Genomic map of Mycobacterium phage Bob3 (MG920060)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG920060
Definition
Mycobacterium phage Bob3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52233
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.83
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ49116.1 MG920060_p8 lysin A phrog_317 endolysin lysis 1 4198 5583
AVJ49137.1 MG920060_p30 minor tail protein phrog_346 minor tail protein tail 1 23625 25478
AVJ49200.1 MG920060_p94 hypothetical protein phrog_18559 unknown function unknown function -1 51493 51642
AVJ49164.1 MG920060_p58 DNA methylase phrog_67 DNA methyltransferase other -1 38499 39785
AVJ49194.1 MG920060_p88 hypothetical protein phrog_2212 unknown function unknown function -1 50114 50233
AVJ49130.1 MG920060_p23 tapemeasure protein phrog_305 tail length tape measure protein tail 1 15911 18391
AVJ49174.1 MG920060_p68 hypothetical protein phrog_2184 unknown function unknown function -1 42471 42791
AVJ49134.1 MG920060_p27 minor tail protein phrog_352 minor tail protein tail 1 22513 22959
AVJ49109.1 MG920060_p1 hypothetical protein phrog_4649 unknown function unknown function 1 599 751
AVJ49133.1 MG920060_p26 minor tail protein phrog_110 minor tail protein tail 1 20673 22475
AVJ49123.1 MG920060_p15 hypothetical protein phrog_1857 head-tail connector protein connector 1 12227 12463
AVJ49156.1 MG920060_p49 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 35693 36460
AVJ49179.1 MG920060_p73 hypothetical protein phrog_4604 unknown function unknown function -1 45198 45659
AVJ49118.1 MG920060_p10 terminase phrog_9 terminase large subunit head and packaging 1 6561 8249
AVJ49111.1 MG920060_p3 hypothetical protein phrog_226 minor tail protein tail 1 1079 1519
AVJ49183.1 MG920060_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47392 47691
AVJ49119.1 MG920060_p11 portal protein phrog_104 portal protein head and packaging 1 8246 9688
AVJ49128.1 MG920060_p20 major tail subunit phrog_117 major tail protein tail 1 14128 14979
AVJ49159.1 MG920060_p52 hypothetical protein phrog_8843 unknown function unknown function -1 37028 37249
AVJ49115.1 MG920060_p7 hypothetical protein phrog_747 unknown function unknown function 1 3893 4150
AVJ49129.1 MG920060_p21 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15100 15899
AVJ49114.1 MG920060_p6 hypothetical protein phrog_1718 tail protein tail 1 3625 3885
AVJ49144.1 MG920060_p37 hypothetical protein phrog_1966 unknown function unknown function -1 30556 30786
AVJ49146.1 MG920060_p39 hypothetical protein phrog_1860 unknown function unknown function -1 30950 31045
AVJ49176.1 MG920060_p70 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43004 43804
AVJ49117.1 MG920060_p9 lysin B phrog_102 endolysin lysis 1 5573 6541
AVJ49190.1 MG920060_p84 hypothetical protein phrog_932 unknown function unknown function -1 48817 48966
AVJ49142.1 MG920060_p35 hypothetical protein phrog_411 unknown function unknown function 1 28484 28780
AVJ49154.1 MG920060_p47 helix-turn-helix DNA binding protein phrog_354 sigma-K factor transcription regulation -1 34740 35555
AVJ49136.1 MG920060_p29 minor tail protein phrog_1397 unknown function unknown function 1 23306 23599
AVJ49191.1 MG920060_p85 hypothetical protein phrog_4631 unknown function unknown function -1 48963 49280
AVJ49139.1 MG920060_p32 hypothetical protein phrog_644 unknown function unknown function 1 27042 27362
AVJ49141.1 MG920060_p34 hypothetical protein phrog_754 minor tail protein tail 1 27560 28363
AVJ49171.1 MG920060_p65 hypothetical protein phrog_2507 unknown function unknown function -1 41895 42068
AVJ49153.1 MG920060_p46 hypothetical protein phrog_499 unknown function unknown function -1 34561 34743
AVJ49165.1 MG920060_p59 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39782 40291
AVJ49122.1 MG920060_p14 major capsid protein phrog_10 major head protein head and packaging 1 11147 12148
AVJ49189.1 MG920060_p83 hypothetical protein phrog_9318 unknown function unknown function -1 48628 48798
AVJ49140.1 MG920060_p33 hypothetical protein phrog_1560 unknown function unknown function 1 27372 27563
AVJ49178.1 MG920060_p72 helix-turn-helix DNA binding domain protein phrog_4285 transposase integration and excision -1 44155 44862
AVJ49151.1 MG920060_p44 hypothetical protein phrog_1781 unknown function unknown function -1 33812 34042
AVJ49180.1 MG920060_p74 hypothetical protein phrog_1584 unknown function unknown function -1 45867 46184
AVJ49126.1 MG920060_p18 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13274 13669
AVJ49160.1 MG920060_p53 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37246 37824
AVJ49127.1 MG920060_p19 head-to-tail connector complex protein phrog_123 tail terminator connector 1 13673 14119
AVJ49152.1 MG920060_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34073 34564
AVJ49125.1 MG920060_p17 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 12912 13274
AVJ49121.1 MG920060_p13 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10625 11137
AVJ49197.1 MG920060_p91 hypothetical protein phrog_11620 unknown function unknown function 1 50790 50954
AVJ49188.1 MG920060_p82 hypothetical protein phrog_2093 unknown function unknown function -1 48506 48631
AVJ49195.1 MG920060_p89 hypothetical protein phrog_2985 unknown function unknown function 1 50349 50504
AVJ49145.1 MG920060_p38 hypothetical protein phrog_2035 unknown function unknown function -1 30783 30953
AVJ49124.1 MG920060_p16 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 12463 12912
AVJ49110.1 MG920060_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 748 1044
AVJ49148.1 MG920060_p41 hypothetical protein phrog_383 unknown function unknown function -1 31326 31682
AVJ49162.1 MG920060_p56 hypothetical protein phrog_5801 unknown function unknown function -1 38271 38342
AVJ49150.1 MG920060_p43 hypothetical protein phrog_6173 unknown function unknown function -1 33561 33815
AVJ49196.1 MG920060_p90 hypothetical protein phrog_828 unknown function unknown function 1 50587 50793
AVJ49186.1 MG920060_p80 hypothetical protein phrog_1155 unknown function unknown function -1 48154 48342
AVJ49163.1 MG920060_p57 hypothetical protein phrog_397 unknown function unknown function -1 38339 38473
AVJ49182.1 MG920060_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46618 47130
AVJ49173.1 MG920060_p67 hypothetical protein phrog_520 unknown function unknown function -1 42181 42474
AVJ49170.1 MG920060_p64 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41074 41895
AVJ49132.1 MG920060_p25 minor tail protein phrog_1543 minor tail protein tail 1 20491 20673
AVJ49167.1 MG920060_p61 hypothetical protein phrog_2591 unknown function unknown function -1 40402 40650
AVJ49120.1 MG920060_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9685 10566
AVJ49175.1 MG920060_p69 helix-turn-helix DNA binding protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42795 42977
AVJ49113.1 MG920060_p5 hypothetical protein phrog_553 minor tail protein tail 1 2926 3615
AVJ49147.1 MG920060_p40 hypothetical protein phrog_1971 unknown function unknown function -1 31042 31329
AVJ49181.1 MG920060_p75 hypothetical protein phrog_1809 unknown function unknown function -1 46181 46576
AVJ49157.1 MG920060_p50 hypothetical protein phrog_1503 unknown function unknown function -1 36457 36636
AVJ49155.1 MG920060_p48 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 35548 35688
AVJ49158.1 MG920060_p51 hypothetical protein phrog_474 phosphofructokinase other -1 36633 37043
AVJ49131.1 MG920060_p24 minor tail protein phrog_106 minor tail protein tail 1 18415 20472
AVJ49185.1 MG920060_p79 hypothetical protein phrog_1387 unknown function unknown function -1 47954 48157
AVJ49149.1 MG920060_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 31710 33539
AVJ49168.1 MG920060_p62 hypothetical protein phrog_9840 unknown function unknown function -1 40650 40781
AVJ49187.1 MG920060_p81 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48342 48509
AVJ49199.1 MG920060_p93 hypothetical protein phrog_3574 unknown function unknown function 1 51264 51452
AVJ49135.1 MG920060_p28 minor tail protein phrog_981 minor tail protein tail 1 22971 23303
AVJ49177.1 MG920060_p71 hypothetical protein phrog_8167 unknown function unknown function -1 43804 44139
AVJ49193.1 MG920060_p87 hypothetical protein phrog_5533 unknown function unknown function -1 49899 50084
AVJ49161.1 MG920060_p55 hypothetical protein phrog_1783 unknown function unknown function -1 38107 38271
AVJ49172.1 MG920060_p66 hypothetical protein phrog_1705 unknown function unknown function -1 42065 42184
AVJ49201.1 MG920060_p22 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15100 15477
AVJ49192.1 MG920060_p86 hypothetical protein phrog_5017 unknown function unknown function -1 49552 49899
AVJ49166.1 MG920060_p60 hypothetical protein phrog_1019 unknown function unknown function -1 40278 40364
AVJ49138.1 MG920060_p31 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 25471 26949
AVJ49143.1 MG920060_p36 integrase phrog_95 integrase integration and excision 1 28857 30434
AVJ49112.1 MG920060_p4 hypothetical protein phrog_1197 tail protein tail 1 1846 2916
AVJ49169.1 MG920060_p63 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40778 41074
AVJ49202.1 MG920060_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 37613 38128
AVJ49184.1 MG920060_p78 hypothetical protein phrog_1720 unknown function unknown function -1 47688 47855
AVJ49198.1 MG920060_p92 hypothetical protein phrog_13961 unknown function unknown function -1 50998 51183