| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG925343 |
Definition |
Microbacterium phage Golden, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kojivirus; Microbacterium virus Golden. |
DB of origin |
NUCCORE |
Length |
39640 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
64.08 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ49769.1 | MG925343_p22 | hypothetical protein | phrog_4108 | unknown function | unknown function | 1 | 16059 | 16544 |
| AVJ49782.1 | MG925343_p35 | hypothetical protein | phrog_17918 | unknown function | unknown function | -1 | 25457 | 25597 |
| AVJ49773.1 | MG925343_p26 | holin | phrog_1299 | holin | lysis | 1 | 20129 | 20422 |
| AVJ49792.1 | MG925343_p45 | hypothetical protein | phrog_19208 | unknown function | unknown function | -1 | 33231 | 33539 |
| AVJ49767.1 | MG925343_p20 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 15271 | 15459 |
| AVJ49755.1 | MG925343_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5769 | 6020 |
| AVJ49800.1 | MG925343_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36636 | 36794 |
| AVJ49765.1 | MG925343_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 12073 | 12846 |
| AVJ49786.1 | MG925343_p39 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 29256 | 30647 |
| AVJ49798.1 | MG925343_p51 | hypothetical protein | phrog_27572 | unknown function | unknown function | -1 | 35701 | 35886 |
| AVJ49758.1 | MG925343_p10 | hypothetical protein | phrog_4111 | unknown function | unknown function | 1 | 6844 | 7251 |
| AVJ49766.1 | MG925343_p19 | minor tail protein | phrog_3475 | minor tail protein | tail | 1 | 12846 | 15269 |
| AVJ49752.1 | MG925343_p4 | capsid maturation protease | phrog_1657 | head morphogenesis | head and packaging | 1 | 3365 | 4084 |
| AVJ49751.1 | MG925343_p3 | portal protein | phrog_4142 | portal protein | head and packaging | 1 | 2023 | 3363 |
| AVJ49771.1 | MG925343_p24 | lysin A | phrog_7698 | endolysin | lysis | 1 | 18704 | 19696 |
| AVJ49795.1 | MG925343_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34806 | 35030 |
| AVJ49787.1 | MG925343_p40 | hypothetical protein | phrog_29789 | unknown function | unknown function | -1 | 30644 | 30784 |
| AVJ49793.1 | MG925343_p46 | hypothetical protein | phrog_4198 | unknown function | unknown function | -1 | 33598 | 33894 |
| AVJ49770.1 | MG925343_p23 | minor tail protein | phrog_3432 | minor tail protein | tail | 1 | 16544 | 18673 |
| AVJ49762.1 | MG925343_p14 | major tail protein | phrog_2491 | major tail protein | tail | 1 | 8183 | 8680 |
| AVJ49797.1 | MG925343_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35287 | 35658 |
| AVJ49785.1 | MG925343_p38 | hypothetical protein | phrog_4077 | unknown function | unknown function | -1 | 28751 | 29182 |
| AVJ49776.1 | MG925343_p29 | hypothetical protein | phrog_4265 | unknown function | unknown function | -1 | 20895 | 21794 |
| AVJ49774.1 | MG925343_p27 | hypothetical protein | phrog_4288 | unknown function | unknown function | -1 | 20483 | 20665 |
| AVJ49781.1 | MG925343_p34 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24795 | 25460 |
| AVJ49790.1 | MG925343_p43 | hypothetical protein | phrog_4086 | unknown function | unknown function | -1 | 31837 | 32643 |
| AVJ49753.1 | MG925343_p5 | scaffolding protein | phrog_4080 | scaffolding protein | head and packaging | 1 | 4194 | 4760 |
| AVJ49806.1 | MG925343_p15 | tail assembly chaperone | phrog_18843 | tail assembly chaperone | tail | 1 | 8708 | 9645 |
| AVJ49804.1 | MG925343_p57 | hypothetical protein | phrog_10754 | unknown function | unknown function | 1 | 38923 | 39162 |
| AVJ49779.1 | MG925343_p32 | nuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23739 | 24032 |
| AVJ49780.1 | MG925343_p33 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 24036 | 24767 |
| AVJ49783.1 | MG925343_p36 | exonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25594 | 26754 |
| AVJ49768.1 | MG925343_p21 | hypothetical protein | phrog_4065 | unknown function | unknown function | 1 | 15460 | 16059 |
| AVJ49784.1 | MG925343_p37 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 26732 | 28582 |
| AVJ49750.1 | MG925343_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 608 | 2020 |
| AVJ49763.1 | MG925343_p16 | tail assembly chaperone | phrog_4129 | tail assembly chaperone | tail | 1 | 8708 | 9262 |
| AVJ49754.1 | MG925343_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4803 | 5765 |
| AVJ49772.1 | MG925343_p25 | membrane protein | phrog_4153 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19746 | 20129 |
| AVJ49796.1 | MG925343_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35050 | 35253 |
| AVJ49799.1 | MG925343_p52 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 35883 | 36611 |
| AVJ49794.1 | MG925343_p47 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 33891 | 34697 |
| AVJ49778.1 | MG925343_p31 | DNA recombinase | phrog_3123 | unknown function | unknown function | -1 | 22096 | 23730 |
| AVJ49777.1 | MG925343_p30 | hypothetical protein | phrog_9034 | unknown function | unknown function | -1 | 21827 | 22099 |
| AVJ49803.1 | MG925343_p56 | hypothetical protein | phrog_4362 | unknown function | unknown function | -1 | 38285 | 38623 |
| AVJ49788.1 | MG925343_p41 | hypothetical protein | phrog_19027 | unknown function | unknown function | -1 | 30784 | 31008 |
| AVJ49749.1 | MG925343_p1 | hypothetical protein | phrog_3678 | unknown function | unknown function | 1 | 1 | 615 |
| AVJ49760.1 | MG925343_p12 | hypothetical protein | phrog_4076 | unknown function | unknown function | 1 | 7592 | 7954 |
| AVJ49791.1 | MG925343_p44 | thymidylate kinase | phrog_4121 | thymidylate kinase | other | -1 | 32621 | 33208 |
| AVJ49759.1 | MG925343_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7248 | 7589 |
| AVJ49775.1 | MG925343_p28 | hypothetical protein | phrog_33351 | unknown function | unknown function | -1 | 20677 | 20871 |
| AVJ49789.1 | MG925343_p42 | nucleotide pyrophosphohydrolase | phrog_4159 | nucleotide pyrophosphohydrolase | other | -1 | 31010 | 31840 |
| AVJ49801.1 | MG925343_p54 | hypothetical protein | phrog_2396 | unknown function | unknown function | -1 | 36818 | 37690 |
| AVJ49756.1 | MG925343_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6075 | 6431 |
| AVJ49805.1 | MG925343_p58 | hypothetical protein | phrog_4232 | unknown function | unknown function | 1 | 39155 | 39577 |
| AVJ49761.1 | MG925343_p13 | hypothetical protein | phrog_4058 | unknown function | unknown function | 1 | 7951 | 8181 |
| AVJ49764.1 | MG925343_p17 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9668 | 12076 |
| AVJ49757.1 | MG925343_p9 | hypothetical protein | phrog_4055 | unknown function | unknown function | 1 | 6450 | 6872 |
| AVJ49802.1 | MG925343_p55 | hypothetical protein | phrog_800 | terminase small subunit | head and packaging | -1 | 37683 | 38288 |