Genomic map of Mycobacterium phage Gage (MG872837)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG872837
Definition
Mycobacterium phage Gage, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
NUCCORE
Length
71650
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
135
%GC
63.19
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVI03912.1 MG872837_p17 head-to-tail connector phrog_1531 head closure connector 1 9714 10049
AVI03997.1 MG872837_p104 hypothetical protein phrog_1454 unknown function unknown function 1 60933 61130
AVI03932.1 MG872837_p37 lysin B phrog_102 endolysin lysis 1 31848 32705
AVI03955.1 MG872837_p60 pentapeptide repeat protein phrog_923 unknown function unknown function 1 40854 41699
AVI03964.1 MG872837_p70 hypothetical protein phrog_572 unknown function unknown function 1 45309 45719
AVI03903.1 MG872837_p8 hypothetical protein phrog_4101 unknown function unknown function -1 1917 2156
AVI03956.1 MG872837_p61 hypothetical protein phrog_2463 unknown function unknown function 1 41701 41847
AVI04011.1 MG872837_p119 hypothetical protein phrog_3062 unknown function unknown function 1 66723 66977
AVI03899.1 MG872837_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
AVI03980.1 MG872837_p86 hypothetical protein phrog_2747 unknown function unknown function 1 51963 52181
AVI03928.1 MG872837_p33 hypothetical protein phrog_411 unknown function unknown function 1 29273 29557
AVI03938.1 MG872837_p43 hypothetical protein phrog_3472 unknown function unknown function -1 34656 34910
AVI03981.1 MG872837_p87 hypothetical protein phrog_1503 unknown function unknown function 1 52178 52405
AVI03969.1 MG872837_p75 hypothetical protein phrog_572 unknown function unknown function 1 47576 47953
AVI03916.1 MG872837_p21 hypothetical protein phrog_5711 head fiber protein head and packaging 1 11869 12342
AVI03924.1 MG872837_p29 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 24667 27507
AVI03897.1 MG872837_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
AVI03991.1 MG872837_p97 hypothetical protein phrog_889 unknown function unknown function 1 57230 57682
AVI03942.1 MG872837_p47 hypothetical protein phrog_6127 unknown function unknown function -1 35617 35730
AVI03927.1 MG872837_p32 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28955 29140
AVI04015.1 MG872837_p123 hypothetical protein phrog_2296 unknown function unknown function 1 67732 67869
AVI03967.1 MG872837_p73 hypothetical protein phrog_2771 unknown function unknown function 1 46738 47211
AVI03990.1 MG872837_p96 hypothetical protein phrog_2853 unknown function unknown function 1 57075 57233
AVI03992.1 MG872837_p98 hypothetical protein phrog_889 unknown function unknown function 1 57686 58129
AVI04014.1 MG872837_p122 hypothetical protein phrog_2823 unknown function unknown function 1 67535 67735
AVI03904.1 MG872837_p9 hypothetical protein phrog_18713 unknown function unknown function -1 2156 2338
AVI03941.1 MG872837_p46 hypothetical protein phrog_722 unknown function unknown function -1 35295 35624
AVI03923.1 MG872837_p28 minor tail protein phrog_346 minor tail protein tail 1 22274 24670
AVI03922.1 MG872837_p27 minor tail protein phrog_732 minor tail protein tail 1 21436 22257
AVI04020.1 MG872837_p128 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 68960 69349
AVI03948.1 MG872837_p53 hypothetical protein phrog_2759 unknown function unknown function -1 36628 37023
AVI03994.1 MG872837_p100 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58499 58999
AVI04006.1 MG872837_p113 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64249 65034
AVI04030.1 MG872837_p63 hypothetical protein phrog_4633 unknown function unknown function 1 42431 42619
AVI03936.1 MG872837_p41 hypothetical protein phrog_3481 unknown function unknown function -1 34001 34198
AVI03973.1 MG872837_p79 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48769 49086
AVI03986.1 MG872837_p92 hypothetical protein phrog_2844 unknown function unknown function 1 54523 54621
AVI03970.1 MG872837_p76 hypothetical protein phrog_1622 unknown function unknown function 1 47953 48126
AVI03999.1 MG872837_p106 hypothetical protein phrog_2757 unknown function unknown function 1 61484 61774
AVI04021.1 MG872837_p129 hypothetical protein phrog_2772 unknown function unknown function -1 69540 69776
AVI03972.1 MG872837_p78 hypothetical protein phrog_289 GTP-binding domain other 1 48359 48772
AVI04024.1 MG872837_p132 hypothetical protein phrog_8479 unknown function unknown function -1 70192 70386
AVI03953.1 MG872837_p58 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 39968 40267
AVI03906.1 MG872837_p11 hypothetical protein phrog_2845 unknown function unknown function 1 4191 4412
AVI03952.1 MG872837_p57 membrane protein phrog_950 unknown function unknown function -1 39100 39873
AVI03946.1 MG872837_p51 hypothetical protein phrog_2702 unknown function unknown function -1 36248 36463
AVI03901.1 MG872837_p6 hypothetical protein phrog_83 terminase small subunit head and packaging 1 1057 1518
AVI03925.1 MG872837_p30 minor tail protein phrog_553 minor tail protein tail 1 27508 28470
AVI03945.1 MG872837_p50 hypothetical protein phrog_2893 unknown function unknown function -1 36019 36189
AVI03976.1 MG872837_p82 hypothetical protein phrog_572 unknown function unknown function 1 49956 50291
AVI04019.1 MG872837_p127 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 68700 68963
AVI03962.1 MG872837_p68 hypothetical protein phrog_762 unknown function unknown function 1 44018 44347
AVI03987.1 MG872837_p93 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54618 55943
AVI03913.1 MG872837_p18 head-to-tail connector phrog_2805 minor tail protein tail 1 10046 10426
AVI03988.1 MG872837_p94 hypothetical protein phrog_1590 unknown function unknown function 1 55980 56801
AVI03968.1 MG872837_p74 hypothetical protein phrog_1389 unknown function unknown function 1 47211 47579
AVI04012.1 MG872837_p120 hypothetical protein phrog_2174 unknown function unknown function 1 66926 67387
AVI03975.1 MG872837_p81 hypothetical protein phrog_1882 unknown function unknown function 1 49309 49959
AVI03974.1 MG872837_p80 hypothetical protein phrog_1673 unknown function unknown function 1 49076 49312
AVI03950.1 MG872837_p55 integrase phrog_1 integrase integration and excision 1 37863 38744
AVI04002.1 MG872837_p109 hypothetical protein phrog_2846 unknown function unknown function 1 62887 63111
AVI03960.1 MG872837_p66 hypothetical protein phrog_2221 unknown function unknown function 1 43338 43499
AVI04029.1 MG872837_p1 hypothetical protein phrog_3456 unknown function unknown function 1 10 270
AVI03957.1 MG872837_p62 hypothetical protein phrog_2800 unknown function unknown function 1 41844 42122
AVI03965.1 MG872837_p71 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45712 46434
AVI03961.1 MG872837_p67 hypothetical protein phrog_301 secreted protein other 1 43689 44021
AVI03940.1 MG872837_p45 hypothetical protein phrog_3447 unknown function unknown function -1 35086 35298
AVI04026.1 MG872837_p134 hypothetical protein phrog_2762 unknown function unknown function 1 70858 71079
AVI04005.1 MG872837_p112 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 63759 64238
AVI04007.1 MG872837_p114 hypothetical protein phrog_1941 unknown function unknown function 1 65031 65273
AVI03985.1 MG872837_p91 hypothetical protein phrog_2495 unknown function unknown function 1 54158 54526
AVI04027.1 MG872837_p101 endonuclease VII phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 59040 59603
AVI03909.1 MG872837_p14 major capsid protein phrog_10 major head protein head and packaging 1 7356 8831
AVI03898.1 MG872837_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
AVI03949.1 MG872837_p54 membrane protein phrog_2847 unknown function unknown function -1 37310 37612
AVI03959.1 MG872837_p65 hypothetical protein phrog_2147 unknown function unknown function 1 43105 43338
AVI03943.1 MG872837_p48 hypothetical protein phrog_4396 unknown function unknown function -1 35727 35855
AVI04013.1 MG872837_p121 hypothetical protein phrog_2764 unknown function unknown function 1 67384 67551
AVI03939.1 MG872837_p44 hypothetical protein phrog_5831 unknown function unknown function -1 34907 35089
AVI04008.1 MG872837_p115 DNA recombinase phrog_97 UvsX-like recombinase other 1 65281 66243
AVI03996.1 MG872837_p103 protease phrog_94 head maturation protease head and packaging 1 60152 60931
AVI03984.1 MG872837_p90 polynucleotide kinase phrog_505 polynucleotide kinase other 1 53110 54051
AVI04016.1 MG872837_p124 hypothetical protein phrog_2925 unknown function unknown function 1 67866 68045
AVI03914.1 MG872837_p19 head-to-tail connector phrog_813 head-tail adaptor connector 1 10404 10808
AVI03978.1 MG872837_p84 hypothetical protein phrog_1091 unknown function unknown function 1 51543 51731
AVI03979.1 MG872837_p85 WhiB family transcription factor phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51728 51988
AVI04003.1 MG872837_p110 hypothetical protein phrog_1042 unknown function unknown function 1 63108 63371
AVI03944.1 MG872837_p49 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 35855 36022
AVI04018.1 MG872837_p126 hypothetical protein phrog_3016 unknown function unknown function 1 68187 68321
AVI03918.1 MG872837_p22 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 12463 13334
AVI03966.1 MG872837_p72 hypothetical protein phrog_2750 unknown function unknown function 1 46427 46738
AVI04000.1 MG872837_p107 hypothetical protein phrog_1969 unknown function unknown function 1 61779 62090
AVI04017.1 MG872837_p125 hypothetical protein phrog_2897 unknown function unknown function 1 68045 68176
AVI03983.1 MG872837_p89 hypothetical protein phrog_2894 unknown function unknown function 1 52761 52955
AVI03971.1 MG872837_p77 hypothetical protein phrog_2793 unknown function unknown function 1 48129 48362
AVI03937.1 MG872837_p42 hypothetical protein phrog_647 unknown function unknown function -1 34195 34659
AVI03921.1 MG872837_p26 minor tail protein phrog_110 minor tail protein tail 1 19820 21415
AVI04004.1 MG872837_p111 hydrolase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 63382 63756
AVI03917.1 MG872837_p23 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12463 12924
AVI03930.1 MG872837_p35 holin phrog_526 holin lysis 1 31137 31520
AVI03929.1 MG872837_p34 lysin A phrog_317 endolysin lysis 1 29631 31133
AVI03908.1 MG872837_p13 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 5958 7250
AVI04031.1 MG872837_p118 hypothetical protein phrog_2279 unknown function unknown function 1 66530 66742
AVI03993.1 MG872837_p99 hypothetical protein phrog_2788 unknown function unknown function 1 58131 58466
AVI03900.1 MG872837_p5 terminase small subunit phrog_3858 unknown function unknown function 1 783 1064
AVI03982.1 MG872837_p88 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52402 52764
AVI04001.1 MG872837_p108 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62143 62433
AVI03963.1 MG872837_p69 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44344 45312
AVI04022.1 MG872837_p130 hypothetical protein phrog_7581 unknown function unknown function -1 69779 69991
AVI04025.1 MG872837_p133 hypothetical protein phrog_2904 unknown function unknown function 1 70421 70780
AVI03910.1 MG872837_p15 head-to-tail connector phrog_2796 head-tail connector protein connector 1 8954 9133
AVI03905.1 MG872837_p10 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2509 4179
AVI03977.1 MG872837_p83 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50284 51546
AVI03935.1 MG872837_p40 hypothetical protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33567 33953
AVI04028.1 MG872837_p135 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 71069 71416
AVI03902.1 MG872837_p7 hypothetical protein phrog_2142 unknown function unknown function 1 1511 1855
AVI03954.1 MG872837_p59 hypothetical protein phrog_2852 unknown function unknown function 1 40720 40857
AVI03947.1 MG872837_p52 hypothetical protein phrog_2815 unknown function unknown function -1 36482 36628
AVI04010.1 MG872837_p117 hypothetical protein phrog_2755 unknown function unknown function 1 66364 66537
AVI03934.1 MG872837_p39 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33125 33370
AVI03998.1 MG872837_p105 hypothetical protein phrog_2785 unknown function unknown function 1 61127 61483
AVI03989.1 MG872837_p95 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 56798 57058
AVI03919.1 MG872837_p24 tape measure protein phrog_2723 tail length tape measure protein tail 1 13327 18057
AVI03907.1 MG872837_p12 portal protein phrog_12 portal protein head and packaging 1 4399 5955
AVI03995.1 MG872837_p102 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 59596 60036
AVI03951.1 MG872837_p56 hypothetical protein phrog_2842 unknown function unknown function 1 38883 39122
AVI03915.1 MG872837_p20 major tail subunit phrog_476 major tail protein tail 1 10835 11809
AVI03926.1 MG872837_p31 hypothetical protein phrog_644 unknown function unknown function 1 28540 28968
AVI03933.1 MG872837_p38 hypothetical protein phrog_726 unknown function unknown function 1 32702 33118
AVI03958.1 MG872837_p64 hypothetical protein phrog_2744 unknown function unknown function 1 42666 42971
AVI03931.1 MG872837_p36 hypothetical protein phrog_2424 unknown function unknown function 1 31513 31851
AVI03920.1 MG872837_p25 minor tail protein phrog_106 minor tail protein tail 1 18087 19748
AVI04023.1 MG872837_p131 hypothetical protein phrog_2795 unknown function unknown function -1 69988 70188
AVI03911.1 MG872837_p16 head-to-tail connector phrog_442 head-tail adaptor connector 1 9133 9699
AVI04009.1 MG872837_p116 hypothetical protein phrog_2965 unknown function unknown function 1 66240 66377