| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG920060 |
Definition |
Mycobacterium phage Bob3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52233 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
63.83 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ49116.1 | MG920060_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4198 | 5583 |
| AVJ49137.1 | MG920060_p30 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23625 | 25478 |
| AVJ49200.1 | MG920060_p94 | hypothetical protein | phrog_18559 | unknown function | unknown function | -1 | 51493 | 51642 |
| AVJ49164.1 | MG920060_p58 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 38499 | 39785 |
| AVJ49194.1 | MG920060_p88 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 50114 | 50233 |
| AVJ49130.1 | MG920060_p23 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 15911 | 18391 |
| AVJ49174.1 | MG920060_p68 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 42471 | 42791 |
| AVJ49134.1 | MG920060_p27 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22513 | 22959 |
| AVJ49109.1 | MG920060_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 599 | 751 |
| AVJ49133.1 | MG920060_p26 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20673 | 22475 |
| AVJ49123.1 | MG920060_p15 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12227 | 12463 |
| AVJ49156.1 | MG920060_p49 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 35693 | 36460 |
| AVJ49179.1 | MG920060_p73 | hypothetical protein | phrog_4604 | unknown function | unknown function | -1 | 45198 | 45659 |
| AVJ49118.1 | MG920060_p10 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 6561 | 8249 |
| AVJ49111.1 | MG920060_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1079 | 1519 |
| AVJ49183.1 | MG920060_p77 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47392 | 47691 |
| AVJ49119.1 | MG920060_p11 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8246 | 9688 |
| AVJ49128.1 | MG920060_p20 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 14128 | 14979 |
| AVJ49159.1 | MG920060_p52 | hypothetical protein | phrog_8843 | unknown function | unknown function | -1 | 37028 | 37249 |
| AVJ49115.1 | MG920060_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 3893 | 4150 |
| AVJ49129.1 | MG920060_p21 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15100 | 15899 |
| AVJ49114.1 | MG920060_p6 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3625 | 3885 |
| AVJ49144.1 | MG920060_p37 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 30556 | 30786 |
| AVJ49146.1 | MG920060_p39 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 30950 | 31045 |
| AVJ49176.1 | MG920060_p70 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43004 | 43804 |
| AVJ49117.1 | MG920060_p9 | lysin B | phrog_102 | endolysin | lysis | 1 | 5573 | 6541 |
| AVJ49190.1 | MG920060_p84 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 48817 | 48966 |
| AVJ49142.1 | MG920060_p35 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 28484 | 28780 |
| AVJ49154.1 | MG920060_p47 | helix-turn-helix DNA binding protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 34740 | 35555 |
| AVJ49136.1 | MG920060_p29 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 23306 | 23599 |
| AVJ49191.1 | MG920060_p85 | hypothetical protein | phrog_4631 | unknown function | unknown function | -1 | 48963 | 49280 |
| AVJ49139.1 | MG920060_p32 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27042 | 27362 |
| AVJ49141.1 | MG920060_p34 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 27560 | 28363 |
| AVJ49171.1 | MG920060_p65 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 41895 | 42068 |
| AVJ49153.1 | MG920060_p46 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34561 | 34743 |
| AVJ49165.1 | MG920060_p59 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39782 | 40291 |
| AVJ49122.1 | MG920060_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11147 | 12148 |
| AVJ49189.1 | MG920060_p83 | hypothetical protein | phrog_9318 | unknown function | unknown function | -1 | 48628 | 48798 |
| AVJ49140.1 | MG920060_p33 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27372 | 27563 |
| AVJ49178.1 | MG920060_p72 | helix-turn-helix DNA binding domain protein | phrog_4285 | transposase | integration and excision | -1 | 44155 | 44862 |
| AVJ49151.1 | MG920060_p44 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 33812 | 34042 |
| AVJ49180.1 | MG920060_p74 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 45867 | 46184 |
| AVJ49126.1 | MG920060_p18 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13274 | 13669 |
| AVJ49160.1 | MG920060_p53 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37246 | 37824 |
| AVJ49127.1 | MG920060_p19 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 13673 | 14119 |
| AVJ49152.1 | MG920060_p45 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34073 | 34564 |
| AVJ49125.1 | MG920060_p17 | head-to-tail connector complex protein | phrog_320 | head closure Hc1 | connector | 1 | 12912 | 13274 |
| AVJ49121.1 | MG920060_p13 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10625 | 11137 |
| AVJ49197.1 | MG920060_p91 | hypothetical protein | phrog_11620 | unknown function | unknown function | 1 | 50790 | 50954 |
| AVJ49188.1 | MG920060_p82 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 48506 | 48631 |
| AVJ49195.1 | MG920060_p89 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 50349 | 50504 |
| AVJ49145.1 | MG920060_p38 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 30783 | 30953 |
| AVJ49124.1 | MG920060_p16 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12463 | 12912 |
| AVJ49110.1 | MG920060_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 748 | 1044 |
| AVJ49148.1 | MG920060_p41 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 31326 | 31682 |
| AVJ49162.1 | MG920060_p56 | hypothetical protein | phrog_5801 | unknown function | unknown function | -1 | 38271 | 38342 |
| AVJ49150.1 | MG920060_p43 | hypothetical protein | phrog_6173 | unknown function | unknown function | -1 | 33561 | 33815 |
| AVJ49196.1 | MG920060_p90 | hypothetical protein | phrog_828 | unknown function | unknown function | 1 | 50587 | 50793 |
| AVJ49186.1 | MG920060_p80 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 48154 | 48342 |
| AVJ49163.1 | MG920060_p57 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 38339 | 38473 |
| AVJ49182.1 | MG920060_p76 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 46618 | 47130 |
| AVJ49173.1 | MG920060_p67 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42181 | 42474 |
| AVJ49170.1 | MG920060_p64 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41074 | 41895 |
| AVJ49132.1 | MG920060_p25 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 20491 | 20673 |
| AVJ49167.1 | MG920060_p61 | hypothetical protein | phrog_2591 | unknown function | unknown function | -1 | 40402 | 40650 |
| AVJ49120.1 | MG920060_p12 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9685 | 10566 |
| AVJ49175.1 | MG920060_p69 | helix-turn-helix DNA binding protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42795 | 42977 |
| AVJ49113.1 | MG920060_p5 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 2926 | 3615 |
| AVJ49147.1 | MG920060_p40 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31042 | 31329 |
| AVJ49181.1 | MG920060_p75 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 46181 | 46576 |
| AVJ49157.1 | MG920060_p50 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 36457 | 36636 |
| AVJ49155.1 | MG920060_p48 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35548 | 35688 |
| AVJ49158.1 | MG920060_p51 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 36633 | 37043 |
| AVJ49131.1 | MG920060_p24 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18415 | 20472 |
| AVJ49185.1 | MG920060_p79 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 47954 | 48157 |
| AVJ49149.1 | MG920060_p42 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 31710 | 33539 |
| AVJ49168.1 | MG920060_p62 | hypothetical protein | phrog_9840 | unknown function | unknown function | -1 | 40650 | 40781 |
| AVJ49187.1 | MG920060_p81 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48342 | 48509 |
| AVJ49199.1 | MG920060_p93 | hypothetical protein | phrog_3574 | unknown function | unknown function | 1 | 51264 | 51452 |
| AVJ49135.1 | MG920060_p28 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 22971 | 23303 |
| AVJ49177.1 | MG920060_p71 | hypothetical protein | phrog_8167 | unknown function | unknown function | -1 | 43804 | 44139 |
| AVJ49193.1 | MG920060_p87 | hypothetical protein | phrog_5533 | unknown function | unknown function | -1 | 49899 | 50084 |
| AVJ49161.1 | MG920060_p55 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 38107 | 38271 |
| AVJ49172.1 | MG920060_p66 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 42065 | 42184 |
| AVJ49201.1 | MG920060_p22 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15100 | 15477 |
| AVJ49192.1 | MG920060_p86 | hypothetical protein | phrog_5017 | unknown function | unknown function | -1 | 49552 | 49899 |
| AVJ49166.1 | MG920060_p60 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 40278 | 40364 |
| AVJ49138.1 | MG920060_p31 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25471 | 26949 |
| AVJ49143.1 | MG920060_p36 | integrase | phrog_95 | integrase | integration and excision | 1 | 28857 | 30434 |
| AVJ49112.1 | MG920060_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 1846 | 2916 |
| AVJ49169.1 | MG920060_p63 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40778 | 41074 |
| AVJ49202.1 | MG920060_p54 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37613 | 38128 |
| AVJ49184.1 | MG920060_p78 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 47688 | 47855 |
| AVJ49198.1 | MG920060_p92 | hypothetical protein | phrog_13961 | unknown function | unknown function | -1 | 50998 | 51183 |