protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39325 40473
AVI03656.1 MG872834_p25 membrane protein phrog_10261 membrane protein moron, auxiliary metabolic gene and host takeover 1 21361 21819
AVI03644.1 MG872834_p13 head-to-tail connector complex protein phrog_123 tail terminator connector 1 8263 8649
AVI03648.1 MG872834_p17 hypothetical protein phrog_19756 unknown function unknown function -1 10494 10949
AVI03638.1 MG872834_p7 major capsid protein phrog_29 major head protein head and packaging 1 5700 6740
AVI03669.1 MG872834_p39 HicA-like toxin singleton unknown function unknown function -1 30632 30772
AVI03633.1 MG872834_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 485 2284
AVI03691.1 MG872834_p61 hypothetical protein phrog_10682 unknown function unknown function 1 41167 41355
AVI03653.1 MG872834_p22 lysin A phrog_2998 endolysin lysis 1 19669 20769
AVI03698.1 MG872834_p68 hypothetical protein phrog_17296 unknown function unknown function 1 44604 45023
AVI03683.1 MG872834_p53 hypothetical protein phrog_210 unknown function unknown function 1 36720 37613
AVI03632.1 MG872834_p1 terminase small subunit phrog_226 minor tail protein tail 1 82 504
AVI03635.1 MG872834_p4 capsid maturation protease phrog_193 head maturation protease head and packaging 1 3710 4522
AVI03702.1 MG872834_p72 hypothetical protein phrog_11256 DNA binding protein DNA, RNA and nucleotide metabolism 1 46779 47603
AVI03709.1 MG872834_p79 hypothetical protein phrog_31833 unknown function unknown function 1 50116 50301
AVI03707.1 MG872834_p77 hypothetical protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 49429 49755
AVI03692.1 MG872834_p62 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 41352 42137
AVI03645.1 MG872834_p14 major tail protein phrog_117 major tail protein tail 1 8711 9556
AVI03661.1 MG872834_p30 hypothetical protein phrog_6153 unknown function unknown function -1 26683 26910
AVI03652.1 MG872834_p21 hypothetical protein phrog_17401 unknown function unknown function 1 19266 19601
AVI03701.1 MG872834_p71 hypothetical protein phrog_6055 unknown function unknown function 1 46288 46782
AVI03710.1 MG872834_p32 hypothetical protein singleton unknown function unknown function 1 27302 27379
AVI03650.1 MG872834_p19 minor tail protein phrog_106 minor tail protein tail 1 16655 17563
AVI03679.1 MG872834_p49 hypothetical protein phrog_1840 excisionase integration and excision 1 35366 35653
AVI03681.1 MG872834_p51 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 35894 36283
AVI03690.1 MG872834_p60 hypothetical protein phrog_10709 unknown function unknown function 1 40997 41170
AVI03654.1 MG872834_p23 hypothetical protein phrog_443 holin lysis 1 20796 21032
AVI03649.1 MG872834_p18 tape measure protein phrog_10780 tail length tape measure protein tail 1 10997 16651
AVI03660.1 MG872834_p29 hypothetical protein phrog_17388 minor tail protein tail 1 24635 26650
AVI03708.1 MG872834_p78 hypothetical protein phrog_26578 unknown function unknown function 1 49927 50109
AVI03647.1 MG872834_p15 tail assembly chaperone phrog_28033 tail assembly chaperone tail 1 9683 10497
AVI03694.1 MG872834_p64 HTH DNA binding protein phrog_1590 unknown function unknown function 1 42274 43167
AVI03704.1 MG872834_p74 hypothetical protein phrog_14446 unknown function unknown function 1 47962 48363
AVI03646.1 MG872834_p16 tail assembly chaperone phrog_23607 tail assembly chaperone tail 1 9683 10090
AVI03685.1 MG872834_p55 hypothetical protein phrog_6877 unknown function unknown function 1 37810 38172
AVI03674.1 MG872834_p44 hypothetical protein phrog_12920 unknown function unknown function 1 32986 33315
AVI03676.1 MG872834_p46 hypothetical protein phrog_2233 unknown function unknown function 1 34232 34837
AVI03671.1 MG872834_p41 hypothetical protein phrog_87 metallo-protease other -1 31246 31704
AVI03682.1 MG872834_p52 hypothetical protein phrog_204 unknown function unknown function 1 36375 36716
AVI03677.1 MG872834_p47 hypothetical protein phrog_5253 unknown function unknown function 1 34834 35145
AVI03678.1 MG872834_p48 hypothetical protein phrog_7723 unknown function unknown function 1 35142 35369
AVI03700.1 MG872834_p70 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 45341 46291
AVI03695.1 MG872834_p65 hypothetical protein phrog_2045 unknown function unknown function 1 43164 44039
AVI03689.1 MG872834_p59 hypothetical protein phrog_15664 unknown function unknown function 1 40470 40988
AVI03670.1 MG872834_p40 hypothetical protein phrog_5316 unknown function unknown function -1 31037 31228
AVI03672.1 MG872834_p42 immunity repressor phrog_19579 transcriptional regulator transcription regulation -1 31755 32507
AVI03680.1 MG872834_p50 hypothetical protein phrog_9213 unknown function unknown function 1 35650 35865
AVI03665.1 MG872834_p35 hypothetical protein singleton unknown function unknown function -1 27879 28004
AVI03640.1 MG872834_p9 head-to-tail connector complex protein phrog_2377 head-tail adaptor Ad1 connector 1 7080 7481
AVI03657.1 MG872834_p26 lysin B phrog_102 endolysin lysis 1 21821 22441
AVI03637.1 MG872834_p6 capsid decoration protein phrog_3583 head decoration head and packaging 1 5303 5686
AVI03636.1 MG872834_p5 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 4598 5254
AVI03658.1 MG872834_p27 hypothetical protein phrog_737 minor tail protein tail 1 22438 24309
AVI03703.1 MG872834_p73 resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47600 47965
AVI03663.1 MG872834_p33 hypothetical protein singleton unknown function unknown function -1 27424 27561
AVI03706.1 MG872834_p76 hypothetical protein phrog_1467 unknown function unknown function 1 48755 49432
AVI03639.1 MG872834_p8 hypothetical protein phrog_14250 unknown function unknown function 1 6755 7111
AVI03655.1 MG872834_p24 membrane protein phrog_11800 membrane protein moron, auxiliary metabolic gene and host takeover 1 21095 21364
AVI03651.1 MG872834_p20 minor tail protein phrog_110 minor tail protein tail 1 17560 19266
AVI03668.1 MG872834_p38 HicB-like antitoxin singleton unknown function unknown function -1 30415 30642
AVI03686.1 MG872834_p56 hypothetical protein phrog_2857 tail fiber protein tail 1 38169 38468
AVI03673.1 MG872834_p43 HTH DNA binding protein phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 32753 32989
AVI03696.1 MG872834_p66 hypothetical protein phrog_26108 unknown function unknown function 1 44039 44239
AVI03642.1 MG872834_p11 hypothetical protein phrog_31765 unknown function unknown function 1 7837 8025
AVI03697.1 MG872834_p67 hypothetical protein phrog_464 unknown function unknown function 1 44239 44604
AVI03641.1 MG872834_p10 head-to-tail connector complex protein phrog_763 head-tail adaptor connector 1 7478 7825
AVI03705.1 MG872834_p75 hypothetical protein singleton unknown function unknown function 1 48360 48758
AVI03699.1 MG872834_p69 hypothetical protein phrog_10621 unknown function unknown function 1 45016 45225
AVI03643.1 MG872834_p12 hypothetical protein phrog_387 neck protein connector 1 8009 8266
AVI03684.1 MG872834_p54 hypothetical protein singleton unknown function unknown function 1 37610 37813
AVI03666.1 MG872834_p36 integrase phrog_1 integrase integration and excision 1 28133 29050
AVI03664.1 MG872834_p34 hypothetical protein singleton unknown function unknown function -1 27619 27807
AVI03687.1 MG872834_p57 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 38465 39328
AVI03693.1 MG872834_p63 hypothetical protein phrog_7793 unknown function unknown function 1 42119 42277
AVI03659.1 MG872834_p28 hypothetical protein phrog_8055 unknown function unknown function 1 24306 24635