Genomic map of Mycobacterium phage ChaChing (MG925338)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG925338
Definition
Mycobacterium phage ChaChing, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
NUCCORE
Length
68668
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
67.5
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ49322.1 MG925338_p59 hypothetical protein phrog_6482 unknown function unknown function -1 53696 53971
AVJ49342.1 MG925338_p79 hypothetical protein phrog_6691 unknown function unknown function -1 60673 60885
AVJ49290.1 MG925338_p26 tail assembly chaperone phrog_5 tail completion or Neck1 protein connector 1 19378 19791
AVJ49281.1 MG925338_p17 hypothetical protein phrog_565 holin lysis 1 14581 14964
AVJ49289.1 MG925338_p25 hypothetical protein phrog_901 unknown function unknown function 1 19023 19394
AVJ49270.1 MG925338_p6 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2714 4471
AVJ49296.1 MG925338_p32 minor tail protein phrog_356 minor tail protein tail 1 30855 32237
AVJ49326.1 MG925338_p63 hypothetical protein phrog_6735 unknown function unknown function -1 55021 55140
AVJ49328.1 MG925338_p65 hypothetical protein phrog_6105 unknown function unknown function -1 55404 55754
AVJ49266.1 MG925338_p2 hypothetical protein phrog_6919 unknown function unknown function 1 690 854
AVJ49298.1 MG925338_p34 minor tail protein phrog_240 head protein head and packaging 1 33463 33846
AVJ49265.1 MG925338_p1 ParB-like nuclease domain phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 693
AVJ49351.1 MG925338_p88 hypothetical protein phrog_7490 unknown function unknown function -1 62810 62998
AVJ49272.1 MG925338_p8 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4860 5429
AVJ49347.1 MG925338_p84 hypothetical protein phrog_6338 unknown function unknown function -1 61696 61854
AVJ49320.1 MG925338_p57 hypothetical protein phrog_6342 unknown function unknown function -1 51109 51882
AVJ49285.1 MG925338_p21 major tail protein phrog_792 major tail protein tail 1 16372 17451
AVJ49274.1 MG925338_p10 hypothetical protein phrog_781 unknown function unknown function 1 5964 6299
AVJ49275.1 MG925338_p11 portal protein phrog_776 portal protein head and packaging 1 6329 8233
AVJ49301.1 MG925338_p37 minor tail protein phrog_282 unknown function unknown function 1 34941 35540
AVJ49306.1 MG925338_p42 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38025 38750
AVJ49341.1 MG925338_p78 hypothetical protein phrog_4974 unknown function unknown function -1 60430 60618
AVJ49360.1 MG925338_p97 hydrolase phrog_1221 unknown function unknown function -1 65850 67052
AVJ49316.1 MG925338_p53 hypothetical protein phrog_6400 unknown function unknown function -1 47265 47627
AVJ49335.1 MG925338_p72 hypothetical protein phrog_1031 unknown function unknown function 1 58540 58944
AVJ49300.1 MG925338_p36 minor tail protein phrog_282 unknown function unknown function 1 34291 34944
AVJ49297.1 MG925338_p33 minor tail protein phrog_416 minor tail protein tail 1 32234 33436
AVJ49340.1 MG925338_p77 DNA binding domain protein phrog_928 unknown function unknown function 1 59890 60417
AVJ49283.1 MG925338_p19 hypothetical protein phrog_2344 unknown function unknown function 1 15476 15955
AVJ49321.1 MG925338_p58 DNA primase/polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 51879 53696
AVJ49293.1 MG925338_p29 minor tail protein phrog_838 unknown function unknown function 1 26161 27591
AVJ49339.1 MG925338_p76 hypothetical protein phrog_6229 unknown function unknown function 1 59564 59908
AVJ49309.1 MG925338_p45 hypothetical protein phrog_636 unknown function unknown function -1 39521 40219
AVJ49287.1 MG925338_p23 hypothetical protein phrog_783 head-tail adaptor connector 1 17736 18494
AVJ49294.1 MG925338_p30 minor tail protein phrog_837 minor tail protein tail 1 27588 28631
AVJ49307.1 MG925338_p43 DNA binding domain protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 38806 39042
AVJ49353.1 MG925338_p90 hypothetical protein phrog_5355 unknown function unknown function -1 63301 63456
AVJ49310.1 MG925338_p46 lysin A phrog_700 endolysin lysis 1 40324 41547
AVJ49313.1 MG925338_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43277 44890
AVJ49312.1 MG925338_p48 hypothetical protein phrog_870 unknown function unknown function -1 42682 43227
AVJ49302.1 MG925338_p38 hypothetical protein phrog_3329 unknown function unknown function 1 35537 36886
AVJ49348.1 MG925338_p85 hypothetical protein phrog_4392 unknown function unknown function -1 61847 62197
AVJ49295.1 MG925338_p31 minor tail protein phrog_746 minor tail protein tail 1 28628 30853
AVJ49333.1 MG925338_p70 hypothetical protein phrog_4938 unknown function unknown function 1 57775 57939
AVJ49357.1 MG925338_p94 hypothetical protein phrog_6114 unknown function unknown function -1 64547 64726
AVJ49292.1 MG925338_p28 tapemeasure protein phrog_934 tail length tape measure protein tail 1 20410 26151
AVJ49356.1 MG925338_p93 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64167 64547
AVJ49345.1 MG925338_p82 hypothetical protein phrog_6304 unknown function unknown function -1 61368 61532
AVJ49334.1 MG925338_p71 helix-turn-helix DNA binding domain protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 57936 58535
AVJ49299.1 MG925338_p35 minor tail protein phrog_948 unknown function unknown function 1 33855 34280
AVJ49354.1 MG925338_p91 hypothetical protein phrog_6199 unknown function unknown function -1 63531 63914
AVJ49314.1 MG925338_p50 hypothetical protein phrog_7519 unknown function unknown function -1 44890 45111
AVJ49331.1 MG925338_p68 DNA binding domain protein phrog_1016 unknown function unknown function 1 57264 57551
AVJ49279.1 MG925338_p15 hypothetical protein phrog_779 unknown function unknown function 1 13155 13964
AVJ49269.1 MG925338_p5 ParB-like nuclease domain phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2148 2717
AVJ49350.1 MG925338_p87 hypothetical protein phrog_7414 unknown function unknown function -1 62526 62813
AVJ49280.1 MG925338_p16 hypothetical protein phrog_970 unknown function unknown function 1 13979 14584
AVJ49359.1 MG925338_p96 hypothetical protein phrog_1010 unknown function unknown function -1 65288 65776
AVJ49346.1 MG925338_p83 hypothetical protein phrog_6460 unknown function unknown function -1 61529 61699
AVJ49278.1 MG925338_p14 major capsid protein phrog_777 major head protein head and packaging 1 11041 13056
AVJ49355.1 MG925338_p92 hypothetical protein phrog_6428 unknown function unknown function -1 63955 64167
AVJ49363.1 MG925338_p100 hypothetical protein phrog_5733 unknown function unknown function 1 67628 67873
AVJ49336.1 MG925338_p73 hypothetical protein phrog_4885 unknown function unknown function 1 58951 59208
AVJ49358.1 MG925338_p95 hypothetical protein phrog_6469 unknown function unknown function -1 64723 65190
AVJ49317.1 MG925338_p54 hypothetical protein phrog_3892 unknown function unknown function -1 47627 47956
AVJ49362.1 MG925338_p99 hypothetical protein phrog_4825 unknown function unknown function 1 67444 67617
AVJ49327.1 MG925338_p64 hypothetical protein phrog_6656 unknown function unknown function -1 55177 55407
AVJ49319.1 MG925338_p56 RepA phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 48469 51075
AVJ49305.1 MG925338_p41 hypothetical protein phrog_892 tail fiber protein tail 1 37615 38025
AVJ49291.1 MG925338_p27 tail assembly chaperone phrog_1118 tail assembly chaperone tail 1 19791 20384
AVJ49277.1 MG925338_p13 hypothetical protein phrog_2069 unknown function unknown function 1 10655 10861
AVJ49330.1 MG925338_p67 hypothetical protein phrog_996 unknown function unknown function 1 56500 57267
AVJ49349.1 MG925338_p86 hypothetical protein phrog_7541 unknown function unknown function -1 62197 62529
AVJ49323.1 MG925338_p60 hypothetical protein phrog_6936 unknown function unknown function -1 53968 54105
AVJ49318.1 MG925338_p55 hypothetical protein phrog_1371 unknown function unknown function -1 47953 48426
AVJ49276.1 MG925338_p12 capsid morphogenesis protein phrog_859 portal protein head and packaging 1 8223 10655
AVJ49271.1 MG925338_p7 hypothetical protein phrog_6317 unknown function unknown function -1 4612 4863
AVJ49337.1 MG925338_p74 hypothetical protein phrog_1306 unknown function unknown function -1 59221 59391
AVJ49338.1 MG925338_p75 hypothetical protein phrog_6511 unknown function unknown function 1 59410 59562
AVJ49329.1 MG925338_p66 hypothetical protein phrog_982 unknown function unknown function -1 55831 56100
AVJ49367.1 MG925338_p51 hypothetical protein phrog_780 unknown function unknown function -1 45158 45427
AVJ49267.1 MG925338_p3 hypothetical protein phrog_6307 unknown function unknown function 1 851 1072
AVJ49364.1 MG925338_p101 hypothetical protein phrog_6097 unknown function unknown function 1 67870 68106
AVJ49361.1 MG925338_p98 hypothetical protein phrog_2972 unknown function unknown function -1 67036 67266
AVJ49288.1 MG925338_p24 hypothetical protein phrog_810 unknown function unknown function 1 18491 19012
AVJ49286.1 MG925338_p22 hypothetical protein phrog_6514 unknown function unknown function -1 17513 17623
AVJ49344.1 MG925338_p81 hypothetical protein phrog_4461 unknown function unknown function -1 61273 61371
AVJ49268.1 MG925338_p4 PAPS reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1069 2151
AVJ49303.1 MG925338_p39 hypothetical protein phrog_915 unknown function unknown function 1 36909 37277
AVJ49308.1 MG925338_p44 helix-turn-helix DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39039 39524
AVJ49365.1 MG925338_p102 hypothetical protein phrog_6432 unknown function unknown function 1 68097 68252
AVJ49273.1 MG925338_p9 hypothetical protein phrog_6276 unknown function unknown function -1 5563 5859
AVJ49352.1 MG925338_p89 HicA-like toxin phrog_2089 unknown function unknown function -1 63092 63304
AVJ49324.1 MG925338_p61 hypothetical protein phrog_3025 unknown function unknown function -1 54102 54548
AVJ49284.1 MG925338_p20 hypothetical protein phrog_2525 unknown function unknown function 1 15952 16284
AVJ49282.1 MG925338_p18 hypothetical protein phrog_2272 unknown function unknown function 1 15018 15479
AVJ49311.1 MG925338_p47 lysin B phrog_102 endolysin lysis 1 41548 42612
AVJ49343.1 MG925338_p80 HNH endonuclease phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60951 61280
AVJ49304.1 MG925338_p40 hypothetical protein phrog_941 unknown function unknown function 1 37361 37597
AVJ49366.1 MG925338_p103 hypothetical protein phrog_5930 unknown function unknown function 1 68317 68619
AVJ49325.1 MG925338_p62 hypothetical protein phrog_993 unknown function unknown function -1 54545 55021
AVJ49332.1 MG925338_p69 hypothetical protein phrog_6404 unknown function unknown function 1 57548 57778
AVJ49315.1 MG925338_p52 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 45473 47170