| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG872838 |
Definition |
Mycobacterium phage JangDynasty, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus. |
DB of origin |
NUCCORE |
Length |
70883 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
124 |
%GC |
65.42 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVI04119.1 | MG872838_p88 | hypothetical protein | phrog_13372 | unknown function | unknown function | -1 | 54486 | 54761 |
| AVI04109.1 | MG872838_p78 | hypothetical protein | phrog_4776 | unknown function | unknown function | -1 | 48559 | 49284 |
| AVI04056.1 | MG872838_p25 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 11566 | 11802 |
| AVI04150.1 | MG872838_p119 | hypothetical protein | phrog_11310 | unknown function | unknown function | -1 | 67536 | 67931 |
| AVI04130.1 | MG872838_p99 | endonuclease inhibitor | phrog_11545 | unknown function | unknown function | -1 | 62075 | 62254 |
| AVI04087.1 | MG872838_p56 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 33561 | 35297 |
| AVI04118.1 | MG872838_p87 | hypothetical protein | phrog_12859 | unknown function | unknown function | -1 | 54251 | 54478 |
| AVI04096.1 | MG872838_p65 | hypothetical protein | phrog_12052 | unknown function | unknown function | 1 | 42114 | 42233 |
| AVI04081.1 | MG872838_p50 | hypothetical protein | phrog_11719 | unknown function | unknown function | -1 | 25128 | 25319 |
| AVI04050.1 | MG872838_p19 | DNA primase/polymerase | phrog_11515 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 7611 | 9974 |
| AVI04047.1 | MG872838_p16 | hypothetical protein | phrog_10983 | unknown function | unknown function | 1 | 6852 | 7163 |
| AVI04041.1 | MG872838_p10 | hypothetical protein | phrog_11799 | unknown function | unknown function | -1 | 3237 | 4067 |
| AVI04053.1 | MG872838_p22 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 10416 | 10790 |
| AVI04066.1 | MG872838_p35 | glycosyltransferase | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 17853 | 18545 |
| AVI04105.1 | MG872838_p74 | hypothetical protein | phrog_5798 | unknown function | unknown function | -1 | 46998 | 47231 |
| AVI04091.1 | MG872838_p60 | minor tail protein | phrog_644 | unknown function | unknown function | 1 | 40187 | 40588 |
| AVI04034.1 | MG872838_p3 | hypothetical protein | phrog_10119 | unknown function | unknown function | -1 | 684 | 824 |
| AVI04048.1 | MG872838_p17 | hypothetical protein | phrog_11308 | unknown function | unknown function | 1 | 7160 | 7387 |
| AVI04154.1 | MG872838_p123 | hypothetical protein | phrog_15054 | unknown function | unknown function | -1 | 68639 | 68869 |
| AVI04132.1 | MG872838_p101 | hypothetical protein | phrog_6351 | unknown function | unknown function | -1 | 62573 | 62980 |
| AVI04139.1 | MG872838_p108 | hypothetical protein | phrog_25334 | unknown function | unknown function | -1 | 64900 | 65109 |
| AVI04084.1 | MG872838_p52 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 25854 | 26793 |
| AVI04101.1 | MG872838_p70 | hypothetical protein | phrog_11815 | unknown function | unknown function | 1 | 45161 | 45637 |
| AVI04111.1 | MG872838_p80 | DNA polymerase III sliding clamp (beta) | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 50075 | 51253 |
| AVI04035.1 | MG872838_p4 | hypothetical protein | phrog_6910 | unknown function | unknown function | -1 | 824 | 1294 |
| AVI04049.1 | MG872838_p18 | hypothetical protein | phrog_11004 | unknown function | unknown function | 1 | 7384 | 7614 |
| AVI04064.1 | MG872838_p33 | O-methyltransferase | phrog_6608 | methyltransferase | other | 1 | 16410 | 16994 |
| AVI04075.1 | MG872838_p44 | hypothetical protein | phrog_11597 | unknown function | unknown function | 1 | 22787 | 23107 |
| AVI04058.1 | MG872838_p27 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12064 | 12417 |
| AVI04071.1 | MG872838_p40 | hypothetical protein | phrog_11246 | unknown function | unknown function | 1 | 21414 | 21662 |
| AVI04147.1 | MG872838_p116 | hypothetical protein | phrog_10868 | unknown function | unknown function | -1 | 67016 | 67117 |
| AVI04089.1 | MG872838_p58 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 36182 | 38692 |
| AVI04092.1 | MG872838_p61 | minor tail protein | phrog_8501 | minor tail protein | tail | 1 | 40592 | 40993 |
| AVI04086.1 | MG872838_p55 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 31846 | 33564 |
| AVI04099.1 | MG872838_p68 | holin | phrog_11087 | holin | lysis | 1 | 44558 | 44854 |
| AVI04100.1 | MG872838_p69 | hypothetical protein | phrog_3888 | unknown function | unknown function | 1 | 44851 | 45150 |
| AVI04068.1 | MG872838_p37 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 19231 | 19896 |
| AVI04080.1 | MG872838_p49 | hypothetical protein | phrog_2906 | unknown function | unknown function | -1 | 24955 | 25131 |
| AVI04108.1 | MG872838_p77 | hypothetical protein | phrog_10893 | unknown function | unknown function | -1 | 48131 | 48562 |
| AVI04069.1 | MG872838_p38 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 19893 | 20030 |
| AVI04144.1 | MG872838_p113 | hypothetical protein | phrog_20426 | unknown function | unknown function | -1 | 66406 | 66591 |
| AVI04044.1 | MG872838_p13 | hypothetical protein | phrog_11773 | unknown function | unknown function | 1 | 5586 | 5741 |
| AVI04145.1 | MG872838_p114 | hypothetical protein | phrog_8253 | unknown function | unknown function | -1 | 66595 | 66867 |
| AVI04062.1 | MG872838_p31 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14713 | 15183 |
| AVI04082.1 | MG872838_p51 | helix-turn-helix DNA binding domain protein | phrog_11503 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25316 | 25771 |
| AVI04113.1 | MG872838_p82 | hypothetical protein | phrog_16746 | unknown function | unknown function | -1 | 52205 | 52471 |
| AVI04106.1 | MG872838_p75 | hypothetical protein | phrog_549 | unknown function | unknown function | -1 | 47228 | 47605 |
| AVI04085.1 | MG872838_p54 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 26793 | 31808 |
| AVI04123.1 | MG872838_p92 | hypothetical protein | phrog_11784 | unknown function | unknown function | -1 | 57380 | 57721 |
| AVI04063.1 | MG872838_p32 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 15184 | 16413 |
| AVI04133.1 | MG872838_p102 | hypothetical protein | phrog_11675 | unknown function | unknown function | -1 | 62980 | 63384 |
| AVI04042.1 | MG872838_p11 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 4557 | 4844 |
| AVI04051.1 | MG872838_p20 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 9967 | 10179 |
| AVI04110.1 | MG872838_p79 | hypothetical protein | phrog_11268 | unknown function | unknown function | -1 | 49327 | 49959 |
| AVI04077.1 | MG872838_p46 | head-to-tail connector | phrog_813 | head-tail adaptor | connector | 1 | 23470 | 23922 |
| AVI04102.1 | MG872838_p71 | hypothetical protein | phrog_5552 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 45628 | 46125 |
| AVI04141.1 | MG872838_p110 | hypothetical protein | phrog_11047 | unknown function | unknown function | -1 | 65435 | 65689 |
| AVI04070.1 | MG872838_p39 | major capsid protein | phrog_2263 | major head protein | head and packaging | 1 | 20182 | 21414 |
| AVI04057.1 | MG872838_p26 | hypothetical protein | phrog_21173 | unknown function | unknown function | 1 | 11795 | 12067 |
| AVI04076.1 | MG872838_p45 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 23091 | 23477 |
| AVI04117.1 | MG872838_p86 | dsDNA break-binding protein | phrog_4873 | Ku-like DNA end binding | DNA, RNA and nucleotide metabolism | -1 | 53343 | 54197 |
| AVI04134.1 | MG872838_p103 | helix-turn-helix DNA binding domain protein | phrog_2590 | unknown function | unknown function | -1 | 63428 | 63739 |
| AVI04073.1 | MG872838_p42 | hypothetical protein | phrog_11160 | unknown function | unknown function | 1 | 22291 | 22428 |
| AVI04065.1 | MG872838_p34 | glycosyltransferase | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 16987 | 17856 |
| AVI04039.1 | MG872838_p8 | hypothetical protein | phrog_6074 | unknown function | unknown function | -1 | 2420 | 2758 |
| AVI04083.1 | MG872838_p53 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 25854 | 26396 |
| AVI04046.1 | MG872838_p15 | hypothetical protein | phrog_10414 | unknown function | unknown function | 1 | 6545 | 6859 |
| AVI04067.1 | MG872838_p36 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 18542 | 19162 |
| AVI04074.1 | MG872838_p43 | head-to-tail connector | phrog_1531 | head closure | connector | 1 | 22431 | 22790 |
| AVI04120.1 | MG872838_p89 | dsDNA partitioning protein | phrog_6218 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 54938 | 56446 |
| AVI04131.1 | MG872838_p100 | hypothetical protein | phrog_11120 | unknown function | unknown function | -1 | 62247 | 62576 |
| AVI04038.1 | MG872838_p7 | hypothetical protein | phrog_11562 | unknown function | unknown function | -1 | 2233 | 2427 |
| AVI04079.1 | MG872838_p48 | hypothetical protein | phrog_14205 | unknown function | unknown function | -1 | 24863 | 24958 |
| AVI04115.1 | MG872838_p84 | hypothetical protein | phrog_11365 | unknown function | unknown function | -1 | 52685 | 52963 |
| AVI04107.1 | MG872838_p76 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 47654 | 48085 |
| AVI04114.1 | MG872838_p83 | hypothetical protein | phrog_13187 | unknown function | unknown function | -1 | 52468 | 52644 |
| AVI04090.1 | MG872838_p59 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 38685 | 40175 |
| AVI04055.1 | MG872838_p24 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 11135 | 11569 |
| AVI04104.1 | MG872838_p73 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 46531 | 46938 |
| AVI04097.1 | MG872838_p66 | lysin A | phrog_700 | endolysin | lysis | 1 | 42283 | 43503 |
| AVI04059.1 | MG872838_p28 | hypothetical protein | phrog_11114 | unknown function | unknown function | 1 | 12414 | 12911 |
| AVI04153.1 | MG872838_p122 | hypothetical protein | phrog_17181 | unknown function | unknown function | -1 | 68366 | 68521 |
| AVI04138.1 | MG872838_p107 | hypothetical protein | phrog_11340 | unknown function | unknown function | -1 | 64580 | 64909 |
| AVI04052.1 | MG872838_p21 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 10134 | 10370 |
| AVI04045.1 | MG872838_p14 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 5823 | 6461 |
| AVI04088.1 | MG872838_p57 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 35337 | 36185 |
| AVI04127.1 | MG872838_p96 | hypothetical protein | phrog_6237 | unknown function | unknown function | -1 | 60797 | 61231 |
| AVI04129.1 | MG872838_p98 | hypothetical protein | phrog_11313 | unknown function | unknown function | -1 | 61788 | 62078 |
| AVI04135.1 | MG872838_p104 | hypothetical protein | phrog_3207 | unknown function | unknown function | -1 | 63732 | 64001 |
| AVI04112.1 | MG872838_p81 | band-7-like membrane protein | phrog_200 | lipoprotein | other | -1 | 51243 | 52208 |
| AVI04124.1 | MG872838_p93 | hypothetical protein | phrog_11085 | unknown function | unknown function | -1 | 57711 | 57983 |
| AVI04060.1 | MG872838_p29 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 12913 | 13212 |
| AVI04043.1 | MG872838_p12 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4837 | 5586 |
| AVI04037.1 | MG872838_p6 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 1646 | 2236 |
| AVI04061.1 | MG872838_p30 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 13169 | 14683 |
| AVI04032.1 | MG872838_p1 | hypothetical protein | phrog_10880 | unknown function | unknown function | -1 | 152 | 364 |
| AVI04151.1 | MG872838_p120 | hypothetical protein | phrog_11204 | unknown function | unknown function | -1 | 67945 | 68232 |
| AVI04040.1 | MG872838_p9 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 2755 | 3240 |
| AVI04054.1 | MG872838_p23 | WhiB family transcription factor | phrog_11069 | transcriptional regulator WhiB-like | transcription regulation | -1 | 10791 | 11090 |
| AVI04121.1 | MG872838_p90 | hypothetical protein | phrog_10921 | unknown function | unknown function | -1 | 56443 | 56781 |
| AVI04136.1 | MG872838_p105 | hypothetical protein | phrog_21921 | unknown function | unknown function | -1 | 64095 | 64280 |
| AVI04128.1 | MG872838_p97 | hypothetical protein | phrog_889 | unknown function | unknown function | -1 | 61307 | 61738 |
| AVI04072.1 | MG872838_p41 | head-to-tail connector | phrog_442 | head-tail adaptor | connector | 1 | 21672 | 22277 |
| AVI04095.1 | MG872838_p64 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 41428 | 42114 |
| AVI04093.1 | MG872838_p62 | hypothetical protein | phrog_8357 | unknown function | unknown function | 1 | 41003 | 41227 |
| AVI04033.1 | MG872838_p2 | hypothetical protein | phrog_11270 | unknown function | unknown function | -1 | 364 | 681 |
| AVI04149.1 | MG872838_p118 | hypothetical protein | phrog_11387 | unknown function | unknown function | -1 | 67311 | 67490 |
| AVI04142.1 | MG872838_p111 | hypothetical protein | phrog_11392 | unknown function | unknown function | -1 | 65686 | 65907 |
| AVI04137.1 | MG872838_p106 | hypothetical protein | phrog_13095 | unknown function | unknown function | -1 | 64389 | 64583 |
| AVI04140.1 | MG872838_p109 | hypothetical protein | phrog_18163 | unknown function | unknown function | -1 | 65106 | 65438 |
| AVI04078.1 | MG872838_p47 | major tail protein | phrog_476 | major tail protein | tail | 1 | 23951 | 24766 |
| AVI04122.1 | MG872838_p91 | hypothetical protein | phrog_11147 | unknown function | unknown function | -1 | 56825 | 57274 |
| AVI04103.1 | MG872838_p72 | hypothetical protein | phrog_11086 | unknown function | unknown function | 1 | 46122 | 46562 |
| AVI04094.1 | MG872838_p63 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 41240 | 41428 |
| AVI04155.1 | MG872838_p124 | hypothetical protein | phrog_11142 | unknown function | unknown function | 1 | 70049 | 70771 |
| AVI04126.1 | MG872838_p95 | AAA-ATPase | phrog_8638 | unknown function | unknown function | -1 | 58869 | 60569 |
| AVI04143.1 | MG872838_p112 | hypothetical protein | phrog_2164 | unknown function | unknown function | -1 | 65894 | 66409 |
| AVI04098.1 | MG872838_p67 | lysin B | phrog_102 | endolysin | lysis | 1 | 43505 | 44545 |
| AVI04125.1 | MG872838_p94 | hypothetical protein | phrog_11021 | unknown function | unknown function | -1 | 57980 | 58780 |
| AVI04116.1 | MG872838_p85 | hypothetical protein | phrog_2511 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 53016 | 53327 |
| AVI04148.1 | MG872838_p117 | hypothetical protein | phrog_11514 | unknown function | unknown function | -1 | 67114 | 67314 |
| AVI04146.1 | MG872838_p115 | hypothetical protein | phrog_11863 | unknown function | unknown function | -1 | 66864 | 67016 |
| AVI04036.1 | MG872838_p5 | DNA methylase | phrog_1008 | DNA methyltransferase | other | -1 | 1291 | 1854 |
| AVI04152.1 | MG872838_p121 | hypothetical protein | phrog_9101 | unknown function | unknown function | -1 | 68229 | 68369 |