Genomic map of Mycobacterium phage Ruotula (MG944220)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG944220
Definition
Mycobacterium phage Ruotula, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52601
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.44
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ51310.1 MG944220_p51 hypothetical protein phrog_499 unknown function unknown function -1 37123 37305
AVJ51313.1 MG944220_p54 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 38231 38998
AVJ51263.1 MG944220_p3 hypothetical protein phrog_226 minor tail protein tail 1 1660 2100
AVJ51295.1 MG944220_p36 hypothetical protein phrog_411 unknown function unknown function 1 29698 29994
AVJ51269.1 MG944220_p9 lysin B phrog_102 endolysin lysis 1 6208 7176
AVJ51274.1 MG944220_p14 major capsid protein phrog_10 major head protein head and packaging 1 11843 12847
AVJ51350.1 MG944220_p92 DNA methylase phrog_363 DNA methyltransferase other -1 51100 51789
AVJ51331.1 MG944220_p73 helix-turn-helix DNA binding protein phrog_2184 unknown function unknown function -1 45130 45450
AVJ51330.1 MG944220_p72 helix-turn-helix DNA binding protein phrog_520 unknown function unknown function -1 44840 45133
AVJ51344.1 MG944220_p86 hypothetical protein phrog_1155 unknown function unknown function -1 49696 49884
AVJ51328.1 MG944220_p70 hypothetical protein phrog_2507 unknown function unknown function -1 44545 44718
AVJ51268.1 MG944220_p8 lysin A phrog_317 endolysin lysis 1 4785 6218
AVJ51299.1 MG944220_p40 hypothetical protein singleton unknown function unknown function -1 32252 32449
AVJ51290.1 MG944220_p31 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26555 27592
AVJ51347.1 MG944220_p89 hypothetical protein phrog_9318 unknown function unknown function -1 50170 50340
AVJ51318.1 MG944220_p60 hypothetical protein singleton unknown function unknown function -1 41761 41904
AVJ51301.1 MG944220_p42 hypothetical protein phrog_2035 unknown function unknown function -1 32832 33002
AVJ51341.1 MG944220_p83 hypothetical protein phrog_6510 unknown function unknown function -1 49198 49380
AVJ51306.1 MG944220_p47 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 34078 34572
AVJ51284.1 MG944220_p25 minor tail protein phrog_1543 minor tail protein tail 1 21528 21710
AVJ51311.1 MG944220_p52 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 37302 38093
AVJ51293.1 MG944220_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28457 28648
AVJ51352.1 MG944220_p94 hypothetical protein phrog_828 unknown function unknown function -1 52015 52218
AVJ51289.1 MG944220_p30 minor tail protein phrog_346 minor tail protein tail 1 24709 26562
AVJ51354.1 MG944220_p58 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 41202 41618
AVJ51338.1 MG944220_p80 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 48366 48665
AVJ51270.1 MG944220_p10 terminase phrog_9 terminase large subunit head and packaging 1 7196 8884
AVJ51288.1 MG944220_p29 minor tail protein phrog_1397 unknown function unknown function 1 24337 24684
AVJ51325.1 MG944220_p67 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 43348 44169
AVJ51303.1 MG944220_p44 hypothetical protein phrog_1971 unknown function unknown function -1 33091 33384
AVJ51282.1 MG944220_p23 tape measure protein phrog_305 tail length tape measure protein tail 1 16616 19450
AVJ51308.1 MG944220_p49 hypothetical protein phrog_1781 unknown function unknown function -1 36374 36604
AVJ51327.1 MG944220_p69 hypothetical protein phrog_2864 unknown function unknown function -1 44378 44545
AVJ51337.1 MG944220_p79 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 47592 48104
AVJ51296.1 MG944220_p37 integrase phrog_95 integrase integration and excision 1 30065 31648
AVJ51285.1 MG944220_p26 minor tail protein phrog_110 minor tail protein tail 1 21710 23512
AVJ51264.1 MG944220_p4 hypothetical protein phrog_1197 tail protein tail 1 2465 3535
AVJ51277.1 MG944220_p17 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 13610 13972
AVJ51276.1 MG944220_p16 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 13164 13610
AVJ51353.1 MG944220_p22 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15800 16186
AVJ51335.1 MG944220_p77 hypothetical protein phrog_1584 unknown function unknown function -1 46835 47158
AVJ51297.1 MG944220_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31771 32043
AVJ51279.1 MG944220_p19 head-to-tail connector complex protein phrog_123 tail terminator connector 1 14371 14817
AVJ51315.1 MG944220_p56 hypothetical protein phrog_1167 phosphofructokinase other -1 39174 39803
AVJ51287.1 MG944220_p28 minor tail protein phrog_981 minor tail protein tail 1 24008 24340
AVJ51272.1 MG944220_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10320 11261
AVJ51291.1 MG944220_p32 minor tail protein phrog_16290 minor tail protein tail 1 27615 28034
AVJ51305.1 MG944220_p46 hypothetical protein phrog_3771 unknown function unknown function -1 33743 34057
AVJ51281.1 MG944220_p21 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15800 16602
AVJ51319.1 MG944220_p61 hypothetical protein phrog_397 unknown function unknown function -1 41901 42152
AVJ51294.1 MG944220_p35 hypothetical protein phrog_754 minor tail protein tail 1 28645 29577
AVJ51275.1 MG944220_p15 hypothetical protein phrog_1857 head-tail connector protein connector 1 12928 13164
AVJ51340.1 MG944220_p82 hypothetical protein phrog_1720 unknown function unknown function -1 48932 49201
AVJ51271.1 MG944220_p11 portal protein phrog_104 portal protein head and packaging 1 8881 10323
AVJ51323.1 MG944220_p65 hypothetical protein phrog_4371 unknown function unknown function -1 42952 43242
AVJ51320.1 MG944220_p62 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 42149 42625
AVJ51261.1 MG944220_p1 HNH endonuclease phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 698 1348
AVJ51280.1 MG944220_p20 major tail protein phrog_117 major tail protein tail 1 14826 15677
AVJ51324.1 MG944220_p66 hypothetical protein phrog_5742 unknown function unknown function -1 43249 43347
AVJ51336.1 MG944220_p78 hypothetical protein phrog_1809 unknown function unknown function -1 47155 47550
AVJ51300.1 MG944220_p41 hypothetical protein phrog_2387 nucleotide kinase other -1 32446 32835
AVJ51267.1 MG944220_p7 hypothetical protein phrog_747 unknown function unknown function 1 4528 4785
AVJ51266.1 MG944220_p6 hypothetical protein phrog_1718 tail protein tail 1 4260 4520
AVJ51329.1 MG944220_p71 hypothetical protein phrog_1705 unknown function unknown function -1 44715 44843
AVJ51312.1 MG944220_p53 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 38086 38226
AVJ51342.1 MG944220_p84 hypothetical protein phrog_1387 unknown function unknown function -1 49377 49577
AVJ51314.1 MG944220_p55 hypothetical protein phrog_1503 unknown function unknown function -1 38995 39177
AVJ51298.1 MG944220_p39 hypothetical protein phrog_23413 restriction enzyme I DNA, RNA and nucleotide metabolism -1 32040 32255
AVJ51322.1 MG944220_p64 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42695 42952
AVJ51317.1 MG944220_p59 hypothetical protein phrog_1783 unknown function unknown function -1 41597 41761
AVJ51273.1 MG944220_p13 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11321 11833
AVJ51309.1 MG944220_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 36635 37126
AVJ51351.1 MG944220_p93 hypothetical protein phrog_2212 unknown function unknown function -1 51803 51901
AVJ51283.1 MG944220_p24 minor tail protein phrog_106 minor tail protein tail 1 19474 21531
AVJ51262.1 MG944220_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1335 1625
AVJ51334.1 MG944220_p76 hypothetical protein phrog_13709 unknown function unknown function -1 46623 46838
AVJ51333.1 MG944220_p75 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 45796 46644
AVJ51345.1 MG944220_p87 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 49884 50051
AVJ51304.1 MG944220_p45 hypothetical protein phrog_383 unknown function unknown function -1 33381 33743
AVJ51307.1 MG944220_p48 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 34550 36337
AVJ51332.1 MG944220_p74 helix-turn-helix DNA binding protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 45454 45636
AVJ51346.1 MG944220_p88 hypothetical protein phrog_2093 unknown function unknown function -1 50048 50173
AVJ51286.1 MG944220_p27 minor tail protein phrog_352 minor tail protein tail 1 23550 23996
AVJ51348.1 MG944220_p90 hypothetical protein phrog_932 unknown function unknown function -1 50359 50508
AVJ51292.1 MG944220_p33 hypothetical protein phrog_644 unknown function unknown function 1 28127 28447
AVJ51339.1 MG944220_p81 hypothetical protein phrog_26295 unknown function unknown function -1 48675 48935
AVJ51326.1 MG944220_p68 hypothetical protein phrog_5323 unknown function unknown function -1 44172 44381
AVJ51316.1 MG944220_p57 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39800 41344
AVJ51321.1 MG944220_p63 hypothetical protein phrog_1019 unknown function unknown function -1 42612 42698
AVJ51302.1 MG944220_p43 hypothetical protein phrog_1860 unknown function unknown function -1 32999 33085
AVJ51343.1 MG944220_p85 hypothetical protein phrog_1155 unknown function unknown function -1 49574 49699
AVJ51265.1 MG944220_p5 hypothetical protein phrog_553 minor tail protein tail 1 3545 4246
AVJ51278.1 MG944220_p18 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13972 14367
AVJ51349.1 MG944220_p91 hypothetical protein phrog_4631 unknown function unknown function -1 50505 50822