Genomic map of Mycobacterium phage Scowl (MG944221)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG944221
Definition
Mycobacterium phage Scowl, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
51690
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
63.78
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVJ51428.1 MG944221_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46146 46658
AVJ51444.1 MG944221_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16056 16427
AVJ51371.1 MG944221_p17 hypothetical protein phrog_1857 head-tail connector protein connector 1 13194 13430
AVJ51445.1 MG944221_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39010 39552
AVJ51386.1 MG944221_p33 hypothetical protein phrog_644 unknown function unknown function 1 28011 28331
AVJ51412.1 MG944221_p60 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39919 40383
AVJ51382.1 MG944221_p29 minor tail protein phrog_352 minor tail protein tail 1 23643 24089
AVJ51436.1 MG944221_p84 hypothetical protein phrog_8429 NifU-like Fe-S cluster assembly protein moron, auxiliary metabolic gene and host takeover -1 48600 49022
AVJ51376.1 MG944221_p22 major tail protein phrog_117 major tail protein tail 1 15095 15943
AVJ51419.1 MG944221_p67 hypothetical protein phrog_520 unknown function unknown function -1 42206 42499
AVJ51364.1 MG944221_p10 lysin A phrog_317 endolysin lysis 1 5114 6547
AVJ51396.1 MG944221_p43 hypothetical protein phrog_9812 unknown function unknown function -1 32731 32982
AVJ51368.1 MG944221_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10649 11530
AVJ51399.1 MG944221_p46 hypothetical protein phrog_542 unknown function unknown function -1 35262 35390
AVJ51356.1 MG944221_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 986 1294
AVJ51411.1 MG944221_p59 hypothetical protein phrog_397 unknown function unknown function -1 39757 39900
AVJ51391.1 MG944221_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31551 31823
AVJ51416.1 MG944221_p64 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41096 41917
AVJ51355.1 MG944221_p1 hypothetical protein phrog_17889 endonuclease DNA, RNA and nucleotide metabolism 1 540 989
AVJ51433.1 MG944221_p81 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 47870 48037
AVJ51372.1 MG944221_p18 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 13430 13879
AVJ51373.1 MG944221_p19 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 13879 14241
AVJ51421.1 MG944221_p69 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42712 43515
AVJ51390.1 MG944221_p37 integrase phrog_95 integrase integration and excision 1 29862 31430
AVJ51417.1 MG944221_p65 hypothetical protein phrog_2507 unknown function unknown function -1 41917 42090
AVJ51395.1 MG944221_p42 hypothetical protein phrog_1971 unknown function unknown function -1 32462 32734
AVJ51401.1 MG944221_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35660 36163
AVJ51437.1 MG944221_p85 tRNA-methyltransferase phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 49019 49942
AVJ51442.1 MG944221_p90 hypothetical protein phrog_828 unknown function unknown function 1 50695 50898
AVJ51381.1 MG944221_p28 minor tail protein phrog_110 minor tail protein tail 1 21803 23605
AVJ51389.1 MG944221_p36 hypothetical protein phrog_411 unknown function unknown function 1 29483 29779
AVJ51441.1 MG944221_p89 hypothetical protein phrog_3574 unknown function unknown function 1 50462 50659
AVJ51418.1 MG944221_p66 hypothetical protein phrog_1705 unknown function unknown function -1 42087 42209
AVJ51429.1 MG944221_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46920 47219
AVJ51363.1 MG944221_p9 hypothetical protein phrog_747 unknown function unknown function 1 4857 5114
AVJ51408.1 MG944221_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38670 39191
AVJ51369.1 MG944221_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11589 12101
AVJ51415.1 MG944221_p63 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40830 41099
AVJ51424.1 MG944221_p72 hypothetical protein phrog_6068 unknown function unknown function -1 45020 45253
AVJ51406.1 MG944221_p53 hypothetical protein phrog_1503 unknown function unknown function -1 38027 38197
AVJ51438.1 MG944221_p86 hypothetical protein phrog_14752 unknown function unknown function -1 49939 50091
AVJ51362.1 MG944221_p8 hypothetical protein phrog_1718 tail protein tail 1 4589 4849
AVJ51398.1 MG944221_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33395 35221
AVJ51402.1 MG944221_p49 hypothetical protein phrog_499 unknown function unknown function -1 36160 36342
AVJ51388.1 MG944221_p35 hypothetical protein phrog_754 minor tail protein tail 1 28529 29362
AVJ51366.1 MG944221_p12 terminase phrog_9 terminase large subunit head and packaging 1 7525 9213
AVJ51426.1 MG944221_p74 hypothetical protein phrog_1584 unknown function unknown function -1 45395 45712
AVJ51385.1 MG944221_p32 minor tail protein phrog_346 minor tail protein tail 1 24802 27918
AVJ51361.1 MG944221_p7 hypothetical protein phrog_553 minor tail protein tail 1 3865 4575
AVJ51358.1 MG944221_p4 hypothetical protein phrog_226 minor tail protein tail 1 1451 1891
AVJ51380.1 MG944221_p27 minor tail protein phrog_1543 minor tail protein tail 1 21621 21803
AVJ51397.1 MG944221_p44 hypothetical protein phrog_383 unknown function unknown function -1 33018 33374
AVJ51377.1 MG944221_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16056 16849
AVJ51430.1 MG944221_p78 hypothetical protein phrog_1720 unknown function unknown function -1 47216 47485
AVJ51422.1 MG944221_p70 DNA binding domain protein phrog_4285 transposase integration and excision -1 43512 44222
AVJ51365.1 MG944221_p11 lysin B phrog_102 endolysin lysis 1 6537 7505
AVJ51413.1 MG944221_p61 hypothetical protein phrog_1019 unknown function unknown function -1 40370 40456
AVJ51392.1 MG944221_p39 hypothetical protein phrog_2387 nucleotide kinase other -1 31820 32206
AVJ51393.1 MG944221_p40 hypothetical protein phrog_2035 unknown function unknown function -1 32203 32373
AVJ51439.1 MG944221_p87 hypothetical protein phrog_2287 unknown function unknown function -1 50088 50300
AVJ51359.1 MG944221_p5 hypothetical protein phrog_20136 unknown function unknown function 1 2239 2490
AVJ51375.1 MG944221_p21 head-to-tail connector complex protein phrog_123 tail terminator connector 1 14640 15086
AVJ51435.1 MG944221_p83 hypothetical protein phrog_932 unknown function unknown function -1 48183 48332
AVJ51432.1 MG944221_p80 hypothetical protein phrog_1155 unknown function unknown function -1 47682 47870
AVJ51384.1 MG944221_p31 minor tail protein phrog_1397 unknown function unknown function 1 24430 24777
AVJ51443.1 MG944221_p91 hypothetical protein phrog_13308 unknown function unknown function -1 50948 51298
AVJ51400.1 MG944221_p47 hypothetical protein phrog_1781 unknown function unknown function -1 35387 35617
AVJ51410.1 MG944221_p58 hypothetical protein singleton unknown function unknown function -1 39695 39760
AVJ51357.1 MG944221_p3 hypothetical protein phrog_4152 unknown function unknown function 1 1291 1437
AVJ51409.1 MG944221_p57 hypothetical protein phrog_1783 unknown function unknown function -1 39531 39695
AVJ51427.1 MG944221_p75 hypothetical protein phrog_1809 unknown function unknown function -1 45709 46104
AVJ51394.1 MG944221_p41 hypothetical protein phrog_1860 unknown function unknown function -1 32370 32465
AVJ51367.1 MG944221_p13 portal protein phrog_104 portal protein head and packaging 1 9210 10652
AVJ51440.1 MG944221_p88 hypothetical protein phrog_2212 unknown function unknown function -1 50325 50444
AVJ51425.1 MG944221_p73 hypothetical protein phrog_5947 unknown function unknown function -1 45246 45398
AVJ51423.1 MG944221_p71 hypothetical protein phrog_4604 unknown function unknown function -1 44562 45023
AVJ51420.1 MG944221_p68 helix-turn-helix DNA binding protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42503 42685
AVJ51404.1 MG944221_p51 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37123 37257
AVJ51360.1 MG944221_p6 hypothetical protein phrog_1197 tail protein tail 1 2785 3855
AVJ51414.1 MG944221_p62 hypothetical protein phrog_1573 DNA methyltransferase other -1 40453 40833
AVJ51378.1 MG944221_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 16861 19521
AVJ51370.1 MG944221_p16 major capsid protein phrog_10 major head protein head and packaging 1 12111 13115
AVJ51431.1 MG944221_p79 hypothetical protein phrog_1387 unknown function unknown function -1 47482 47685
AVJ51379.1 MG944221_p26 minor tail protein phrog_106 minor tail protein tail 1 19545 21602
AVJ51434.1 MG944221_p82 hypothetical protein phrog_2093 unknown function unknown function -1 48034 48162
AVJ51383.1 MG944221_p30 minor tail protein phrog_981 minor tail protein tail 1 24086 24433
AVJ51387.1 MG944221_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28341 28532
AVJ51374.1 MG944221_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14241 14636
AVJ51407.1 MG944221_p54 hypothetical protein phrog_474 phosphofructokinase other -1 38194 38673
AVJ51405.1 MG944221_p52 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 37263 38030
AVJ51403.1 MG944221_p50 helix-turn-helix DNA binding protein phrog_354 sigma-K factor transcription regulation -1 36339 37130