| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG873442 |
Definition |
Salmonella phage SE131, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
89910 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
147 |
%GC |
44.21 |
Number of singletons |
17 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ48171.1 | MG873442_p40 | hypothetical protein | phrog_34455 | unknown function | unknown function | 1 | 20139 | 20369 |
| AVJ48196.1 | MG873442_p65 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | 1 | 34749 | 35411 |
| AVJ48219.1 | MG873442_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46918 | 47100 |
| AVJ48255.1 | MG873442_p124 | hypothetical protein | phrog_35703 | unknown function | unknown function | -1 | 61431 | 61562 |
| AVJ48191.1 | MG873442_p60 | hypothetical protein | phrog_13365 | unknown function | unknown function | 1 | 33370 | 33579 |
| AVJ48151.1 | MG873442_p20 | hypothetical protein | phrog_28648 | unknown function | unknown function | 1 | 9310 | 9540 |
| AVJ48226.1 | MG873442_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49613 | 49780 |
| AVJ48225.1 | MG873442_p94 | NAD-dependent protein deacetylase of SIR2 family | phrog_2162 | Sir2 (NAD-dependent deacetylase) | DNA, RNA and nucleotide metabolism | 1 | 48868 | 49620 |
| AVJ48234.1 | MG873442_p103 | L-alanyl-D-glutamate peptidase | phrog_1768 | endolysin | lysis | 1 | 51622 | 51921 |
| AVJ48254.1 | MG873442_p123 | hypothetical protein | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 60954 | 61382 |
| AVJ48271.1 | MG873442_p140 | capsid and scaffold protein | phrog_1328 | major head protein | head and packaging | -1 | 79634 | 81394 |
| AVJ48262.1 | MG873442_p131 | hypothetical protein | phrog_3287 | virion structural protein | head and packaging | -1 | 71242 | 72957 |
| AVJ48268.1 | MG873442_p137 | hypothetical protein | phrog_2941 | virion structural protein | head and packaging | -1 | 78346 | 79035 |
| AVJ48232.1 | MG873442_p101 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50978 | 51067 |
| AVJ48159.1 | MG873442_p28 | hypothetical protein | phrog_28397 | unknown function | unknown function | 1 | 11646 | 11834 |
| AVJ48146.1 | MG873442_p15 | hypothetical protein | phrog_2529 | unknown function | unknown function | 1 | 7117 | 7479 |
| AVJ48229.1 | MG873442_p98 | hypothetical protein | phrog_11811 | unknown function | unknown function | 1 | 50207 | 50419 |
| AVJ48247.1 | MG873442_p116 | hypothetical protein | phrog_38302 | unknown function | unknown function | 1 | 58220 | 58540 |
| AVJ48260.1 | MG873442_p129 | hypothetical protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | -1 | 69768 | 71006 |
| AVJ48162.1 | MG873442_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14138 | 14260 |
| AVJ48227.1 | MG873442_p96 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49773 | 49994 |
| AVJ48276.1 | MG873442_p145 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 86190 | 87674 |
| AVJ48170.1 | MG873442_p39 | hypothetical protein | phrog_944 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19690 | 20142 |
| AVJ48168.1 | MG873442_p37 | hypothetical protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | 1 | 18956 | 19270 |
| AVJ48201.1 | MG873442_p70 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 38487 | 39074 |
| AVJ48249.1 | MG873442_p118 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 58842 | 59111 |
| AVJ48140.1 | MG873442_p9 | hypothetical protein | phrog_34279 | unknown function | unknown function | 1 | 5037 | 5279 |
| AVJ48216.1 | MG873442_p85 | hypothetical protein | phrog_23896 | unknown function | unknown function | 1 | 44504 | 44773 |
| AVJ48198.1 | MG873442_p67 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 35983 | 37785 |
| AVJ48176.1 | MG873442_p45 | hypothetical protein | phrog_24882 | unknown function | unknown function | 1 | 22052 | 22963 |
| AVJ48138.1 | MG873442_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4550 | 4933 |
| AVJ48187.1 | MG873442_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31466 | 31651 |
| AVJ48157.1 | MG873442_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11335 | 11427 |
| AVJ48269.1 | MG873442_p138 | hypothetical protein | phrog_402 | unknown function | unknown function | -1 | 79083 | 79274 |
| AVJ48195.1 | MG873442_p64 | hypothetical protein | phrog_35303 | unknown function | unknown function | 1 | 34574 | 34762 |
| AVJ48165.1 | MG873442_p34 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 16038 | 16922 |
| AVJ48204.1 | MG873442_p73 | hypothetical protein | phrog_10984 | unknown function | unknown function | 1 | 40116 | 40382 |
| AVJ48164.1 | MG873442_p33 | hypothetical protein | phrog_1491 | tail fiber protein | tail | 1 | 15057 | 15698 |
| AVJ48217.1 | MG873442_p86 | hypothetical protein | phrog_1247 | MazG-like pyrophosphatase | other | 1 | 44773 | 45057 |
| AVJ48220.1 | MG873442_p89 | hypothetical protein | phrog_35057 | unknown function | unknown function | 1 | 47097 | 47414 |
| AVJ48246.1 | MG873442_p115 | chromosome segregation protein | phrog_289 | GTP-binding domain | other | 1 | 57886 | 58230 |
| AVJ48275.1 | MG873442_p144 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 83819 | 86170 |
| AVJ48147.1 | MG873442_p16 | hypothetical protein | phrog_36449 | unknown function | unknown function | 1 | 7485 | 7766 |
| AVJ48251.1 | MG873442_p120 | hypothetical protein | phrog_887 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 59301 | 60056 |
| AVJ48206.1 | MG873442_p75 | hypothetical protein | phrog_34669 | unknown function | unknown function | 1 | 40651 | 40791 |
| AVJ48186.1 | MG873442_p55 | hypothetical protein | phrog_3715 | unknown function | unknown function | 1 | 31237 | 31464 |
| AVJ48184.1 | MG873442_p53 | D-alanine--D-alanine ligase | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 29734 | 30990 |
| AVJ48258.1 | MG873442_p127 | hypothetical protein | phrog_25101 | unknown function | unknown function | -1 | 68285 | 68830 |
| AVJ48278.1 | MG873442_p147 | hypothetical protein | phrog_8771 | unknown function | unknown function | -1 | 88921 | 89316 |
| AVJ48273.1 | MG873442_p142 | hypothetical protein | phrog_9013 | head scaffolding protein | head and packaging | -1 | 82537 | 83589 |
| AVJ48252.1 | MG873442_p121 | hypothetical protein | phrog_35118 | unknown function | unknown function | 1 | 60037 | 60327 |
| AVJ48257.1 | MG873442_p126 | hypothetical protein | phrog_35431 | unknown function | unknown function | -1 | 66645 | 68285 |
| AVJ48143.1 | MG873442_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6281 | 6448 |
| AVJ48239.1 | MG873442_p108 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 54071 | 54982 |
| AVJ48152.1 | MG873442_p21 | hypothetical protein | phrog_6110 | unknown function | unknown function | 1 | 9637 | 9789 |
| AVJ48167.1 | MG873442_p36 | hypothetical protein | phrog_27965 | unknown function | unknown function | 1 | 18598 | 18819 |
| AVJ48224.1 | MG873442_p93 | hypothetical protein | phrog_757 | DNA methyltransferase | other | 1 | 48171 | 48875 |
| AVJ48221.1 | MG873442_p90 | hypothetical protein | phrog_32833 | unknown function | unknown function | 1 | 47606 | 47809 |
| AVJ48210.1 | MG873442_p79 | hypothetical protein | phrog_36488 | unknown function | unknown function | 1 | 42142 | 42441 |
| AVJ48203.1 | MG873442_p72 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 39830 | 40126 |
| AVJ48183.1 | MG873442_p52 | hypothetical protein | phrog_36016 | unknown function | unknown function | 1 | 29405 | 29656 |
| AVJ48180.1 | MG873442_p49 | hypothetical protein | phrog_38711 | unknown function | unknown function | 1 | 25445 | 27148 |
| AVJ48137.1 | MG873442_p6 | hypothetical protein | phrog_30165 | unknown function | unknown function | 1 | 4359 | 4547 |
| AVJ48233.1 | MG873442_p102 | serine/threonine protein phosphatase | phrog_547 | phosphoesterase | other | 1 | 51060 | 51605 |
| AVJ48174.1 | MG873442_p43 | hypothetical protein | phrog_26686 | unknown function | unknown function | 1 | 21308 | 21505 |
| AVJ48144.1 | MG873442_p13 | hypothetical protein | phrog_6504 | unknown function | unknown function | 1 | 6450 | 6632 |
| AVJ48156.1 | MG873442_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11184 | 11342 |
| AVJ48244.1 | MG873442_p113 | hypothetical protein | phrog_3986 | unknown function | unknown function | 1 | 57129 | 57569 |
| AVJ48148.1 | MG873442_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7768 | 8085 |
| AVJ48190.1 | MG873442_p59 | hypothetical protein | phrog_23983 | unknown function | unknown function | 1 | 32430 | 33008 |
| AVJ48250.1 | MG873442_p119 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59104 | 59304 |
| AVJ48270.1 | MG873442_p139 | hypothetical protein | phrog_20917 | unknown function | unknown function | -1 | 79288 | 79572 |
| AVJ48175.1 | MG873442_p44 | hypothetical protein | phrog_951 | unknown function | unknown function | 1 | 21580 | 21975 |
| AVJ48264.1 | MG873442_p133 | hypothetical protein | phrog_13258 | virion structural protein | head and packaging | -1 | 73858 | 74109 |
| AVJ48231.1 | MG873442_p100 | hypothetical protein | phrog_3955 | unknown function | unknown function | 1 | 50835 | 50981 |
| AVJ48274.1 | MG873442_p143 | hypothetical protein | phrog_23234 | unknown function | unknown function | -1 | 83589 | 83816 |
| AVJ48155.1 | MG873442_p24 | hypothetical protein | phrog_4592 | decoy of host sigma70 | moron, auxiliary metabolic gene and host takeover | 1 | 10579 | 11097 |
| AVJ48242.1 | MG873442_p111 | hypothetical protein | phrog_38244 | unknown function | unknown function | 1 | 56553 | 56882 |
| AVJ48139.1 | MG873442_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4920 | 5033 |
| AVJ48266.1 | MG873442_p135 | tail protein I | phrog_2871 | tail protein | tail | -1 | 74619 | 77567 |
| AVJ48238.1 | MG873442_p107 | hypothetical protein | phrog_26830 | unknown function | unknown function | 1 | 53889 | 54074 |
| AVJ48230.1 | MG873442_p99 | hypothetical protein | phrog_4256 | unknown function | unknown function | 1 | 50419 | 50835 |
| AVJ48158.1 | MG873442_p27 | hypothetical protein | phrog_32310 | unknown function | unknown function | 1 | 11424 | 11642 |
| AVJ48199.1 | MG873442_p68 | hypothetical protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 37795 | 38301 |
| AVJ48240.1 | MG873442_p109 | hypothetical protein | phrog_36539 | unknown function | unknown function | 1 | 54966 | 55382 |
| AVJ48228.1 | MG873442_p97 | hypothetical protein | phrog_38254 | unknown function | unknown function | 1 | 49997 | 50197 |
| AVJ48178.1 | MG873442_p47 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | 1 | 24053 | 24856 |
| AVJ48272.1 | MG873442_p141 | capsid and scaffold protein | phrog_1328 | major head protein | head and packaging | -1 | 81472 | 82410 |
| AVJ48166.1 | MG873442_p35 | nicotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 16931 | 18601 |
| AVJ48212.1 | MG873442_p81 | hypothetical protein | phrog_29481 | unknown function | unknown function | 1 | 43004 | 43174 |
| AVJ48277.1 | MG873442_p146 | hypothetical protein | phrog_2241 | unknown function | unknown function | -1 | 88644 | 88877 |
| AVJ48134.1 | MG873442_p3 | hypothetical protein | phrog_29052 | unknown function | unknown function | 1 | 3215 | 3583 |
| AVJ48182.1 | MG873442_p51 | hypothetical protein | phrog_9477 | unknown function | unknown function | 1 | 29175 | 29405 |
| AVJ48259.1 | MG873442_p128 | hypothetical protein | phrog_27929 | unknown function | unknown function | -1 | 68841 | 69737 |
| AVJ48173.1 | MG873442_p42 | hypothetical protein | phrog_34634 | unknown function | unknown function | 1 | 21038 | 21295 |
| AVJ48223.1 | MG873442_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48047 | 48196 |
| AVJ48142.1 | MG873442_p11 | hypothetical protein | phrog_31994 | unknown function | unknown function | 1 | 5543 | 5941 |
| AVJ48169.1 | MG873442_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19464 | 19697 |
| AVJ48135.1 | MG873442_p4 | hypothetical protein | phrog_33783 | unknown function | unknown function | 1 | 3576 | 3785 |
| AVJ48189.1 | MG873442_p58 | hypothetical protein | phrog_24263 | unknown function | unknown function | 1 | 31860 | 32372 |
| AVJ48154.1 | MG873442_p23 | hypothetical protein | phrog_22555 | unknown function | unknown function | 1 | 10296 | 10604 |
| AVJ48153.1 | MG873442_p22 | hypothetical protein | phrog_29867 | unknown function | unknown function | 1 | 9810 | 10052 |
| AVJ48241.1 | MG873442_p110 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 55430 | 56518 |
| AVJ48185.1 | MG873442_p54 | hypothetical protein | phrog_24116 | unknown function | unknown function | 1 | 30980 | 31237 |
| AVJ48193.1 | MG873442_p62 | hypothetical protein | phrog_6894 | unknown function | unknown function | 1 | 33784 | 34104 |
| AVJ48181.1 | MG873442_p50 | hypothetical protein | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | 1 | 27216 | 29165 |
| AVJ48194.1 | MG873442_p63 | hypothetical protein | phrog_30604 | unknown function | unknown function | 1 | 34189 | 34587 |
| AVJ48136.1 | MG873442_p5 | hypothetical protein | phrog_23050 | unknown function | unknown function | 1 | 3787 | 4356 |
| AVJ48132.1 | MG873442_p1 | hypothetical protein | phrog_34693 | unknown function | unknown function | 1 | 2245 | 2958 |
| AVJ48261.1 | MG873442_p130 | hypothetical protein | phrog_28154 | unknown function | unknown function | -1 | 71018 | 71242 |
| AVJ48208.1 | MG873442_p77 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 41028 | 41693 |
| AVJ48179.1 | MG873442_p48 | hypothetical protein | phrog_4877 | unknown function | unknown function | 1 | 24867 | 25472 |
| AVJ48133.1 | MG873442_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3028 | 3153 |
| AVJ48265.1 | MG873442_p134 | hypothetical protein | phrog_27560 | unknown function | unknown function | -1 | 74175 | 74615 |
| AVJ48213.1 | MG873442_p82 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 43179 | 43346 |
| AVJ48150.1 | MG873442_p19 | hypothetical protein | phrog_37494 | unknown function | unknown function | 1 | 9098 | 9292 |
| AVJ48197.1 | MG873442_p66 | hypothetical protein | phrog_27921 | unknown function | unknown function | 1 | 35432 | 35935 |
| AVJ48236.1 | MG873442_p105 | hypothetical protein | phrog_6599 | unknown function | unknown function | 1 | 52459 | 53232 |
| AVJ48245.1 | MG873442_p114 | hypothetical protein | phrog_31847 | unknown function | unknown function | 1 | 57719 | 57889 |
| AVJ48263.1 | MG873442_p132 | hypothetical protein | phrog_6465 | tail protein | tail | -1 | 72971 | 73861 |
| AVJ48141.1 | MG873442_p10 | zinc-finger containing protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 5279 | 5539 |
| AVJ48160.1 | MG873442_p29 | hypothetical protein | phrog_2376 | ATPase | other | 1 | 11904 | 13112 |
| AVJ48218.1 | MG873442_p87 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 45074 | 46909 |
| AVJ48207.1 | MG873442_p76 | hypothetical protein | phrog_13236 | unknown function | unknown function | 1 | 40788 | 41009 |
| AVJ48215.1 | MG873442_p84 | hypothetical protein | phrog_8562 | unknown function | unknown function | 1 | 43752 | 44237 |
| AVJ48161.1 | MG873442_p30 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 13198 | 14118 |
| AVJ48163.1 | MG873442_p32 | hypothetical protein | phrog_35316 | unknown function | unknown function | 1 | 14352 | 15056 |
| AVJ48209.1 | MG873442_p78 | DNA protection during starvation protein | phrog_3636 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 41693 | 42133 |
| AVJ48200.1 | MG873442_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38363 | 38476 |
| AVJ48237.1 | MG873442_p106 | RNA polymerase ECF-type sigma factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | 1 | 53322 | 53879 |
| AVJ48235.1 | MG873442_p104 | hypothetical protein | phrog_23123 | unknown function | unknown function | 1 | 51933 | 52355 |
| AVJ48188.1 | MG873442_p57 | hypothetical protein | phrog_38607 | unknown function | unknown function | 1 | 31654 | 31860 |
| AVJ48253.1 | MG873442_p122 | hypothetical protein | phrog_8821 | Rz-like spanin | lysis | -1 | 60538 | 60957 |
| AVJ48192.1 | MG873442_p61 | hypothetical protein | phrog_33966 | unknown function | unknown function | 1 | 33580 | 33783 |
| AVJ48256.1 | MG873442_p125 | hypothetical protein | phrog_32895 | unknown function | unknown function | -1 | 61636 | 66633 |
| AVJ48214.1 | MG873442_p83 | hypothetical protein | phrog_4590 | unknown function | unknown function | 1 | 43361 | 43702 |
| AVJ48145.1 | MG873442_p14 | hypothetical protein | phrog_16376 | unknown function | unknown function | 1 | 6625 | 6792 |
| AVJ48202.1 | MG873442_p71 | phosphate starvation-inducible protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | 1 | 39087 | 39830 |
| AVJ48211.1 | MG873442_p80 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 42504 | 43004 |
| AVJ48267.1 | MG873442_p136 | hypothetical protein | phrog_24774 | unknown function | unknown function | -1 | 77560 | 78336 |
| AVJ48149.1 | MG873442_p18 | hypothetical protein | phrog_35232 | unknown function | unknown function | 1 | 8205 | 8384 |
| AVJ48222.1 | MG873442_p91 | hypothetical protein | phrog_33689 | unknown function | unknown function | 1 | 47806 | 48024 |
| AVJ48243.1 | MG873442_p112 | hypothetical protein | phrog_29294 | unknown function | unknown function | 1 | 56875 | 57114 |
| AVJ48172.1 | MG873442_p41 | hypothetical protein | phrog_938 | endolysin | lysis | 1 | 20608 | 21033 |
| AVJ48248.1 | MG873442_p117 | hypothetical protein | phrog_32535 | unknown function | unknown function | 1 | 58678 | 58845 |
| AVJ48177.1 | MG873442_p46 | hypothetical protein | phrog_19161 | unknown function | unknown function | 1 | 22965 | 24038 |
| AVJ48205.1 | MG873442_p74 | hypothetical protein | phrog_25175 | unknown function | unknown function | 1 | 40384 | 40617 |