Genomic map of Mycobacterium phage Priscilla (MG872841)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG872841
Definition
Mycobacterium phage Priscilla, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
58230
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.27
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVI04282.1 MG872841_p28 membrane protein phrog_1172 unknown function unknown function 1 26082 26216
AVI04279.1 MG872841_p25 HTH DNA binding protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25287 25484
AVI04312.1 MG872841_p58 hypothetical protein phrog_2096 unknown function unknown function 1 39540 40025
AVI04278.1 MG872841_p24 minor tail protein phrog_754 minor tail protein tail 1 24457 25281
AVI04257.1 MG872841_p3 portal protein phrog_104 portal protein head and packaging 1 2240 3610
AVI04334.1 MG872841_p80 hypothetical protein phrog_2939 unknown function unknown function 1 49300 49512
AVI04319.1 MG872841_p65 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42485 42847
AVI04260.1 MG872841_p6 major capsid protein phrog_267 major head protein head and packaging 1 5048 5869
AVI04322.1 MG872841_p68 membrane protein phrog_7443 unknown function unknown function 1 45134 45355
AVI04291.1 MG872841_p37 membrane protein phrog_1839 unknown function unknown function 1 30761 30853
AVI04302.1 MG872841_p48 hypothetical protein phrog_2025 unknown function unknown function 1 36429 36719
AVI04307.1 MG872841_p53 hypothetical protein phrog_1816 unknown function unknown function 1 37515 37703
AVI04349.1 MG872841_p95 membrane protein phrog_13974 membrane protein moron, auxiliary metabolic gene and host takeover 1 53737 54039
AVI04338.1 MG872841_p84 hypothetical protein phrog_647 unknown function unknown function 1 50289 50570
AVI04317.1 MG872841_p63 hypothetical protein phrog_5168 unknown function unknown function 1 41050 41514
AVI04315.1 MG872841_p61 hypothetical protein phrog_2078 unknown function unknown function 1 40665 40820
AVI04283.1 MG872841_p29 hypothetical protein phrog_747 unknown function unknown function 1 26283 26516
AVI04335.1 MG872841_p81 hypothetical protein phrog_1901 unknown function unknown function 1 49509 49700
AVI04271.1 MG872841_p17 minor tail protein phrog_732 minor tail protein tail 1 16580 17410
AVI04356.1 MG872841_p102 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55468 56904
AVI04264.1 MG872841_p10 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 7096 7500
AVI04281.1 MG872841_p27 hypothetical protein phrog_932 unknown function unknown function 1 25936 26085
AVI04293.1 MG872841_p39 DNA binding protein phrog_3693 unknown function unknown function -1 31265 31387
AVI04295.1 MG872841_p41 transposase phrog_506 transposase integration and excision -1 31517 32737
AVI04324.1 MG872841_p70 hypothetical protein phrog_2070 unknown function unknown function 1 45498 45650
AVI04314.1 MG872841_p60 helix-turn-helix DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40303 40668
AVI04289.1 MG872841_p35 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29642 30463
AVI04355.1 MG872841_p101 hypothetical protein phrog_2057 unknown function unknown function 1 55290 55451
AVI04343.1 MG872841_p89 hypothetical protein phrog_8093 unknown function unknown function 1 51600 51911
AVI04316.1 MG872841_p62 hypothetical protein phrog_1834 unknown function unknown function 1 40820 41053
AVI04354.1 MG872841_p100 hypothetical protein phrog_1385 unknown function unknown function 1 55055 55297
AVI04339.1 MG872841_p85 hypothetical protein phrog_722 unknown function unknown function 1 50563 51027
AVI04259.1 MG872841_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4448 5029
AVI04277.1 MG872841_p23 minor tail protein phrog_2012 minor tail protein tail 1 23822 24460
AVI04270.1 MG872841_p16 minor tail protein phrog_110 minor tail protein tail 1 14816 16525
AVI04305.1 MG872841_p51 hypothetical protein phrog_13720 unknown function unknown function 1 37043 37237
AVI04318.1 MG872841_p64 DNA recombinase phrog_1366 unknown function unknown function 1 41511 42488
AVI04350.1 MG872841_p96 hypothetical protein phrog_14508 unknown function unknown function 1 54036 54158
AVI04345.1 MG872841_p91 hypothetical protein phrog_6194 unknown function unknown function 1 52144 52221
AVI04333.1 MG872841_p79 hypothetical protein phrog_10032 unknown function unknown function 1 49139 49303
AVI04301.1 MG872841_p46 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 35396 36136
AVI04268.1 MG872841_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9492 13019
AVI04308.1 MG872841_p54 hypothetical protein phrog_1797 unknown function unknown function 1 37700 38347
AVI04267.1 MG872841_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8538 9474
AVI04280.1 MG872841_p26 hypothetical protein phrog_411 unknown function unknown function 1 25633 25929
AVI04262.1 MG872841_p8 head-to-tail connector complex protein phrog_763 head-tail adaptor connector 1 6444 6773
AVI04266.1 MG872841_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8538 9089
AVI04331.1 MG872841_p77 hypothetical protein phrog_9921 unknown function unknown function 1 48566 48658
AVI04336.1 MG872841_p82 hypothetical protein phrog_1573 DNA methyltransferase other 1 49697 50080
AVI04321.1 MG872841_p67 DNA methylase phrog_67 DNA methyltransferase other 1 44187 45137
AVI04299.1 MG872841_p45 membrane protein phrog_1948 unknown function unknown function -1 34686 35132
AVI04358.1 MG872841_p104 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57110 57733
AVI04300.1 MG872841_p47 CRO protein phrog_3 transcriptional repressor transcription regulation 1 36135 36368
AVI04342.1 MG872841_p88 hypothetical protein phrog_1545 unknown function unknown function 1 51460 51603
AVI04320.1 MG872841_p66 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 42844 44184
AVI04341.1 MG872841_p87 hypothetical protein phrog_1091 unknown function unknown function 1 51284 51463
AVI04359.1 MG872841_p105 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57733 58059
AVI04352.1 MG872841_p98 hypothetical protein phrog_1694 unknown function unknown function 1 54448 54648
AVI04304.1 MG872841_p50 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 36805 37002
AVI04297.1 MG872841_p42 hypothetical protein phrog_31335 unknown function unknown function -1 32748 32912
AVI04346.1 MG872841_p92 G-I-Y Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 52244 52783
AVI04337.1 MG872841_p83 hypothetical protein phrog_14505 unknown function unknown function 1 50077 50292
AVI04353.1 MG872841_p99 hypothetical protein phrog_1186 unknown function unknown function 1 54645 55058
AVI04298.1 MG872841_p44 integrase phrog_1 integrase integration and excision 1 33308 34609
AVI04311.1 MG872841_p57 WhiB family transcription factor phrog_1333 unknown function unknown function 1 39049 39543
AVI04258.1 MG872841_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3597 4352
AVI04326.1 MG872841_p72 helix-turn-helix DNA binding domain protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 46350 47312
AVI04287.1 MG872841_p33 membrane protein phrog_404 minor tail protein tail 1 29024 29398
AVI04328.1 MG872841_p74 hypothetical protein phrog_6275 unknown function unknown function 1 47570 47950
AVI04256.1 MG872841_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 572 2209
AVI04296.1 MG872841_p43 hypothetical protein phrog_25457 unknown function unknown function 1 32911 33063
AVI04255.1 MG872841_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
AVI04351.1 MG872841_p97 hypothetical protein phrog_419 unknown function unknown function 1 54167 54448
AVI04273.1 MG872841_p19 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 19956 21845
AVI04263.1 MG872841_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6780 7106
AVI04290.1 MG872841_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30547 30768
AVI04306.1 MG872841_p52 hypothetical protein phrog_12427 unknown function unknown function 1 37234 37518
AVI04357.1 MG872841_p103 hypothetical protein phrog_1693 unknown function unknown function 1 56907 57113
AVI04275.1 MG872841_p21 minor tail protein phrog_240 head protein head and packaging 1 23071 23412
AVI04325.1 MG872841_p71 G-I-Y Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 45748 46350
AVI04329.1 MG872841_p75 hypothetical protein phrog_1943 unknown function unknown function 1 47950 48144
AVI04286.1 MG872841_p32 holin phrog_443 holin lysis 1 28794 29027
AVI04309.1 MG872841_p55 hypothetical protein phrog_1849 unknown function unknown function 1 38427 38705
AVI04285.1 MG872841_p31 lysin B phrog_102 endolysin lysis 1 27784 28785
AVI04332.1 MG872841_p78 MPME 1 protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 48805 49137
AVI04276.1 MG872841_p22 minor tail protein phrog_2005 minor tail protein tail 1 23555 23809
AVI04288.1 MG872841_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29422 29655
AVI04303.1 MG872841_p49 hypothetical protein phrog_5563 unknown function unknown function 1 36716 36808
AVI04274.1 MG872841_p20 minor tail protein phrog_2106 minor tail protein tail 1 21845 23047
AVI04327.1 MG872841_p73 hypothetical protein phrog_2080 unknown function unknown function 1 47309 47500
AVI04330.1 MG872841_p76 hypothetical protein phrog_1573 DNA methyltransferase other 1 48141 48566
AVI04261.1 MG872841_p7 head-to-tail connector complex protein phrog_2377 head-tail adaptor Ad1 connector 1 5878 6447
AVI04292.1 MG872841_p38 membrane protein phrog_7480 unknown function unknown function -1 31062 31268
AVI04265.1 MG872841_p11 major tail protein phrog_476 major tail protein tail 1 7610 8419
AVI04347.1 MG872841_p93 hypothetical protein phrog_1467 unknown function unknown function 1 52780 53451
AVI04313.1 MG872841_p59 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 40022 40306
AVI04284.1 MG872841_p30 lysin A phrog_700 endolysin lysis 1 26513 27784
AVI04294.1 MG872841_p40 hypothetical protein phrog_2437 unknown function unknown function -1 31387 31509
AVI04340.1 MG872841_p86 hypothetical protein phrog_3472 unknown function unknown function 1 51024 51287
AVI04323.1 MG872841_p69 hypothetical protein phrog_2704 unknown function unknown function 1 45352 45501
AVI04348.1 MG872841_p94 hypothetical protein phrog_1869 unknown function unknown function 1 53594 53740
AVI04310.1 MG872841_p56 hypothetical protein phrog_658 unknown function unknown function 1 38702 39049
AVI04269.1 MG872841_p15 minor tail protein phrog_106 minor tail protein tail 1 13020 14729
AVI04344.1 MG872841_p90 hypothetical protein phrog_2278 unknown function unknown function 1 51908 52147
AVI04272.1 MG872841_p18 minor tail protein phrog_346 minor tail protein tail 1 17407 19959