| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG962369 |
Definition |
Gordonia phage Kerry, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
59608 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
93 |
%GC |
51.06 |
Number of singletons |
37 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO25349.1 | MG962369_p15 | hypothetical protein | phrog_7502 | unknown function | unknown function | 1 | 9377 | 10219 |
| AVO25392.1 | MG962369_p59 | hypothetical protein | phrog_4695 | unknown function | unknown function | 1 | 40079 | 41023 |
| AVO25363.1 | MG962369_p30 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 25727 | 26581 |
| AVO25384.1 | MG962369_p51 | hypothetical protein | phrog_27587 | unknown function | unknown function | 1 | 35510 | 35755 |
| AVO25361.1 | MG962369_p28 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20233 | 20616 |
| AVO25420.1 | MG962369_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54674 | 54787 |
| AVO25405.1 | MG962369_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50004 | 50204 |
| AVO25365.1 | MG962369_p32 | hypothetical protein | phrog_24913 | unknown function | unknown function | 1 | 28036 | 28695 |
| AVO25373.1 | MG962369_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31023 | 31295 |
| AVO25382.1 | MG962369_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35058 | 35285 |
| AVO25374.1 | MG962369_p41 | hypothetical protein | phrog_26966 | unknown function | unknown function | 1 | 31295 | 31546 |
| AVO25371.1 | MG962369_p38 | hypothetical protein | phrog_12653 | unknown function | unknown function | 1 | 30481 | 30657 |
| AVO25339.1 | MG962369_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1834 | 2283 |
| AVO25398.1 | MG962369_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46526 | 46816 |
| AVO25388.1 | MG962369_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37801 | 38076 |
| AVO25342.1 | MG962369_p8 | HNH endonuclease | phrog_4321 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3096 | 3503 |
| AVO25414.1 | MG962369_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52194 | 52352 |
| AVO25376.1 | MG962369_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31621 | 31713 |
| AVO25387.1 | MG962369_p54 | hypothetical protein | phrog_27818 | unknown function | unknown function | 1 | 37237 | 37641 |
| AVO25415.1 | MG962369_p83 | hypothetical protein | phrog_27818 | unknown function | unknown function | 1 | 52442 | 52822 |
| AVO25352.1 | MG962369_p18 | hypothetical protein | phrog_12541 | unknown function | unknown function | 1 | 12093 | 12707 |
| AVO25402.1 | MG962369_p69 | thymidylate synthase | singleton | unknown function | unknown function | 1 | 48039 | 49100 |
| AVO25410.1 | MG962369_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51123 | 51356 |
| AVO25396.1 | MG962369_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45839 | 46009 |
| AVO25417.1 | MG962369_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53165 | 53335 |
| AVO25386.1 | MG962369_p53 | hypothetical protein | phrog_4282 | unknown function | unknown function | 1 | 36473 | 37072 |
| AVO25341.1 | MG962369_p7 | hypothetical protein | phrog_4259 | unknown function | unknown function | 1 | 2747 | 3103 |
| AVO25345.1 | MG962369_p11 | head-to-tail connector complex protein | phrog_4247 | virion structural protein | head and packaging | 1 | 5284 | 5631 |
| AVO25390.1 | MG962369_p57 | hypothetical protein | phrog_4079 | unknown function | unknown function | 1 | 38457 | 39131 |
| AVO25404.1 | MG962369_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49744 | 49932 |
| AVO25370.1 | MG962369_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30191 | 30370 |
| AVO25359.1 | MG962369_p26 | hypothetical protein | phrog_23770 | unknown function | unknown function | 1 | 18373 | 19398 |
| AVO25343.1 | MG962369_p9 | lysin A | phrog_880 | endolysin | lysis | 1 | 3518 | 4801 |
| AVO25394.1 | MG962369_p61 | hypothetical protein | phrog_4210 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 41607 | 45446 |
| AVO25412.1 | MG962369_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51822 | 51950 |
| AVO25399.1 | MG962369_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46809 | 46955 |
| AVO25354.1 | MG962369_p21 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 15208 | 15510 |
| AVO25403.1 | MG962369_p71 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 49349 | 49747 |
| AVO25360.1 | MG962369_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 19428 | 20213 |
| AVO25355.1 | MG962369_p22 | major tail protein | phrog_2645 | major tail protein | tail | 1 | 15525 | 16415 |
| AVO25427.1 | MG962369_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49110 | 49286 |
| AVO25338.1 | MG962369_p4 | hypothetical protein | phrog_4757 | unknown function | unknown function | 1 | 1145 | 1834 |
| AVO25357.1 | MG962369_p24 | major tail protein | phrog_2645 | major tail protein | tail | 1 | 17033 | 17839 |
| AVO25344.1 | MG962369_p10 | holin | singleton | unknown function | unknown function | 1 | 4801 | 5235 |
| AVO25351.1 | MG962369_p17 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 10768 | 12090 |
| AVO25391.1 | MG962369_p58 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 39185 | 40066 |
| AVO25418.1 | MG962369_p86 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 53377 | 54597 |
| AVO25380.1 | MG962369_p47 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 34031 | 34807 |
| AVO25372.1 | MG962369_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30710 | 30958 |
| AVO25340.1 | MG962369_p6 | hypothetical protein | phrog_9930 | unknown function | unknown function | 1 | 2265 | 2726 |
| AVO25375.1 | MG962369_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31761 | 31970 |
| AVO25356.1 | MG962369_p23 | hypothetical protein | phrog_4338 | unknown function | unknown function | 1 | 16451 | 17017 |
| AVO25350.1 | MG962369_p16 | hypothetical protein | phrog_14126 | unknown function | unknown function | 1 | 10241 | 10717 |
| AVO25395.1 | MG962369_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45529 | 45855 |
| AVO25336.1 | MG962369_p2 | hypothetical protein | phrog_1126 | unknown function | unknown function | 1 | 472 | 825 |
| AVO25346.1 | MG962369_p12 | hypothetical protein | phrog_24711 | unknown function | unknown function | 1 | 5628 | 7193 |
| AVO25362.1 | MG962369_p29 | tapemeasure protein | phrog_4372 | tail length tape measure protein | tail | 1 | 20616 | 25730 |
| AVO25401.1 | MG962369_p68 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 47589 | 47864 |
| AVO25366.1 | MG962369_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28652 | 28771 |
| AVO25425.1 | MG962369_p93 | hypothetical protein | phrog_4303 | unknown function | unknown function | 1 | 59190 | 59438 |
| AVO25419.1 | MG962369_p87 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54601 | 54711 |
| AVO25411.1 | MG962369_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51337 | 51780 |
| AVO25413.1 | MG962369_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51952 | 52209 |
| AVO25408.1 | MG962369_p76 | hypothetical protein | phrog_3848 | unknown function | unknown function | 1 | 50523 | 50810 |
| AVO25424.1 | MG962369_p92 | helix-turn-helix DNA binding domain protein | phrog_4291 | RNA-dependent RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 56466 | 59180 |
| AVO25397.1 | MG962369_p64 | deoxycytidylate deaminase | phrog_2369 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 45990 | 46505 |
| AVO25406.1 | MG962369_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50223 | 50318 |
| AVO25383.1 | MG962369_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35278 | 35472 |
| AVO25347.1 | MG962369_p13 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7213 | 8958 |
| AVO25421.1 | MG962369_p89 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55009 | 55491 |
| AVO25367.1 | MG962369_p34 | hypothetical protein | phrog_5818 | unknown function | unknown function | 1 | 28833 | 29132 |
| AVO25369.1 | MG962369_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29812 | 30033 |
| AVO25393.1 | MG962369_p60 | hypothetical protein | phrog_4678 | unknown function | unknown function | 1 | 41020 | 41577 |
| AVO25368.1 | MG962369_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29271 | 29585 |
| AVO25335.1 | MG962369_p1 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 221 | 445 |
| AVO25416.1 | MG962369_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52910 | 53155 |
| AVO25407.1 | MG962369_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50367 | 50483 |
| AVO25337.1 | MG962369_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 818 | 1135 |
| AVO25400.1 | MG962369_p67 | hypothetical protein | phrog_4787 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 46957 | 47544 |
| AVO25348.1 | MG962369_p14 | hypothetical protein | phrog_14126 | unknown function | unknown function | 1 | 8981 | 9364 |
| AVO25409.1 | MG962369_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50810 | 51112 |
| AVO25381.1 | MG962369_p48 | hypothetical protein | phrog_25998 | unknown function | unknown function | 1 | 34838 | 35065 |
| AVO25377.1 | MG962369_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31989 | 32243 |
| AVO25378.1 | MG962369_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32258 | 32452 |
| AVO25389.1 | MG962369_p56 | hypothetical protein | phrog_7539 | unknown function | unknown function | 1 | 38129 | 38380 |
| AVO25364.1 | MG962369_p31 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 26585 | 28012 |
| AVO25422.1 | MG962369_p90 | hydrolase | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55610 | 55915 |
| AVO25353.1 | MG962369_p19 | capsid & capsid maturation protease | phrog_3270 | head maturation protease | head and packaging | 1 | 12753 | 14885 |
| AVO25379.1 | MG962369_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32537 | 33985 |
| AVO25385.1 | MG962369_p52 | hypothetical protein | phrog_6802 | unknown function | unknown function | 1 | 36023 | 36433 |
| AVO25423.1 | MG962369_p91 | exonuclease | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 55881 | 56438 |
| AVO25426.1 | MG962369_p20 | hypothetical protein | phrog_4270 | unknown function | unknown function | 1 | 14895 | 15245 |
| AVO25358.1 | MG962369_p25 | hypothetical protein | phrog_22009 | unknown function | unknown function | 1 | 17849 | 18376 |