Genomic map of Mycobacterium phage Ichabod (MG925344)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG925344
Definition
Mycobacterium phage Ichabod, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
53317
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
63.75
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ49861.1 MG925344_p57 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39908 40432
AVJ49807.1 MG925344_p1 hypothetical protein phrog_4649 unknown function unknown function 1 600 752
AVJ49850.1 MG925344_p46 hypothetical protein phrog_542 unknown function unknown function -1 34878 35000
AVJ49815.1 MG925344_p9 lysin B phrog_102 endolysin lysis 1 5749 6717
AVJ49814.1 MG925344_p8 lysin A phrog_317 endolysin lysis 1 4326 5759
AVJ49863.1 MG925344_p60 hypothetical protein phrog_5801 unknown function unknown function -1 40930 41007
AVJ49834.1 MG925344_p29 minor tail protein phrog_981 minor tail protein tail 1 23588 23920
AVJ49851.1 MG925344_p47 hypothetical protein phrog_1781 unknown function unknown function -1 34997 35227
AVJ49833.1 MG925344_p28 minor tail protein phrog_352 minor tail protein tail 1 23130 23576
AVJ49855.1 MG925344_p51 helix-turn-helix DNA binding protein phrog_354 sigma-K factor transcription regulation -1 36307 37098
AVJ49871.1 MG925344_p68 hypothetical protein phrog_1705 unknown function unknown function -1 43383 43502
AVJ49896.1 MG925344_p93 hypothetical protein phrog_2212 unknown function unknown function -1 52134 52232
AVJ49852.1 MG925344_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35270 35764
AVJ49809.1 MG925344_p3 hypothetical protein phrog_226 minor tail protein tail 1 1080 1520
AVJ49828.1 MG925344_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15567 16360
AVJ49846.1 MG925344_p41 hypothetical protein phrog_1971 unknown function unknown function -1 31742 32035
AVJ49898.1 MG925344_p95 hypothetical protein phrog_828 unknown function unknown function -1 52720 52974
AVJ49860.1 MG925344_p56 hypothetical protein phrog_8843 unknown function unknown function -1 39690 39911
AVJ49879.1 MG925344_p76 hypothetical protein phrog_1809 unknown function unknown function -1 46180 46575
AVJ49841.1 MG925344_p36 hypothetical protein phrog_411 unknown function unknown function 1 29148 29444
AVJ49888.1 MG925344_p85 hypothetical protein phrog_932 unknown function unknown function -1 48819 48968
AVJ49842.1 MG925344_p37 integrase phrog_95 integrase integration and excision 1 29525 31093
AVJ49836.1 MG925344_p31 minor tail protein phrog_346 minor tail protein tail 1 24289 26142
AVJ49897.1 MG925344_p94 hypothetical protein phrog_5419 unknown function unknown function -1 52310 52639
AVJ49840.1 MG925344_p35 minor tail protein phrog_754 minor tail protein tail 1 28224 29027
AVJ49876.1 MG925344_p73 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 45076 45654
AVJ49844.1 MG925344_p39 hypothetical protein phrog_2035 unknown function unknown function -1 31483 31653
AVJ49900.1 MG925344_p58 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 40278 40793
AVJ49884.1 MG925344_p81 hypothetical protein phrog_1155 unknown function unknown function -1 48153 48341
AVJ49870.1 MG925344_p67 hypothetical protein phrog_2507 unknown function unknown function -1 43213 43386
AVJ49859.1 MG925344_p55 hypothetical protein phrog_1167 phosphofructokinase other -1 39127 39693
AVJ49822.1 MG925344_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12707 12943
AVJ49820.1 MG925344_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11096 11608
AVJ49832.1 MG925344_p27 minor tail protein phrog_110 minor tail protein tail 1 21290 23092
AVJ49877.1 MG925344_p74 hypothetical protein phrog_1311 unknown function unknown function -1 45738 45875
AVJ49869.1 MG925344_p66 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42392 43213
AVJ49821.1 MG925344_p15 major capsid protein phrog_10 major head protein head and packaging 1 11618 12628
AVJ49881.1 MG925344_p78 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47391 47690
AVJ49816.1 MG925344_p10 hypothetical protein phrog_419 unknown function unknown function 1 6739 7011
AVJ49878.1 MG925344_p75 hypothetical protein phrog_658 unknown function unknown function -1 45875 46183
AVJ49830.1 MG925344_p25 minor tail protein phrog_106 minor tail protein tail 1 19054 21111
AVJ49874.1 MG925344_p71 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44113 44295
AVJ49831.1 MG925344_p26 minor tail protein phrog_1543 minor tail protein tail 1 21108 21290
AVJ49823.1 MG925344_p17 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 12943 13392
AVJ49875.1 MG925344_p72 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44322 45056
AVJ49853.1 MG925344_p49 hypothetical protein phrog_2094 unknown function unknown function -1 35799 36131
AVJ49890.1 MG925344_p87 DNA methylase phrog_363 DNA methyltransferase other -1 49586 50257
AVJ49847.1 MG925344_p42 hypothetical protein phrog_9812 unknown function unknown function -1 32032 32283
AVJ49845.1 MG925344_p40 hypothetical protein phrog_1860 unknown function unknown function -1 31650 31736
AVJ49829.1 MG925344_p24 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16373 19030
AVJ49887.1 MG925344_p84 hypothetical protein phrog_9318 unknown function unknown function -1 48630 48800
AVJ49808.1 MG925344_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 749 1045
AVJ49826.1 MG925344_p20 head-to-tail connector complex protein phrog_123 tail terminator connector 1 14153 14599
AVJ49864.1 MG925344_p61 hypothetical protein phrog_397 unknown function unknown function -1 41004 41147
AVJ49889.1 MG925344_p86 hypothetical protein phrog_4631 unknown function unknown function -1 48965 49282
AVJ49886.1 MG925344_p83 hypothetical protein phrog_2093 unknown function unknown function -1 48508 48633
AVJ49811.1 MG925344_p5 hypothetical protein phrog_553 minor tail protein tail 1 3086 3787
AVJ49810.1 MG925344_p4 hypothetical protein phrog_1197 tail protein tail 1 2006 3076
AVJ49854.1 MG925344_p50 hypothetical protein phrog_499 unknown function unknown function -1 36104 36310
AVJ49817.1 MG925344_p11 terminase phrog_9 terminase large subunit head and packaging 1 7032 8720
AVJ49837.1 MG925344_p32 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26135 27613
AVJ49891.1 MG925344_p88 hypothetical protein phrog_4958 unknown function unknown function -1 50262 50546
AVJ49866.1 MG925344_p63 hypothetical protein phrog_1019 unknown function unknown function -1 41642 41728
AVJ49885.1 MG925344_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48341 48511
AVJ49893.1 MG925344_p90 hypothetical protein phrog_2985 unknown function unknown function -1 51183 51338
AVJ49867.1 MG925344_p64 hypothetical protein phrog_722 unknown function unknown function -1 41725 42033
AVJ49901.1 MG925344_p44 hypothetical protein phrog_3771 unknown function unknown function -1 32676 33014
AVJ49894.1 MG925344_p91 hypothetical protein phrog_1387 unknown function unknown function -1 51590 51778
AVJ49856.1 MG925344_p52 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37091 37231
AVJ49827.1 MG925344_p21 major tail protein phrog_117 major tail protein tail 1 14608 15456
AVJ49873.1 MG925344_p70 hypothetical protein phrog_2184 unknown function unknown function -1 43789 44109
AVJ49868.1 MG925344_p65 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42126 42392
AVJ49865.1 MG925344_p62 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41167 41655
AVJ49835.1 MG925344_p30 minor tail protein phrog_1397 unknown function unknown function 1 23917 24264
AVJ49825.1 MG925344_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13754 14149
AVJ49899.1 MG925344_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15567 15938
AVJ49819.1 MG925344_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10156 11037
AVJ49824.1 MG925344_p18 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 13392 13754
AVJ49883.1 MG925344_p80 hypothetical protein phrog_1387 unknown function unknown function -1 47953 48156
AVJ49872.1 MG925344_p69 hypothetical protein phrog_520 unknown function unknown function -1 43499 43792
AVJ49813.1 MG925344_p7 hypothetical protein phrog_747 unknown function unknown function 1 4069 4326
AVJ49818.1 MG925344_p12 portal protein phrog_104 portal protein head and packaging 1 8717 10159
AVJ49848.1 MG925344_p43 hypothetical protein phrog_383 unknown function unknown function -1 32319 32675
AVJ49892.1 MG925344_p89 hypothetical protein phrog_3414 unknown function unknown function -1 50598 50882
AVJ49862.1 MG925344_p59 hypothetical protein phrog_1783 unknown function unknown function -1 40772 40921
AVJ49812.1 MG925344_p6 hypothetical protein phrog_1718 tail protein tail 1 3801 4061
AVJ49849.1 MG925344_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33011 34837
AVJ49838.1 MG925344_p33 hypothetical protein phrog_644 unknown function unknown function 1 27700 28026
AVJ49858.1 MG925344_p54 hypothetical protein phrog_1503 unknown function unknown function -1 38951 39130
AVJ49882.1 MG925344_p79 hypothetical protein phrog_1720 unknown function unknown function -1 47687 47956
AVJ49880.1 MG925344_p77 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46617 47129
AVJ49843.1 MG925344_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31214 31486
AVJ49857.1 MG925344_p53 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 37236 38954
AVJ49839.1 MG925344_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28036 28227
AVJ49895.1 MG925344_p92 hypothetical protein phrog_5542 unknown function unknown function -1 51778 52137