| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG872841 |
Definition |
Mycobacterium phage Priscilla, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
58230 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
61.27 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVI04282.1 | MG872841_p28 | membrane protein | phrog_1172 | unknown function | unknown function | 1 | 26082 | 26216 |
| AVI04279.1 | MG872841_p25 | HTH DNA binding protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25287 | 25484 |
| AVI04312.1 | MG872841_p58 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39540 | 40025 |
| AVI04278.1 | MG872841_p24 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24457 | 25281 |
| AVI04257.1 | MG872841_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2240 | 3610 |
| AVI04334.1 | MG872841_p80 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 49300 | 49512 |
| AVI04319.1 | MG872841_p65 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42485 | 42847 |
| AVI04260.1 | MG872841_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5048 | 5869 |
| AVI04322.1 | MG872841_p68 | membrane protein | phrog_7443 | unknown function | unknown function | 1 | 45134 | 45355 |
| AVI04291.1 | MG872841_p37 | membrane protein | phrog_1839 | unknown function | unknown function | 1 | 30761 | 30853 |
| AVI04302.1 | MG872841_p48 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36429 | 36719 |
| AVI04307.1 | MG872841_p53 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37515 | 37703 |
| AVI04349.1 | MG872841_p95 | membrane protein | phrog_13974 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 53737 | 54039 |
| AVI04338.1 | MG872841_p84 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50289 | 50570 |
| AVI04317.1 | MG872841_p63 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 41050 | 41514 |
| AVI04315.1 | MG872841_p61 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40665 | 40820 |
| AVI04283.1 | MG872841_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26283 | 26516 |
| AVI04335.1 | MG872841_p81 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 49509 | 49700 |
| AVI04271.1 | MG872841_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16580 | 17410 |
| AVI04356.1 | MG872841_p102 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55468 | 56904 |
| AVI04264.1 | MG872841_p10 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 7096 | 7500 |
| AVI04281.1 | MG872841_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25936 | 26085 |
| AVI04293.1 | MG872841_p39 | DNA binding protein | phrog_3693 | unknown function | unknown function | -1 | 31265 | 31387 |
| AVI04295.1 | MG872841_p41 | transposase | phrog_506 | transposase | integration and excision | -1 | 31517 | 32737 |
| AVI04324.1 | MG872841_p70 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 45498 | 45650 |
| AVI04314.1 | MG872841_p60 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40303 | 40668 |
| AVI04289.1 | MG872841_p35 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29642 | 30463 |
| AVI04355.1 | MG872841_p101 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55290 | 55451 |
| AVI04343.1 | MG872841_p89 | hypothetical protein | phrog_8093 | unknown function | unknown function | 1 | 51600 | 51911 |
| AVI04316.1 | MG872841_p62 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 40820 | 41053 |
| AVI04354.1 | MG872841_p100 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 55055 | 55297 |
| AVI04339.1 | MG872841_p85 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 50563 | 51027 |
| AVI04259.1 | MG872841_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4448 | 5029 |
| AVI04277.1 | MG872841_p23 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 23822 | 24460 |
| AVI04270.1 | MG872841_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14816 | 16525 |
| AVI04305.1 | MG872841_p51 | hypothetical protein | phrog_13720 | unknown function | unknown function | 1 | 37043 | 37237 |
| AVI04318.1 | MG872841_p64 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 41511 | 42488 |
| AVI04350.1 | MG872841_p96 | hypothetical protein | phrog_14508 | unknown function | unknown function | 1 | 54036 | 54158 |
| AVI04345.1 | MG872841_p91 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 52144 | 52221 |
| AVI04333.1 | MG872841_p79 | hypothetical protein | phrog_10032 | unknown function | unknown function | 1 | 49139 | 49303 |
| AVI04301.1 | MG872841_p46 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 35396 | 36136 |
| AVI04268.1 | MG872841_p14 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9492 | 13019 |
| AVI04308.1 | MG872841_p54 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37700 | 38347 |
| AVI04267.1 | MG872841_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8538 | 9474 |
| AVI04280.1 | MG872841_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25633 | 25929 |
| AVI04262.1 | MG872841_p8 | head-to-tail connector complex protein | phrog_763 | head-tail adaptor | connector | 1 | 6444 | 6773 |
| AVI04266.1 | MG872841_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8538 | 9089 |
| AVI04331.1 | MG872841_p77 | hypothetical protein | phrog_9921 | unknown function | unknown function | 1 | 48566 | 48658 |
| AVI04336.1 | MG872841_p82 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 49697 | 50080 |
| AVI04321.1 | MG872841_p67 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 44187 | 45137 |
| AVI04299.1 | MG872841_p45 | membrane protein | phrog_1948 | unknown function | unknown function | -1 | 34686 | 35132 |
| AVI04358.1 | MG872841_p104 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57110 | 57733 |
| AVI04300.1 | MG872841_p47 | CRO protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 36135 | 36368 |
| AVI04342.1 | MG872841_p88 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 51460 | 51603 |
| AVI04320.1 | MG872841_p66 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 42844 | 44184 |
| AVI04341.1 | MG872841_p87 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51284 | 51463 |
| AVI04359.1 | MG872841_p105 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57733 | 58059 |
| AVI04352.1 | MG872841_p98 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54448 | 54648 |
| AVI04304.1 | MG872841_p50 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36805 | 37002 |
| AVI04297.1 | MG872841_p42 | hypothetical protein | phrog_31335 | unknown function | unknown function | -1 | 32748 | 32912 |
| AVI04346.1 | MG872841_p92 | G-I-Y Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52244 | 52783 |
| AVI04337.1 | MG872841_p83 | hypothetical protein | phrog_14505 | unknown function | unknown function | 1 | 50077 | 50292 |
| AVI04353.1 | MG872841_p99 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54645 | 55058 |
| AVI04298.1 | MG872841_p44 | integrase | phrog_1 | integrase | integration and excision | 1 | 33308 | 34609 |
| AVI04311.1 | MG872841_p57 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 39049 | 39543 |
| AVI04258.1 | MG872841_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3597 | 4352 |
| AVI04326.1 | MG872841_p72 | helix-turn-helix DNA binding domain protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 46350 | 47312 |
| AVI04287.1 | MG872841_p33 | membrane protein | phrog_404 | minor tail protein | tail | 1 | 29024 | 29398 |
| AVI04328.1 | MG872841_p74 | hypothetical protein | phrog_6275 | unknown function | unknown function | 1 | 47570 | 47950 |
| AVI04256.1 | MG872841_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 572 | 2209 |
| AVI04296.1 | MG872841_p43 | hypothetical protein | phrog_25457 | unknown function | unknown function | 1 | 32911 | 33063 |
| AVI04255.1 | MG872841_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| AVI04351.1 | MG872841_p97 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 54167 | 54448 |
| AVI04273.1 | MG872841_p19 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19956 | 21845 |
| AVI04263.1 | MG872841_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6780 | 7106 |
| AVI04290.1 | MG872841_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30547 | 30768 |
| AVI04306.1 | MG872841_p52 | hypothetical protein | phrog_12427 | unknown function | unknown function | 1 | 37234 | 37518 |
| AVI04357.1 | MG872841_p103 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 56907 | 57113 |
| AVI04275.1 | MG872841_p21 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 23071 | 23412 |
| AVI04325.1 | MG872841_p71 | G-I-Y Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45748 | 46350 |
| AVI04329.1 | MG872841_p75 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 47950 | 48144 |
| AVI04286.1 | MG872841_p32 | holin | phrog_443 | holin | lysis | 1 | 28794 | 29027 |
| AVI04309.1 | MG872841_p55 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38427 | 38705 |
| AVI04285.1 | MG872841_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27784 | 28785 |
| AVI04332.1 | MG872841_p78 | MPME 1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 48805 | 49137 |
| AVI04276.1 | MG872841_p22 | minor tail protein | phrog_2005 | minor tail protein | tail | 1 | 23555 | 23809 |
| AVI04288.1 | MG872841_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29422 | 29655 |
| AVI04303.1 | MG872841_p49 | hypothetical protein | phrog_5563 | unknown function | unknown function | 1 | 36716 | 36808 |
| AVI04274.1 | MG872841_p20 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21845 | 23047 |
| AVI04327.1 | MG872841_p73 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 47309 | 47500 |
| AVI04330.1 | MG872841_p76 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 48141 | 48566 |
| AVI04261.1 | MG872841_p7 | head-to-tail connector complex protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5878 | 6447 |
| AVI04292.1 | MG872841_p38 | membrane protein | phrog_7480 | unknown function | unknown function | -1 | 31062 | 31268 |
| AVI04265.1 | MG872841_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7610 | 8419 |
| AVI04347.1 | MG872841_p93 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52780 | 53451 |
| AVI04313.1 | MG872841_p59 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40022 | 40306 |
| AVI04284.1 | MG872841_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26513 | 27784 |
| AVI04294.1 | MG872841_p40 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31387 | 31509 |
| AVI04340.1 | MG872841_p86 | hypothetical protein | phrog_3472 | unknown function | unknown function | 1 | 51024 | 51287 |
| AVI04323.1 | MG872841_p69 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 45352 | 45501 |
| AVI04348.1 | MG872841_p94 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 53594 | 53740 |
| AVI04310.1 | MG872841_p56 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38702 | 39049 |
| AVI04269.1 | MG872841_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13020 | 14729 |
| AVI04344.1 | MG872841_p90 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 51908 | 52147 |
| AVI04272.1 | MG872841_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17407 | 19959 |