Genomic map of Vibrio phage Rostov-1 (MG957431)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG957431
Definition
Vibrio phage Rostov-1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Chatterjeevirus; unclassified Chatterjeevirus.
DB of origin
NUCCORE
Length
37247
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
39
%GC
42.77
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVH85426.1 MG957431_p11 similar to hypothetical protein Vibrio phage ICP3 phrog_10099 unknown function unknown function -1 14423 14713
AVH85447.1 MG957431_p32 similar to hypothetical protein VchM-138_0036 Vibrio phage vB_VchM-138 phrog_28061 unknown function unknown function -1 31790 31963
AVH85421.1 MG957431_p6 similar to tail tubular protein B Vibrio phage ICP3 phrog_457 tail protein tail -1 7550 9934
AVH85452.1 MG957431_p37 similar to hypothetical protein Vibrio phage ICP3 phrog_4712 holin lysis -1 36100 36243
AVH85422.1 MG957431_p7 similar to tail tubular protein A Vibrio phage ICP3 phrog_446 tail protein tail -1 9946 10539
AVH85439.1 MG957431_p24 similar to DNA primase/helicase Vibrio phage N4 phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 23308 25029
AVH85442.1 MG957431_p27 similar to hypothetical protein VN4_08 Vibrio phage N4 phrog_11648 unknown function unknown function -1 26045 26197
AVH85453.1 MG957431_p38 similar to DNA packaging/maturation protein A Vibrio phage N4 phrog_1351 terminase small subunit head and packaging -1 36262 36444
AVH85425.1 MG957431_p10 similar to head-to-tail joining protein Vibrio phage ICP3 phrog_449 head-tail adaptor connector -1 12807 14405
AVH85444.1 MG957431_p29 similar to hypothetical protein VN4_06 Vibrio phage N4 phrog_139 deoxynucleoside monophosphate kinase other -1 26582 27334
AVH85417.1 MG957431_p2 similar to internal virion protein C Vibrio phage N4 phrog_1339 internal virion protein head and packaging -1 3497 5674
AVH85433.1 MG957431_p18 similar to 5.7 kDa protein Vibrio phage N4 phrog_1334 unknown function unknown function -1 18593 18757
AVH85429.1 MG957431_p14 similar to lysozyme Vibrio phage ICP3 phrog_822 amidase lysis -1 15841 16275
AVH85437.1 MG957431_p22 similar to hypothetical protein VN4_14 Vibrio phage N4 phrog_10620 unknown function unknown function -1 22383 22847
AVH85441.1 MG957431_p26 similar to hypothetical protein VN4_09 Vibrio phage N4 phrog_10197 unknown function unknown function -1 25725 26006
AVH85436.1 MG957431_p21 similar to DNA polymerase Vibrio phage N4 phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 19801 21552
AVH85448.1 MG957431_p33 similar to hypothetical protein Vibrio phage ICP3 phrog_11474 unknown function unknown function -1 32104 32277
AVH85451.1 MG957431_p36 similar to hypothetical protein Vibrio phage ICP3 phrog_10167 unknown function unknown function -1 35903 36100
AVH85423.1 MG957431_p8 similar to major capsid protein Vibrio phage N4 phrog_267 major head protein head and packaging -1 10605 11729
AVH85443.1 MG957431_p28 similar to host RNA polymerase inhibitory protein Vibrio phage ICP3 phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism -1 26367 26492
AVH85424.1 MG957431_p9 similar to capsid assembly protein Vibrio phage N4 phrog_1052 head assembly head and packaging -1 11849 12727
AVH85440.1 MG957431_p25 similar to hypothetical protein VN4_10 Vibrio phage N4 phrog_5138 unknown function unknown function -1 25314 25709
AVH85445.1 MG957431_p30 similar to DNA ligase Vibrio phage N4 phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 27899 28909
AVH85420.1 MG957431_p5 similar to deoxyribonucleoside kinase Vibrio phage N4 phrog_761 thymidylate kinase other -1 6830 7462
AVH85416.1 MG957431_p1 similar to internal virion protein D Vibrio phage N4 phrog_342 internal virion protein with endolysin domain head and packaging -1 101 3484
AVH85430.1 MG957431_p15 similar to endonuclease Vibrio phage N4 phrog_945 endonuclease DNA, RNA and nucleotide metabolism -1 16275 16727
AVH85438.1 MG957431_p23 similar to hypothetical protein VN4_13 Vibrio phage N4 phrog_10688 unknown function unknown function -1 22933 23202
AVH85427.1 MG957431_p12 similar to hypothetical protein Vibrio phage ICP3 phrog_1391 unknown function unknown function -1 15156 15416
AVH85449.1 MG957431_p34 similar to S-adenosyl-L-methionine hydrolase Vibrio phage ICP3 singleton unknown function unknown function -1 32432 32581
AVH85419.1 MG957431_p4 similar to internal virion protein A Vibrio phage N4 phrog_308 internal virion protein head and packaging -1 6319 6663
AVH85431.1 MG957431_p16 similar to ssDNA-binding protein Vibrio phage N4 phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 16727 17398
AVH85454.1 MG957431_p39 similar to hypothetical protein VN4_42 Vibrio phage N4 phrog_12315 unknown function unknown function -1 36507 36791
AVH85435.1 MG957431_p20 similar to hypothetical protein VN4_19 Vibrio phage N4 phrog_10513 unknown function unknown function -1 19104 19472
AVH85450.1 MG957431_p35 similar to DNA packaging protein B Vibriophage VP4 phrog_38 terminase large subunit head and packaging -1 34076 35836
AVH85446.1 MG957431_p31 similar to RNA polymerase Vibrio phage N4 phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 29092 31743
AVH85428.1 MG957431_p13 similar to 6.5 protein Vibrio phage ICP3 phrog_1447 unknown function unknown function -1 15423 15704
AVH85432.1 MG957431_p17 similar to exonuclease Vibrio phage N4 phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 17730 18593
AVH85434.1 MG957431_p19 similar to hypothetical protein Vibrio phage ICP3 phrog_14683 unknown function unknown function -1 18802 18972
AVH85418.1 MG957431_p3 similar to internal virion protein B Vibrio phage N4 phrog_805 internal virion protein head and packaging -1 5742 6326