| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG925340 |
Definition |
Mycobacterium phage Corvo, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
53325 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
63.66 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ49507.1 | MG925340_p41 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32455 | 32625 |
| AVJ49522.1 | MG925340_p57 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 40527 | 40691 |
| AVJ49513.1 | MG925340_p47 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 35364 | 35594 |
| AVJ49546.1 | MG925340_p81 | hypothetical protein | phrog_6510 | unknown function | unknown function | -1 | 49032 | 49214 |
| AVJ49510.1 | MG925340_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32995 | 33354 |
| AVJ49524.1 | MG925340_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 40759 | 40902 |
| AVJ49556.1 | MG925340_p91 | hypothetical protein | phrog_2985 | unknown function | unknown function | -1 | 51961 | 52104 |
| AVJ49486.1 | MG925340_p19 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14179 | 14574 |
| AVJ49502.1 | MG925340_p36 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28990 | 29778 |
| AVJ49551.1 | MG925340_p86 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 50110 | 50277 |
| AVJ49530.1 | MG925340_p65 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 42907 | 43053 |
| AVJ49477.1 | MG925340_p10 | lysin B | phrog_102 | endolysin | lysis | 1 | 6181 | 7149 |
| AVJ49506.1 | MG925340_p40 | hypothetical protein | phrog_6549 | unknown function | unknown function | -1 | 32270 | 32455 |
| AVJ49492.1 | MG925340_p26 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19795 | 21852 |
| AVJ49471.1 | MG925340_p4 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1868 | 2179 |
| AVJ49470.1 | MG925340_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1082 | 1522 |
| AVJ49559.1 | MG925340_p94 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 52792 | 52995 |
| AVJ49540.1 | MG925340_p75 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 46773 | 47090 |
| AVJ49549.1 | MG925340_p84 | hypothetical protein | phrog_12963 | unknown function | unknown function | -1 | 49593 | 49829 |
| AVJ49552.1 | MG925340_p87 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 50274 | 50402 |
| AVJ49560.1 | MG925340_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15992 | 16369 |
| AVJ49544.1 | MG925340_p79 | hypothetical protein | phrog_6474 | recombination directionality factor | integration and excision | -1 | 48590 | 48769 |
| AVJ49519.1 | MG925340_p53 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 38936 | 39106 |
| AVJ49516.1 | MG925340_p50 | helix-turn-helix DNA binding protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36292 | 37083 |
| AVJ49537.1 | MG925340_p72 | hypothetical protein | phrog_4604 | unknown function | unknown function | -1 | 46045 | 46506 |
| AVJ49504.1 | MG925340_p38 | integrase | phrog_95 | integrase | integration and excision | 1 | 30261 | 31844 |
| AVJ49484.1 | MG925340_p17 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13368 | 13817 |
| AVJ49518.1 | MG925340_p52 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 37221 | 38939 |
| AVJ49505.1 | MG925340_p39 | hypothetical protein | phrog_12181 | unknown function | unknown function | -1 | 31965 | 32273 |
| AVJ49543.1 | MG925340_p78 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48298 | 48597 |
| AVJ49547.1 | MG925340_p82 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49211 | 49411 |
| AVJ49478.1 | MG925340_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7169 | 8857 |
| AVJ49481.1 | MG925340_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11232 | 11744 |
| AVJ49536.1 | MG925340_p71 | hypothetical protein | phrog_4285 | transposase | integration and excision | -1 | 44997 | 45749 |
| AVJ49553.1 | MG925340_p88 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 50568 | 50720 |
| AVJ49509.1 | MG925340_p43 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32714 | 32998 |
| AVJ49539.1 | MG925340_p74 | hypothetical protein | phrog_5947 | unknown function | unknown function | -1 | 46609 | 46776 |
| AVJ49557.1 | MG925340_p92 | hypothetical protein | phrog_10288 | unknown function | unknown function | -1 | 52325 | 52564 |
| AVJ49490.1 | MG925340_p24 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16803 | 19274 |
| AVJ49487.1 | MG925340_p20 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 14578 | 15024 |
| AVJ49482.1 | MG925340_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11755 | 12771 |
| AVJ49489.1 | MG925340_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15992 | 16791 |
| AVJ49517.1 | MG925340_p51 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 37076 | 37216 |
| AVJ49541.1 | MG925340_p76 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 47087 | 47482 |
| AVJ49494.1 | MG925340_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 22053 | 23855 |
| AVJ49472.1 | MG925340_p5 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2440 | 3510 |
| AVJ49508.1 | MG925340_p42 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32622 | 32717 |
| AVJ49479.1 | MG925340_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8854 | 10296 |
| AVJ49545.1 | MG925340_p80 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 48766 | 49035 |
| AVJ49532.1 | MG925340_p67 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 43340 | 43660 |
| AVJ49499.1 | MG925340_p33 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26896 | 28380 |
| AVJ49528.1 | MG925340_p63 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 41845 | 42111 |
| AVJ49521.1 | MG925340_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39666 | 40187 |
| AVJ49550.1 | MG925340_p85 | hypothetical protein | phrog_16402 | unknown function | unknown function | -1 | 49826 | 49972 |
| AVJ49531.1 | MG925340_p66 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43050 | 43343 |
| AVJ49498.1 | MG925340_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 25050 | 26903 |
| AVJ49493.1 | MG925340_p27 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 21871 | 22053 |
| AVJ49512.1 | MG925340_p46 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 35242 | 35367 |
| AVJ49476.1 | MG925340_p9 | lysin A | phrog_317 | endolysin | lysis | 1 | 4770 | 6191 |
| AVJ49548.1 | MG925340_p83 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 49408 | 49596 |
| AVJ49501.1 | MG925340_p35 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28799 | 28990 |
| AVJ49542.1 | MG925340_p77 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 47524 | 48036 |
| AVJ49527.1 | MG925340_p62 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 41459 | 41848 |
| AVJ49468.1 | MG925340_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 602 | 754 |
| AVJ49511.1 | MG925340_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33375 | 35201 |
| AVJ49475.1 | MG925340_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4503 | 4760 |
| AVJ49554.1 | MG925340_p89 | hypothetical protein | phrog_7647 | unknown function | unknown function | -1 | 50717 | 50944 |
| AVJ49497.1 | MG925340_p31 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 24678 | 25025 |
| AVJ49500.1 | MG925340_p34 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28389 | 28790 |
| AVJ49534.1 | MG925340_p69 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43873 | 44673 |
| AVJ49495.1 | MG925340_p29 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 23891 | 24337 |
| AVJ49503.1 | MG925340_p37 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29899 | 30195 |
| AVJ49526.1 | MG925340_p61 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 41376 | 41462 |
| AVJ49473.1 | MG925340_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3520 | 4221 |
| AVJ49483.1 | MG925340_p16 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12850 | 13368 |
| AVJ49535.1 | MG925340_p70 | hypothetical protein | phrog_8167 | unknown function | unknown function | -1 | 44673 | 44981 |
| AVJ49558.1 | MG925340_p93 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 52593 | 52736 |
| AVJ49523.1 | MG925340_p58 | hypothetical protein | phrog_5801 | unknown function | unknown function | -1 | 40691 | 40762 |
| AVJ49555.1 | MG925340_p90 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 51351 | 51635 |
| AVJ49561.1 | MG925340_p56 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 40033 | 40548 |
| AVJ49515.1 | MG925340_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36113 | 36295 |
| AVJ49533.1 | MG925340_p68 | helix-turn-helix DNA binding protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 43664 | 43846 |
| AVJ49529.1 | MG925340_p64 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42111 | 42920 |
| AVJ49485.1 | MG925340_p18 | head-to-tail connector complex protein | phrog_320 | head closure Hc1 | connector | 1 | 13817 | 14179 |
| AVJ49520.1 | MG925340_p54 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 39103 | 39669 |
| AVJ49491.1 | MG925340_p25 | HNH endonuclease | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 19271 | 19771 |
| AVJ49488.1 | MG925340_p21 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15033 | 15881 |
| AVJ49474.1 | MG925340_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 4235 | 4495 |
| AVJ49480.1 | MG925340_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10293 | 11174 |
| AVJ49514.1 | MG925340_p48 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35625 | 36116 |
| AVJ49525.1 | MG925340_p60 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 40922 | 41389 |
| AVJ49496.1 | MG925340_p30 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 24334 | 24681 |
| AVJ49538.1 | MG925340_p73 | hypothetical protein | phrog_6068 | unknown function | unknown function | -1 | 46503 | 46616 |
| AVJ49469.1 | MG925340_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 751 | 1047 |