| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG962364 |
Definition |
Mycobacterium phage Deby, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
60463 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
66.49 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO24774.1 | MG962364_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10475 | 11089 |
| AVO24795.1 | MG962364_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 32066 | 32368 |
| AVO24775.1 | MG962364_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11203 | 11640 |
| AVO24776.1 | MG962364_p20 | tapemeasure protein | phrog_971 | endolysin | lysis | 1 | 12050 | 15883 |
| AVO24787.1 | MG962364_p31 | holin | phrog_565 | holin | lysis | 1 | 27311 | 27751 |
| AVO24816.1 | MG962364_p62 | hypothetical protein | phrog_9435 | unknown function | unknown function | 1 | 42593 | 43081 |
| AVO24804.1 | MG962364_p50 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 37859 | 38731 |
| AVO24839.1 | MG962364_p85 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55645 | 56043 |
| AVO24783.1 | MG962364_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23290 | 24303 |
| AVO24843.1 | MG962364_p89 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 57522 | 58340 |
| AVO24842.1 | MG962364_p88 | helix-turn-helix DNA binding domain protein | phrog_3665 | unknown function | unknown function | 1 | 57192 | 57353 |
| AVO24782.1 | MG962364_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20846 | 23278 |
| AVO24845.1 | MG962364_p91 | HicA-like toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 58690 | 58905 |
| AVO24846.1 | MG962364_p92 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 59053 | 59322 |
| AVO24815.1 | MG962364_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42345 | 42539 |
| AVO24788.1 | MG962364_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27748 | 28092 |
| AVO24777.1 | MG962364_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15985 | 17121 |
| AVO24844.1 | MG962364_p90 | HicB-like antitoxin | phrog_5243 | unknown function | unknown function | 1 | 58372 | 58569 |
| AVO24819.1 | MG962364_p65 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43494 | 44003 |
| AVO24778.1 | MG962364_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17122 | 18888 |
| AVO24789.1 | MG962364_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28089 | 28340 |
| AVO24849.1 | MG962364_p95 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60102 | 60404 |
| AVO24790.1 | MG962364_p34 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28327 | 29535 |
| AVO24830.1 | MG962364_p76 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51408 | 51686 |
| AVO24791.1 | MG962364_p35 | helix-turn-helix DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29728 | 30159 |
| AVO24832.1 | MG962364_p78 | membrane protein | phrog_2342 | unknown function | unknown function | 1 | 51898 | 52800 |
| AVO24852.1 | MG962364_p41 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 33915 | 34754 |
| AVO24801.1 | MG962364_p47 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 36602 | 36814 |
| AVO24799.1 | MG962364_p45 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35909 | 36259 |
| AVO24763.1 | MG962364_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1364 | 1591 |
| AVO24772.1 | MG962364_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 9672 | 9953 |
| AVO24793.1 | MG962364_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30510 | 31199 |
| AVO24847.1 | MG962364_p93 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 59696 | 59926 |
| AVO24837.1 | MG962364_p83 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 54149 | 54346 |
| AVO24765.1 | MG962364_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3008 | 4561 |
| AVO24833.1 | MG962364_p79 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52797 | 53273 |
| AVO24786.1 | MG962364_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26428 | 27300 |
| AVO24771.1 | MG962364_p14 | head-to-tail connector complex protein | phrog_763 | head-tail adaptor | connector | 1 | 9335 | 9691 |
| AVO24792.1 | MG962364_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30156 | 30434 |
| AVO24807.1 | MG962364_p53 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39292 | 39672 |
| AVO24780.1 | MG962364_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19448 | 20530 |
| AVO24823.1 | MG962364_p69 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47787 | 48485 |
| AVO24802.1 | MG962364_p48 | helix-turn-helix DNA binding domain protein | phrog_2286 | unknown function | unknown function | 1 | 36811 | 37602 |
| AVO24811.1 | MG962364_p57 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40717 | 40983 |
| AVO24828.1 | MG962364_p74 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50485 | 50757 |
| AVO24779.1 | MG962364_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18888 | 19364 |
| AVO24805.1 | MG962364_p51 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38743 | 38913 |
| AVO24766.1 | MG962364_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4566 | 7073 |
| AVO24784.1 | MG962364_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24387 | 24758 |
| AVO24814.1 | MG962364_p60 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41461 | 42348 |
| AVO24761.1 | MG962364_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 727 | 945 |
| AVO24834.1 | MG962364_p80 | hypothetical protein | phrog_5794 | unknown function | unknown function | 1 | 53273 | 53638 |
| AVO24826.1 | MG962364_p72 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 49136 | 50242 |
| AVO24798.1 | MG962364_p44 | helix-turn-helix DNA binding domain protein | phrog_1840 | excisionase | integration and excision | 1 | 35641 | 35907 |
| AVO24760.1 | MG962364_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 476 | 730 |
| AVO24762.1 | MG962364_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1171 | 1371 |
| AVO24770.1 | MG962364_p13 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8994 | 9338 |
| AVO24817.1 | MG962364_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 43078 | 43293 |
| AVO24800.1 | MG962364_p46 | membrane protein | phrog_2654 | unknown function | unknown function | 1 | 36438 | 36605 |
| AVO24797.1 | MG962364_p42 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34845 | 35225 |
| AVO24794.1 | MG962364_p38 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 31314 | 32003 |
| AVO24851.1 | MG962364_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11203 | 12050 |
| AVO24806.1 | MG962364_p52 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38945 | 39295 |
| AVO24838.1 | MG962364_p84 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 54458 | 55645 |
| AVO24829.1 | MG962364_p75 | protease | phrog_1006 | unknown function | unknown function | 1 | 50830 | 51291 |
| AVO24831.1 | MG962364_p77 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51773 | 51901 |
| AVO24820.1 | MG962364_p66 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 44105 | 44347 |
| AVO24758.1 | MG962364_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 297 |
| AVO24827.1 | MG962364_p73 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50255 | 50488 |
| AVO24803.1 | MG962364_p49 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37599 | 37862 |
| AVO24813.1 | MG962364_p59 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41297 | 41464 |
| AVO24821.1 | MG962364_p67 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44347 | 44718 |
| AVO24848.1 | MG962364_p94 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59923 | 60105 |
| AVO24769.1 | MG962364_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7902 | 8840 |
| AVO24796.1 | MG962364_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32726 | 33811 |
| AVO24781.1 | MG962364_p25 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20537 | 20845 |
| AVO24810.1 | MG962364_p56 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40163 | 40717 |
| AVO24785.1 | MG962364_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24776 | 26431 |
| AVO24808.1 | MG962364_p54 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39673 | 39951 |
| AVO24840.1 | MG962364_p86 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 56043 | 56654 |
| AVO24818.1 | MG962364_p64 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43293 | 43412 |
| AVO24764.1 | MG962364_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1575 | 2996 |
| AVO24773.1 | MG962364_p16 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 9950 | 10375 |
| AVO24835.1 | MG962364_p81 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 53638 | 53940 |
| AVO24836.1 | MG962364_p82 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53940 | 54137 |
| AVO24850.1 | MG962364_p43 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35405 | 35644 |
| AVO24767.1 | MG962364_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7070 | 7255 |
| AVO24812.1 | MG962364_p58 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40980 | 41300 |
| AVO24825.1 | MG962364_p71 | hypothetical protein | phrog_6689 | unknown function | unknown function | 1 | 48936 | 49139 |
| AVO24759.1 | MG962364_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 294 | 479 |
| AVO24768.1 | MG962364_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7293 | 7826 |
| AVO24824.1 | MG962364_p70 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48478 | 48939 |
| AVO24841.1 | MG962364_p87 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56647 | 57195 |
| AVO24822.1 | MG962364_p68 | DNA primase/polymerase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44760 | 47378 |
| AVO24809.1 | MG962364_p55 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 39948 | 40151 |