| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG925349 |
Definition |
Mycobacterium phage Mendokysei, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bernalvirus; unclassified Bernalvirus. |
DB of origin |
NUCCORE |
Length |
43511 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
65 |
%GC |
66.35 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ50272.1 | MG925349_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39048 | 39398 |
| AVJ50277.1 | MG925349_p61 | hypothetical protein | phrog_6439 | unknown function | unknown function | 1 | 41601 | 41822 |
| AVJ50263.1 | MG925349_p47 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 35526 | 36041 |
| AVJ50271.1 | MG925349_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38666 | 38962 |
| AVJ50228.1 | MG925349_p10 | hypothetical protein | phrog_19486 | head-tail connector protein | connector | 1 | 8670 | 8981 |
| AVJ50258.1 | MG925349_p42 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 32149 | 32979 |
| AVJ50243.1 | MG925349_p26 | lysin A | phrog_317 | endolysin | lysis | 1 | 23388 | 24968 |
| AVJ50261.1 | MG925349_p45 | hypothetical protein | phrog_19644 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34470 | 34619 |
| AVJ50220.1 | MG925349_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 535 | 2514 |
| AVJ50283.1 | MG925349_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41835 | 42029 |
| AVJ50229.1 | MG925349_p11 | hypothetical protein | phrog_5210 | neck protein | connector | 1 | 8981 | 9349 |
| AVJ50279.1 | MG925349_p64 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 42338 | 43075 |
| AVJ50256.1 | MG925349_p39 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 30983 | 31297 |
| AVJ50270.1 | MG925349_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38287 | 38562 |
| AVJ50267.1 | MG925349_p51 | hypothetical protein | phrog_10831 | unknown function | unknown function | 1 | 37276 | 37974 |
| AVJ50231.1 | MG925349_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 9859 | 10791 |
| AVJ50269.1 | MG925349_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38132 | 38290 |
| AVJ50257.1 | MG925349_p40 | membrane protein | phrog_9420 | unknown function | unknown function | 1 | 31294 | 31668 |
| AVJ50240.1 | MG925349_p23 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 21536 | 21826 |
| AVJ50224.1 | MG925349_p6 | hypothetical protein | phrog_15003 | head scaffolding protein | head and packaging | 1 | 6101 | 6853 |
| AVJ50242.1 | MG925349_p25 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23038 | 23388 |
| AVJ50225.1 | MG925349_p7 | major capsid protein | phrog_1328 | major head protein | head and packaging | 1 | 6870 | 7853 |
| AVJ50281.1 | MG925349_p15 | tail assembly chaperone | phrog_19026 | tail assembly chaperone | tail | 1 | 10855 | 11457 |
| AVJ50278.1 | MG925349_p63 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42026 | 42310 |
| AVJ50265.1 | MG925349_p49 | hypothetical protein | phrog_21821 | unknown function | unknown function | 1 | 36340 | 36597 |
| AVJ50248.1 | MG925349_p31 | integrase | phrog_1 | integrase | integration and excision | 1 | 27397 | 28584 |
| AVJ50282.1 | MG925349_p41 | hypothetical protein | phrog_19059 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 31661 | 32152 |
| AVJ50259.1 | MG925349_p43 | hypothetical protein | phrog_3657 | unknown function | unknown function | 1 | 32976 | 34268 |
| AVJ50244.1 | MG925349_p27 | holin | phrog_526 | holin | lysis | 1 | 24965 | 25378 |
| AVJ50275.1 | MG925349_p59 | hypothetical protein | phrog_5436 | unknown function | unknown function | -1 | 40265 | 41092 |
| AVJ50221.1 | MG925349_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2531 | 4096 |
| AVJ50236.1 | MG925349_p19 | minor tail protein | phrog_3856 | minor tail protein | tail | 1 | 18493 | 19467 |
| AVJ50254.1 | MG925349_p37 | hypothetical protein | phrog_12989 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 30252 | 30545 |
| AVJ50247.1 | MG925349_p30 | membrane protein | phrog_19123 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 26634 | 26852 |
| AVJ50266.1 | MG925349_p50 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 36594 | 37283 |
| AVJ50255.1 | MG925349_p38 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 30582 | 30983 |
| AVJ50230.1 | MG925349_p12 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9351 | 9842 |
| AVJ50234.1 | MG925349_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15828 | 16793 |
| AVJ50251.1 | MG925349_p34 | helix-turn-helix DNA binding domain protein | phrog_3642 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29535 | 29852 |
| AVJ50264.1 | MG925349_p48 | hypothetical protein | phrog_20101 | unknown function | unknown function | 1 | 36038 | 36343 |
| AVJ50273.1 | MG925349_p57 | hypothetical protein | phrog_15432 | unknown function | unknown function | -1 | 39395 | 39754 |
| AVJ50262.1 | MG925349_p46 | HTH DNA binding protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 34624 | 35529 |
| AVJ50223.1 | MG925349_p5 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 5852 | 6031 |
| AVJ50250.1 | MG925349_p33 | immunity repressor | phrog_5301 | transcriptional repressor | transcription regulation | -1 | 28983 | 29309 |
| AVJ50238.1 | MG925349_p21 | minor tail protein | phrog_2683 | minor tail protein | tail | 1 | 19919 | 21190 |
| AVJ50274.1 | MG925349_p58 | hypothetical protein | phrog_18332 | unknown function | unknown function | -1 | 39765 | 40232 |
| AVJ50222.1 | MG925349_p4 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4077 | 5855 |
| AVJ50280.1 | MG925349_p65 | hypothetical protein | phrog_35844 | unknown function | unknown function | 1 | 43227 | 43430 |
| AVJ50233.1 | MG925349_p16 | tapemeasure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 11901 | 15827 |
| AVJ50227.1 | MG925349_p9 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8237 | 8689 |
| AVJ50232.1 | MG925349_p14 | tail assembly chaperone | phrog_21634 | tail assembly chaperone | tail | 1 | 10855 | 11897 |
| AVJ50268.1 | MG925349_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37971 | 38135 |
| AVJ50276.1 | MG925349_p60 | hypothetical protein | phrog_21728 | unknown function | unknown function | 1 | 41155 | 41421 |
| AVJ50249.1 | MG925349_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28614 | 28733 |
| AVJ50219.1 | MG925349_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 90 | 485 |
| AVJ50252.1 | MG925349_p35 | exisionase | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 29852 | 30055 |
| AVJ50237.1 | MG925349_p20 | minor tail protein | phrog_19553 | minor tail protein | tail | 1 | 19467 | 19919 |
| AVJ50235.1 | MG925349_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16790 | 18496 |
| AVJ50239.1 | MG925349_p22 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 21205 | 21525 |
| AVJ50241.1 | MG925349_p24 | hypothetical protein | phrog_19249 | minor tail protein | tail | 1 | 21833 | 23023 |
| AVJ50253.1 | MG925349_p36 | hypothetical protein | phrog_19582 | unknown function | unknown function | 1 | 30052 | 30255 |
| AVJ50246.1 | MG925349_p29 | transposase | phrog_2342 | unknown function | unknown function | -1 | 25922 | 26641 |
| AVJ50226.1 | MG925349_p8 | hypothetical protein | phrog_20826 | head-tail connector protein | connector | 1 | 7885 | 8256 |
| AVJ50260.1 | MG925349_p44 | hypothetical protein | phrog_7969 | unknown function | unknown function | 1 | 34285 | 34473 |
| AVJ50245.1 | MG925349_p28 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25521 | 25865 |