| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG944216 |
Definition |
Microbacterium phage Pajaza, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pikminvirus; unclassified Pikminvirus. |
DB of origin |
NUCCORE |
Length |
39307 |
Host Name |
Microbacterium foliorum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
61.24 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVJ51045.1 | MG944216_p54 | hypothetical protein | phrog_3939 | unknown function | unknown function | -1 | 36284 | 36538 |
| AVJ51017.1 | MG944216_p26 | hypothetical protein | phrog_7870 | unknown function | unknown function | 1 | 20263 | 20694 |
| AVJ51037.1 | MG944216_p46 | hypothetical protein | phrog_31121 | unknown function | unknown function | -1 | 33659 | 33928 |
| AVJ51033.1 | MG944216_p42 | hypothetical protein | phrog_17374 | unknown function | unknown function | -1 | 31265 | 31420 |
| AVJ51007.1 | MG944216_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9601 | 11994 |
| AVJ51031.1 | MG944216_p40 | hypothetical protein | phrog_19027 | unknown function | unknown function | -1 | 30293 | 30517 |
| AVJ51011.1 | MG944216_p20 | hypothetical protein | phrog_4065 | unknown function | unknown function | 1 | 15387 | 15983 |
| AVJ51004.1 | MG944216_p13 | major tail protein | phrog_2491 | major tail protein | tail | 1 | 8136 | 8636 |
| AVJ51025.1 | MG944216_p34 | exonuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 24758 | 25918 |
| AVJ51032.1 | MG944216_p41 | nucleotide pyrophosphohydrolase | phrog_4159 | nucleotide pyrophosphohydrolase | other | -1 | 30519 | 31268 |
| AVJ51013.1 | MG944216_p22 | minor tail protein | phrog_3432 | minor tail protein | tail | 1 | 16468 | 18603 |
| AVJ50994.1 | MG944216_p3 | portal protein | phrog_4142 | portal protein | head and packaging | 1 | 2005 | 3315 |
| AVJ50996.1 | MG944216_p5 | scaffolding protein | phrog_4080 | scaffolding protein | head and packaging | 1 | 4561 | 5100 |
| AVJ51021.1 | MG944216_p30 | DNA recombinase | phrog_3123 | unknown function | unknown function | -1 | 21395 | 23059 |
| AVJ51035.1 | MG944216_p44 | thymidylate kinase | phrog_4121 | thymidylate kinase | other | -1 | 32198 | 32779 |
| AVJ51048.1 | MG944216_p57 | hypothetical protein | phrog_10754 | unknown function | unknown function | 1 | 38323 | 38544 |
| AVJ51038.1 | MG944216_p47 | hypothetical protein | phrog_19208 | unknown function | unknown function | -1 | 33921 | 34295 |
| AVJ51020.1 | MG944216_p29 | hypothetical protein | phrog_31008 | unknown function | unknown function | -1 | 21157 | 21402 |
| AVJ51043.1 | MG944216_p52 | hypothetical protein | phrog_4304 | unknown function | unknown function | -1 | 35754 | 35942 |
| AVJ51039.1 | MG944216_p48 | hypothetical protein | phrog_4198 | unknown function | unknown function | -1 | 34303 | 34605 |
| AVJ51022.1 | MG944216_p31 | nuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23032 | 23331 |
| AVJ50998.1 | MG944216_p7 | hypothetical protein | phrog_28045 | unknown function | unknown function | 1 | 6078 | 6341 |
| AVJ51029.1 | MG944216_p38 | hypothetical protein | phrog_4283 | unknown function | unknown function | -1 | 29766 | 30035 |
| AVJ51006.1 | MG944216_p14 | tail assembly chaperone | phrog_18843 | tail assembly chaperone | tail | 1 | 8660 | 9582 |
| AVJ51001.1 | MG944216_p10 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7200 | 7547 |
| AVJ50992.1 | MG944216_p1 | hypothetical protein | phrog_3678 | unknown function | unknown function | 1 | 1 | 627 |
| AVJ51026.1 | MG944216_p35 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 25905 | 27722 |
| AVJ51010.1 | MG944216_p19 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 15198 | 15386 |
| AVJ51041.1 | MG944216_p50 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 34721 | 35530 |
| AVJ51049.1 | MG944216_p58 | hypothetical protein | phrog_14499 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 38627 | 38773 |
| AVJ51034.1 | MG944216_p43 | hypothetical protein | phrog_4086 | unknown function | unknown function | -1 | 31417 | 32217 |
| AVJ50999.1 | MG944216_p8 | hypothetical protein | phrog_4055 | unknown function | unknown function | 1 | 6408 | 6821 |
| AVJ51024.1 | MG944216_p33 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24096 | 24761 |
| AVJ51008.1 | MG944216_p17 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 11991 | 12770 |
| AVJ51019.1 | MG944216_p28 | hypothetical protein | phrog_32476 | unknown function | unknown function | -1 | 20954 | 21118 |
| AVJ51016.1 | MG944216_p25 | holin | phrog_1299 | holin | lysis | 1 | 19954 | 20253 |
| AVJ51003.1 | MG944216_p12 | hypothetical protein | phrog_4058 | unknown function | unknown function | 1 | 7906 | 8121 |
| AVJ51047.1 | MG944216_p56 | hypothetical protein | phrog_25608 | unknown function | unknown function | -1 | 37507 | 37971 |
| AVJ51015.1 | MG944216_p24 | membrane protein | phrog_4153 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19595 | 19954 |
| AVJ51005.1 | MG944216_p15 | tail assembly chaperone | phrog_4129 | tail assembly chaperone | tail | 1 | 8660 | 9190 |
| AVJ51023.1 | MG944216_p32 | hypothetical protein | phrog_3724 | unknown function | unknown function | -1 | 23335 | 24108 |
| AVJ51018.1 | MG944216_p27 | hypothetical protein | phrog_35831 | unknown function | unknown function | -1 | 20759 | 20950 |
| AVJ51036.1 | MG944216_p45 | hypothetical protein | phrog_28776 | unknown function | unknown function | -1 | 32779 | 33666 |
| AVJ51042.1 | MG944216_p51 | hypothetical protein | phrog_15923 | unknown function | unknown function | -1 | 35611 | 35757 |
| AVJ51012.1 | MG944216_p21 | hypothetical protein | phrog_4108 | unknown function | unknown function | 1 | 15986 | 16468 |
| AVJ51050.1 | MG944216_p59 | hypothetical protein | phrog_4232 | unknown function | unknown function | 1 | 38795 | 39223 |
| AVJ51044.1 | MG944216_p53 | hypothetical protein | phrog_4158 | unknown function | unknown function | -1 | 35939 | 36229 |
| AVJ50993.1 | MG944216_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 620 | 2008 |
| AVJ51000.1 | MG944216_p9 | hypothetical protein | phrog_4111 | unknown function | unknown function | 1 | 6793 | 7200 |
| AVJ50997.1 | MG944216_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5146 | 6075 |
| AVJ51014.1 | MG944216_p23 | lysin A | phrog_291 | endolysin | lysis | 1 | 18626 | 19585 |
| AVJ51030.1 | MG944216_p39 | hypothetical protein | phrog_36304 | unknown function | unknown function | -1 | 30045 | 30320 |
| AVJ51002.1 | MG944216_p11 | hypothetical protein | phrog_4076 | unknown function | unknown function | 1 | 7550 | 7906 |
| AVJ51009.1 | MG944216_p18 | minor tail protein | phrog_3475 | minor tail protein | tail | 1 | 12770 | 15196 |
| AVJ51028.1 | MG944216_p37 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 28396 | 29766 |
| AVJ51040.1 | MG944216_p49 | hypothetical protein | phrog_36504 | unknown function | unknown function | -1 | 34602 | 34724 |
| AVJ51046.1 | MG944216_p55 | hypothetical protein | phrog_2396 | unknown function | unknown function | -1 | 36632 | 37510 |
| AVJ50995.1 | MG944216_p4 | capsid maturation protease | phrog_595 | head maturation protease | head and packaging | 1 | 3322 | 4506 |
| AVJ51027.1 | MG944216_p36 | hypothetical protein | phrog_4077 | unknown function | unknown function | -1 | 27901 | 28302 |