Genomic map of Mycobacterium phage Mendokysei (MG925349)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG925349
Definition
Mycobacterium phage Mendokysei, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bernalvirus; unclassified Bernalvirus.
DB of origin
NUCCORE
Length
43511
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
66.35
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ50272.1 MG925349_p56 hypothetical protein singleton unknown function unknown function -1 39048 39398
AVJ50277.1 MG925349_p61 hypothetical protein phrog_6439 unknown function unknown function 1 41601 41822
AVJ50263.1 MG925349_p47 hypothetical protein phrog_3599 unknown function unknown function 1 35526 36041
AVJ50271.1 MG925349_p55 hypothetical protein singleton unknown function unknown function 1 38666 38962
AVJ50228.1 MG925349_p10 hypothetical protein phrog_19486 head-tail connector protein connector 1 8670 8981
AVJ50258.1 MG925349_p42 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 32149 32979
AVJ50243.1 MG925349_p26 lysin A phrog_317 endolysin lysis 1 23388 24968
AVJ50261.1 MG925349_p45 hypothetical protein phrog_19644 DNA binding protein DNA, RNA and nucleotide metabolism 1 34470 34619
AVJ50220.1 MG925349_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 535 2514
AVJ50283.1 MG925349_p62 hypothetical protein singleton unknown function unknown function 1 41835 42029
AVJ50229.1 MG925349_p11 hypothetical protein phrog_5210 neck protein connector 1 8981 9349
AVJ50279.1 MG925349_p64 DNA methylase phrog_67 DNA methyltransferase other 1 42338 43075
AVJ50256.1 MG925349_p39 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 30983 31297
AVJ50270.1 MG925349_p54 hypothetical protein singleton unknown function unknown function 1 38287 38562
AVJ50267.1 MG925349_p51 hypothetical protein phrog_10831 unknown function unknown function 1 37276 37974
AVJ50231.1 MG925349_p13 major tail protein phrog_476 major tail protein tail 1 9859 10791
AVJ50269.1 MG925349_p53 hypothetical protein singleton unknown function unknown function 1 38132 38290
AVJ50257.1 MG925349_p40 membrane protein phrog_9420 unknown function unknown function 1 31294 31668
AVJ50240.1 MG925349_p23 hypothetical protein phrog_4137 unknown function unknown function 1 21536 21826
AVJ50224.1 MG925349_p6 hypothetical protein phrog_15003 head scaffolding protein head and packaging 1 6101 6853
AVJ50242.1 MG925349_p25 hypothetical protein phrog_240 head protein head and packaging 1 23038 23388
AVJ50225.1 MG925349_p7 major capsid protein phrog_1328 major head protein head and packaging 1 6870 7853
AVJ50281.1 MG925349_p15 tail assembly chaperone phrog_19026 tail assembly chaperone tail 1 10855 11457
AVJ50278.1 MG925349_p63 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42026 42310
AVJ50265.1 MG925349_p49 hypothetical protein phrog_21821 unknown function unknown function 1 36340 36597
AVJ50248.1 MG925349_p31 integrase phrog_1 integrase integration and excision 1 27397 28584
AVJ50282.1 MG925349_p41 hypothetical protein phrog_19059 membrane protein moron, auxiliary metabolic gene and host takeover 1 31661 32152
AVJ50259.1 MG925349_p43 hypothetical protein phrog_3657 unknown function unknown function 1 32976 34268
AVJ50244.1 MG925349_p27 holin phrog_526 holin lysis 1 24965 25378
AVJ50275.1 MG925349_p59 hypothetical protein phrog_5436 unknown function unknown function -1 40265 41092
AVJ50221.1 MG925349_p3 portal protein phrog_104 portal protein head and packaging 1 2531 4096
AVJ50236.1 MG925349_p19 minor tail protein phrog_3856 minor tail protein tail 1 18493 19467
AVJ50254.1 MG925349_p37 hypothetical protein phrog_12989 membrane protein moron, auxiliary metabolic gene and host takeover 1 30252 30545
AVJ50247.1 MG925349_p30 membrane protein phrog_19123 membrane protein moron, auxiliary metabolic gene and host takeover -1 26634 26852
AVJ50266.1 MG925349_p50 hypothetical protein phrog_1467 unknown function unknown function 1 36594 37283
AVJ50255.1 MG925349_p38 hypothetical protein phrog_549 unknown function unknown function 1 30582 30983
AVJ50230.1 MG925349_p12 hypothetical protein phrog_123 tail terminator connector 1 9351 9842
AVJ50234.1 MG925349_p17 minor tail protein phrog_106 minor tail protein tail 1 15828 16793
AVJ50251.1 MG925349_p34 helix-turn-helix DNA binding domain protein phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29535 29852
AVJ50264.1 MG925349_p48 hypothetical protein phrog_20101 unknown function unknown function 1 36038 36343
AVJ50273.1 MG925349_p57 hypothetical protein phrog_15432 unknown function unknown function -1 39395 39754
AVJ50262.1 MG925349_p46 HTH DNA binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 34624 35529
AVJ50223.1 MG925349_p5 hypothetical protein phrog_1757 unknown function unknown function 1 5852 6031
AVJ50250.1 MG925349_p33 immunity repressor phrog_5301 transcriptional repressor transcription regulation -1 28983 29309
AVJ50238.1 MG925349_p21 minor tail protein phrog_2683 minor tail protein tail 1 19919 21190
AVJ50274.1 MG925349_p58 hypothetical protein phrog_18332 unknown function unknown function -1 39765 40232
AVJ50222.1 MG925349_p4 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4077 5855
AVJ50280.1 MG925349_p65 hypothetical protein phrog_35844 unknown function unknown function 1 43227 43430
AVJ50233.1 MG925349_p16 tapemeasure protein phrog_3547 tail length tape measure protein tail 1 11901 15827
AVJ50227.1 MG925349_p9 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8237 8689
AVJ50232.1 MG925349_p14 tail assembly chaperone phrog_21634 tail assembly chaperone tail 1 10855 11897
AVJ50268.1 MG925349_p52 hypothetical protein singleton unknown function unknown function 1 37971 38135
AVJ50276.1 MG925349_p60 hypothetical protein phrog_21728 unknown function unknown function 1 41155 41421
AVJ50249.1 MG925349_p32 hypothetical protein singleton unknown function unknown function 1 28614 28733
AVJ50219.1 MG925349_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 90 485
AVJ50252.1 MG925349_p35 exisionase phrog_66 excisionase and transcriptional regulator integration and excision 1 29852 30055
AVJ50237.1 MG925349_p20 minor tail protein phrog_19553 minor tail protein tail 1 19467 19919
AVJ50235.1 MG925349_p18 minor tail protein phrog_110 minor tail protein tail 1 16790 18496
AVJ50239.1 MG925349_p22 hypothetical protein phrog_2235 minor tail protein tail 1 21205 21525
AVJ50241.1 MG925349_p24 hypothetical protein phrog_19249 minor tail protein tail 1 21833 23023
AVJ50253.1 MG925349_p36 hypothetical protein phrog_19582 unknown function unknown function 1 30052 30255
AVJ50246.1 MG925349_p29 transposase phrog_2342 unknown function unknown function -1 25922 26641
AVJ50226.1 MG925349_p8 hypothetical protein phrog_20826 head-tail connector protein connector 1 7885 8256
AVJ50260.1 MG925349_p44 hypothetical protein phrog_7969 unknown function unknown function 1 34285 34473
AVJ50245.1 MG925349_p28 hypothetical protein phrog_404 minor tail protein tail 1 25521 25865