| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG925345 |
Definition |
Microbacterium phage Koji, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kojivirus; Microbacterium virus Koji. |
DB of origin |
NUCCORE |
Length |
39403 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
64.17 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ49928.1 | MG925345_p30 | hypothetical protein | phrog_9034 | unknown function | unknown function | -1 | 21851 | 22126 |
| AVJ49953.1 | MG925345_p55 | hypothetical protein | phrog_10754 | unknown function | unknown function | 1 | 38686 | 38925 |
| AVJ49910.1 | MG925345_p9 | hypothetical protein | phrog_4055 | unknown function | unknown function | 1 | 6488 | 6910 |
| AVJ49917.1 | MG925345_p19 | minor tail protein | phrog_3475 | minor tail protein | tail | 1 | 12893 | 15316 |
| AVJ49940.1 | MG925345_p42 | nucleotide pyrophosphohydrolase | phrog_4159 | nucleotide pyrophosphohydrolase | other | -1 | 31304 | 32119 |
| AVJ49944.1 | MG925345_p46 | hypothetical protein | phrog_4198 | unknown function | unknown function | -1 | 33891 | 34187 |
| AVJ49919.1 | MG925345_p21 | hypothetical protein | phrog_4065 | unknown function | unknown function | 1 | 15507 | 16106 |
| AVJ49945.1 | MG925345_p47 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 34184 | 34996 |
| AVJ49915.1 | MG925345_p17 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9718 | 12126 |
| AVJ49902.1 | MG925345_p1 | hypothetical protein | phrog_3678 | unknown function | unknown function | 1 | 1 | 615 |
| AVJ49933.1 | MG925345_p35 | hypothetical protein | phrog_17918 | unknown function | unknown function | -1 | 25538 | 25678 |
| AVJ49920.1 | MG925345_p22 | hypothetical protein | phrog_4108 | unknown function | unknown function | 1 | 16106 | 16591 |
| AVJ49955.1 | MG925345_p16 | tail assembly chaperone | phrog_4129 | tail assembly chaperone | tail | 1 | 8762 | 9310 |
| AVJ49931.1 | MG925345_p33 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 24063 | 24845 |
| AVJ49942.1 | MG925345_p44 | thymidylate kinase | phrog_4121 | thymidylate kinase | other | -1 | 32906 | 33493 |
| AVJ49927.1 | MG925345_p29 | hypothetical protein | phrog_4265 | unknown function | unknown function | -1 | 20919 | 21812 |
| AVJ49905.1 | MG925345_p4 | capsid maturation protease | phrog_1657 | head morphogenesis | head and packaging | 1 | 3370 | 4044 |
| AVJ49943.1 | MG925345_p45 | hypothetical protein | phrog_19208 | unknown function | unknown function | -1 | 33527 | 33829 |
| AVJ49908.1 | MG925345_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5690 | 5968 |
| AVJ49906.1 | MG925345_p5 | scaffolding protein | phrog_4080 | scaffolding protein | head and packaging | 1 | 4125 | 4673 |
| AVJ49939.1 | MG925345_p41 | hypothetical protein | phrog_19027 | unknown function | unknown function | -1 | 31087 | 31311 |
| AVJ49946.1 | MG925345_p48 | hypothetical protein | phrog_3939 | unknown function | unknown function | -1 | 35105 | 35362 |
| AVJ49911.1 | MG925345_p10 | hypothetical protein | phrog_4111 | unknown function | unknown function | 1 | 6885 | 7292 |
| AVJ49950.1 | MG925345_p52 | hypothetical protein | phrog_2396 | unknown function | unknown function | -1 | 36567 | 37442 |
| AVJ49930.1 | MG925345_p32 | nuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23766 | 24059 |
| AVJ49938.1 | MG925345_p40 | hypothetical protein | phrog_4283 | unknown function | unknown function | -1 | 30818 | 31087 |
| AVJ49918.1 | MG925345_p20 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 15318 | 15506 |
| AVJ49907.1 | MG925345_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4718 | 5686 |
| AVJ49947.1 | MG925345_p49 | hypothetical protein | phrog_27572 | unknown function | unknown function | -1 | 35420 | 35596 |
| AVJ49916.1 | MG925345_p18 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 12123 | 12893 |
| AVJ49932.1 | MG925345_p34 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24876 | 25541 |
| AVJ49904.1 | MG925345_p3 | portal protein | phrog_4142 | portal protein | head and packaging | 1 | 2028 | 3368 |
| AVJ49909.1 | MG925345_p8 | hypothetical protein | phrog_6789 | unknown function | unknown function | 1 | 6029 | 6469 |
| AVJ49926.1 | MG925345_p28 | hypothetical protein | phrog_33351 | unknown function | unknown function | -1 | 20701 | 20895 |
| AVJ49913.1 | MG925345_p12 | hypothetical protein | phrog_4076 | unknown function | unknown function | 1 | 7633 | 7992 |
| AVJ49957.1 | MG925345_p14 | hypothetical protein | phrog_2491 | major tail protein | tail | 1 | 8232 | 8732 |
| AVJ49903.1 | MG925345_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 608 | 2026 |
| AVJ49923.1 | MG925345_p25 | membrane protein | phrog_4153 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19767 | 20156 |
| AVJ49924.1 | MG925345_p26 | holin | phrog_1299 | holin | lysis | 1 | 20156 | 20449 |
| AVJ49956.1 | MG925345_p15 | tail assembly chaperone | phrog_18843 | tail assembly chaperone | tail | 1 | 8762 | 9699 |
| AVJ49921.1 | MG925345_p23 | minor tail protein | phrog_3432 | minor tail protein | tail | 1 | 16593 | 18722 |
| AVJ49914.1 | MG925345_p13 | hypothetical protein | phrog_4058 | unknown function | unknown function | 1 | 7992 | 8219 |
| AVJ49936.1 | MG925345_p38 | hypothetical protein | phrog_4077 | unknown function | unknown function | -1 | 28836 | 29258 |
| AVJ49925.1 | MG925345_p27 | hypothetical protein | phrog_4288 | unknown function | unknown function | -1 | 20507 | 20689 |
| AVJ49912.1 | MG925345_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7289 | 7630 |
| AVJ49929.1 | MG925345_p31 | DNA recombinase | phrog_3123 | unknown function | unknown function | -1 | 22123 | 23757 |
| AVJ49948.1 | MG925345_p50 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 35593 | 36330 |
| AVJ49949.1 | MG925345_p51 | hypothetical protein | phrog_35638 | unknown function | unknown function | -1 | 36355 | 36540 |
| AVJ49954.1 | MG925345_p56 | hypothetical protein | phrog_4232 | unknown function | unknown function | 1 | 38918 | 39340 |
| AVJ49934.1 | MG925345_p36 | exonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25675 | 26712 |
| AVJ49952.1 | MG925345_p54 | hypothetical protein | phrog_4362 | unknown function | unknown function | -1 | 38037 | 38381 |
| AVJ49951.1 | MG925345_p53 | hypothetical protein | phrog_800 | terminase small subunit | head and packaging | -1 | 37435 | 38040 |
| AVJ49941.1 | MG925345_p43 | hypothetical protein | phrog_4086 | unknown function | unknown function | -1 | 32116 | 32928 |
| AVJ49937.1 | MG925345_p39 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 29332 | 30726 |
| AVJ49922.1 | MG925345_p24 | lysin A | phrog_7698 | endolysin | lysis | 1 | 18752 | 19747 |
| AVJ49935.1 | MG925345_p37 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 26816 | 28666 |