Genomic map of Mycobacterium phage Deby (MG962364)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG962364
Definition
Mycobacterium phage Deby, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
60463
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
66.49
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO24774.1 MG962364_p17 major tail protein phrog_117 major tail protein tail 1 10475 11089
AVO24795.1 MG962364_p39 hypothetical protein phrog_658 unknown function unknown function -1 32066 32368
AVO24775.1 MG962364_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11203 11640
AVO24776.1 MG962364_p20 tapemeasure protein phrog_971 endolysin lysis 1 12050 15883
AVO24787.1 MG962364_p31 holin phrog_565 holin lysis 1 27311 27751
AVO24816.1 MG962364_p62 hypothetical protein phrog_9435 unknown function unknown function 1 42593 43081
AVO24804.1 MG962364_p50 hypothetical protein phrog_2781 unknown function unknown function 1 37859 38731
AVO24839.1 MG962364_p85 hypothetical protein phrog_3167 unknown function unknown function 1 55645 56043
AVO24783.1 MG962364_p27 minor tail protein phrog_416 minor tail protein tail 1 23290 24303
AVO24843.1 MG962364_p89 hypothetical protein phrog_5812 unknown function unknown function 1 57522 58340
AVO24842.1 MG962364_p88 helix-turn-helix DNA binding domain protein phrog_3665 unknown function unknown function 1 57192 57353
AVO24782.1 MG962364_p26 minor tail protein phrog_346 minor tail protein tail 1 20846 23278
AVO24845.1 MG962364_p91 HicA-like toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58690 58905
AVO24846.1 MG962364_p92 hypothetical protein phrog_4560 unknown function unknown function 1 59053 59322
AVO24815.1 MG962364_p61 hypothetical protein phrog_3492 unknown function unknown function 1 42345 42539
AVO24788.1 MG962364_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27748 28092
AVO24777.1 MG962364_p21 minor tail protein phrog_106 minor tail protein tail 1 15985 17121
AVO24844.1 MG962364_p90 HicB-like antitoxin phrog_5243 unknown function unknown function 1 58372 58569
AVO24819.1 MG962364_p65 hypothetical protein phrog_1911 unknown function unknown function 1 43494 44003
AVO24778.1 MG962364_p22 minor tail protein phrog_110 minor tail protein tail 1 17122 18888
AVO24789.1 MG962364_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28089 28340
AVO24849.1 MG962364_p95 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 60102 60404
AVO24790.1 MG962364_p34 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28327 29535
AVO24830.1 MG962364_p76 hypothetical protein phrog_2974 unknown function unknown function 1 51408 51686
AVO24791.1 MG962364_p35 helix-turn-helix DNA binding domain protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29728 30159
AVO24832.1 MG962364_p78 membrane protein phrog_2342 unknown function unknown function 1 51898 52800
AVO24852.1 MG962364_p41 membrane protein phrog_950 unknown function unknown function -1 33915 34754
AVO24801.1 MG962364_p47 hypothetical protein phrog_3903 unknown function unknown function 1 36602 36814
AVO24799.1 MG962364_p45 hypothetical protein phrog_2908 unknown function unknown function 1 35909 36259
AVO24763.1 MG962364_p6 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1364 1591
AVO24772.1 MG962364_p15 hypothetical protein phrog_387 neck protein connector 1 9672 9953
AVO24793.1 MG962364_p37 hypothetical protein phrog_2433 unknown function unknown function 1 30510 31199
AVO24847.1 MG962364_p93 hypothetical protein phrog_4561 unknown function unknown function 1 59696 59926
AVO24837.1 MG962364_p83 hypothetical protein phrog_6426 unknown function unknown function 1 54149 54346
AVO24765.1 MG962364_p8 portal protein phrog_104 portal protein head and packaging 1 3008 4561
AVO24833.1 MG962364_p79 hypothetical protein phrog_3868 unknown function unknown function 1 52797 53273
AVO24786.1 MG962364_p30 lysin B phrog_102 endolysin lysis 1 26428 27300
AVO24771.1 MG962364_p14 head-to-tail connector complex protein phrog_763 head-tail adaptor connector 1 9335 9691
AVO24792.1 MG962364_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30156 30434
AVO24807.1 MG962364_p53 hypothetical protein phrog_3186 unknown function unknown function 1 39292 39672
AVO24780.1 MG962364_p24 minor tail protein phrog_1565 minor tail protein tail 1 19448 20530
AVO24823.1 MG962364_p69 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47787 48485
AVO24802.1 MG962364_p48 helix-turn-helix DNA binding domain protein phrog_2286 unknown function unknown function 1 36811 37602
AVO24811.1 MG962364_p57 hypothetical protein phrog_2596 unknown function unknown function 1 40717 40983
AVO24828.1 MG962364_p74 hypothetical protein phrog_1338 unknown function unknown function 1 50485 50757
AVO24779.1 MG962364_p23 minor tail protein phrog_1697 minor tail protein tail 1 18888 19364
AVO24805.1 MG962364_p51 hypothetical protein phrog_542 unknown function unknown function 1 38743 38913
AVO24766.1 MG962364_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4566 7073
AVO24784.1 MG962364_p28 hypothetical protein phrog_240 head protein head and packaging 1 24387 24758
AVO24814.1 MG962364_p60 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41461 42348
AVO24761.1 MG962364_p4 hypothetical protein phrog_2293 unknown function unknown function 1 727 945
AVO24834.1 MG962364_p80 hypothetical protein phrog_5794 unknown function unknown function 1 53273 53638
AVO24826.1 MG962364_p72 hypothetical protein phrog_908 unknown function unknown function 1 49136 50242
AVO24798.1 MG962364_p44 helix-turn-helix DNA binding domain protein phrog_1840 excisionase integration and excision 1 35641 35907
AVO24760.1 MG962364_p3 hypothetical protein phrog_2074 unknown function unknown function 1 476 730
AVO24762.1 MG962364_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1171 1371
AVO24770.1 MG962364_p13 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 8994 9338
AVO24817.1 MG962364_p63 hypothetical protein phrog_1581 unknown function unknown function 1 43078 43293
AVO24800.1 MG962364_p46 membrane protein phrog_2654 unknown function unknown function 1 36438 36605
AVO24797.1 MG962364_p42 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 34845 35225
AVO24794.1 MG962364_p38 hypothetical protein phrog_4095 unknown function unknown function 1 31314 32003
AVO24851.1 MG962364_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11203 12050
AVO24806.1 MG962364_p52 hypothetical protein phrog_301 secreted protein other 1 38945 39295
AVO24838.1 MG962364_p84 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54458 55645
AVO24829.1 MG962364_p75 protease phrog_1006 unknown function unknown function 1 50830 51291
AVO24831.1 MG962364_p77 hypothetical protein phrog_5776 unknown function unknown function 1 51773 51901
AVO24820.1 MG962364_p66 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44105 44347
AVO24758.1 MG962364_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 297
AVO24827.1 MG962364_p73 hypothetical protein phrog_4269 unknown function unknown function 1 50255 50488
AVO24803.1 MG962364_p49 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 37599 37862
AVO24813.1 MG962364_p59 hypothetical protein phrog_1498 unknown function unknown function 1 41297 41464
AVO24821.1 MG962364_p67 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44347 44718
AVO24848.1 MG962364_p94 hypothetical protein phrog_5633 unknown function unknown function 1 59923 60105
AVO24769.1 MG962364_p12 major capsid protein phrog_10 major head protein head and packaging 1 7902 8840
AVO24796.1 MG962364_p40 integrase phrog_1 integrase integration and excision 1 32726 33811
AVO24781.1 MG962364_p25 minor tail protein phrog_1736 minor tail protein tail 1 20537 20845
AVO24810.1 MG962364_p56 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40163 40717
AVO24785.1 MG962364_p29 lysin A phrog_1519 endolysin lysis 1 24776 26431
AVO24808.1 MG962364_p54 hypothetical protein phrog_1956 unknown function unknown function 1 39673 39951
AVO24840.1 MG962364_p86 hypothetical protein phrog_2822 unknown function unknown function 1 56043 56654
AVO24818.1 MG962364_p64 hypothetical protein phrog_2388 unknown function unknown function 1 43293 43412
AVO24764.1 MG962364_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1575 2996
AVO24773.1 MG962364_p16 head-to-tail connector complex protein phrog_123 tail terminator connector 1 9950 10375
AVO24835.1 MG962364_p81 hypothetical protein phrog_5288 unknown function unknown function 1 53638 53940
AVO24836.1 MG962364_p82 hypothetical protein phrog_666 unknown function unknown function 1 53940 54137
AVO24850.1 MG962364_p43 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 35405 35644
AVO24767.1 MG962364_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7070 7255
AVO24812.1 MG962364_p58 hypothetical protein phrog_2870 unknown function unknown function 1 40980 41300
AVO24825.1 MG962364_p71 hypothetical protein phrog_6689 unknown function unknown function 1 48936 49139
AVO24759.1 MG962364_p2 hypothetical protein phrog_5284 unknown function unknown function 1 294 479
AVO24768.1 MG962364_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7293 7826
AVO24824.1 MG962364_p70 hypothetical protein phrog_3478 unknown function unknown function 1 48478 48939
AVO24841.1 MG962364_p87 hypothetical protein phrog_2493 unknown function unknown function 1 56647 57195
AVO24822.1 MG962364_p68 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44760 47378
AVO24809.1 MG962364_p55 hypothetical protein phrog_4832 unknown function unknown function 1 39948 40151