Genomic map of Microbacterium phage Pikmin (MG944218)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG944218
Definition
Microbacterium phage Pikmin, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pikminvirus; Microbacterium virus Pikmin.
DB of origin
NUCCORE
Length
39307
Host Name
Microbacterium foliorum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
61.26
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ51181.1 MG944218_p43 hypothetical protein phrog_4086 unknown function unknown function -1 31417 32217
AVJ51156.1 MG944218_p18 minor tail protein phrog_3475 minor tail protein tail 1 12770 15196
AVJ51197.1 MG944218_p59 hypothetical protein phrog_4232 unknown function unknown function 1 38795 39223
AVJ51163.1 MG944218_p25 holin phrog_1299 holin lysis 1 19954 20253
AVJ51143.1 MG944218_p5 scaffolding protein phrog_4080 scaffolding protein head and packaging 1 4561 5100
AVJ51146.1 MG944218_p8 hypothetical protein phrog_4055 unknown function unknown function 1 6408 6821
AVJ51195.1 MG944218_p57 hypothetical protein phrog_10754 unknown function unknown function 1 38323 38544
AVJ51184.1 MG944218_p46 hypothetical protein phrog_31121 unknown function unknown function -1 33659 33928
AVJ51182.1 MG944218_p44 thymidylate kinase phrog_4121 thymidylate kinase other -1 32198 32779
AVJ51193.1 MG944218_p55 hypothetical protein phrog_2396 unknown function unknown function -1 36632 37510
AVJ51185.1 MG944218_p47 hypothetical protein phrog_19208 unknown function unknown function -1 33921 34445
AVJ51147.1 MG944218_p9 hypothetical protein phrog_4111 unknown function unknown function 1 6793 7200
AVJ51179.1 MG944218_p41 nucleotide pyrophosphohydrolase phrog_4159 nucleotide pyrophosphohydrolase other -1 30519 31268
AVJ51183.1 MG944218_p45 hypothetical protein phrog_28776 unknown function unknown function -1 32779 33666
AVJ51168.1 MG944218_p30 DNA recombinase phrog_3123 unknown function unknown function -1 21395 23059
AVJ51167.1 MG944218_p29 hypothetical protein phrog_31008 unknown function unknown function -1 21157 21402
AVJ51188.1 MG944218_p50 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 34721 35530
AVJ51173.1 MG944218_p35 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 25905 27722
AVJ51171.1 MG944218_p33 AAA-ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24096 24761
AVJ51142.1 MG944218_p4 capsid morphogenesis protein phrog_595 head maturation protease head and packaging 1 3322 4506
AVJ51177.1 MG944218_p39 hypothetical protein phrog_36304 unknown function unknown function -1 30045 30320
AVJ51151.1 MG944218_p13 major tail protein phrog_2491 major tail protein tail 1 8136 8636
AVJ51186.1 MG944218_p48 hypothetical protein phrog_4198 unknown function unknown function -1 34303 34605
AVJ51153.1 MG944218_p14 tail assembly chaperone phrog_18843 tail assembly chaperone tail 1 8660 9582
AVJ51158.1 MG944218_p20 hypothetical protein phrog_4065 unknown function unknown function 1 15387 15983
AVJ51170.1 MG944218_p32 hypothetical protein phrog_3724 unknown function unknown function -1 23335 24108
AVJ51187.1 MG944218_p49 hypothetical protein phrog_36504 unknown function unknown function -1 34602 34724
AVJ51194.1 MG944218_p56 hypothetical protein phrog_25608 unknown function unknown function -1 37507 37971
AVJ51175.1 MG944218_p37 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 28396 29766
AVJ51166.1 MG944218_p28 hypothetical protein phrog_32476 unknown function unknown function -1 20954 21118
AVJ51162.1 MG944218_p24 membrane protein phrog_4153 membrane protein moron, auxiliary metabolic gene and host takeover 1 19595 19954
AVJ51159.1 MG944218_p21 hypothetical protein phrog_4108 unknown function unknown function 1 15986 16468
AVJ51145.1 MG944218_p7 hypothetical protein phrog_28045 unknown function unknown function 1 6078 6341
AVJ51172.1 MG944218_p34 exonuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 24758 25918
AVJ51155.1 MG944218_p17 minor tail protein phrog_33 distal tail protein Dit tail 1 11991 12770
AVJ51140.1 MG944218_p2 terminase phrog_38 terminase large subunit head and packaging 1 620 2008
AVJ51169.1 MG944218_p31 nuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 23032 23331
AVJ51144.1 MG944218_p6 major capsid protein phrog_10 major head protein head and packaging 1 5146 6075
AVJ51191.1 MG944218_p53 hypothetical protein phrog_4158 unknown function unknown function -1 35939 36229
AVJ51192.1 MG944218_p54 hypothetical protein phrog_3939 unknown function unknown function -1 36284 36538
AVJ51160.1 MG944218_p22 minor tail protein phrog_3432 minor tail protein tail 1 16468 18603
AVJ51164.1 MG944218_p26 hypothetical protein phrog_7870 unknown function unknown function 1 20263 20694
AVJ51161.1 MG944218_p23 lysin A phrog_291 endolysin lysis 1 18626 19585
AVJ51157.1 MG944218_p19 hypothetical protein phrog_3473 unknown function unknown function 1 15198 15386
AVJ51190.1 MG944218_p52 hypothetical protein phrog_4304 unknown function unknown function -1 35754 35942
AVJ51150.1 MG944218_p12 hypothetical protein phrog_4058 unknown function unknown function 1 7906 8121
AVJ51141.1 MG944218_p3 portal protein phrog_4142 portal protein head and packaging 1 2005 3315
AVJ51189.1 MG944218_p51 hypothetical protein phrog_15923 unknown function unknown function -1 35611 35757
AVJ51180.1 MG944218_p42 hypothetical protein phrog_17374 unknown function unknown function -1 31265 31420
AVJ51139.1 MG944218_p1 hypothetical protein phrog_3678 unknown function unknown function 1 1 627
AVJ51196.1 MG944218_p58 hypothetical protein phrog_14499 membrane protein moron, auxiliary metabolic gene and host takeover 1 38627 38773
AVJ51165.1 MG944218_p27 hypothetical protein phrog_35831 unknown function unknown function -1 20759 20950
AVJ51154.1 MG944218_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 9601 11994
AVJ51152.1 MG944218_p15 tail assembly chaperone phrog_4129 tail assembly chaperone tail 1 8660 9190
AVJ51178.1 MG944218_p40 hypothetical protein phrog_19027 unknown function unknown function -1 30293 30517
AVJ51174.1 MG944218_p36 hypothetical protein phrog_4077 unknown function unknown function -1 27901 28302
AVJ51176.1 MG944218_p38 hypothetical protein phrog_4283 unknown function unknown function -1 29766 30035
AVJ51149.1 MG944218_p11 hypothetical protein phrog_4076 unknown function unknown function 1 7550 7906
AVJ51148.1 MG944218_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7200 7547