| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG962370 |
Definition |
Mycobacterium phage Kykar, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
50294 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
87 |
%GC |
63.65 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO25433.1 | MG962370_p6 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 3875 | 4132 |
| AVO25470.1 | MG962370_p45 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34825 | 35055 |
| AVO25505.1 | MG962370_p81 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 48028 | 48156 |
| AVO25448.1 | MG962370_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18550 | 20607 |
| AVO25472.1 | MG962370_p47 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35562 | 35744 |
| AVO25440.1 | MG962370_p13 | major capsid subunit | phrog_10 | major head protein | head and packaging | 1 | 11172 | 12365 |
| AVO25430.1 | MG962370_p3 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 1803 | 2873 |
| AVO25456.1 | MG962370_p31 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25906 | 27384 |
| AVO25467.1 | MG962370_p42 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32077 | 32433 |
| AVO25513.1 | MG962370_p54 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38583 | 39098 |
| AVO25441.1 | MG962370_p14 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12431 | 12808 |
| AVO25468.1 | MG962370_p43 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32458 | 32934 |
| AVO25473.1 | MG962370_p48 | helix-turn-helix DNA binding protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35741 | 36526 |
| AVO25454.1 | MG962370_p29 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 23709 | 24035 |
| AVO25451.1 | MG962370_p26 | hypothetical protein | phrog_23972 | unknown function | unknown function | 1 | 22624 | 22788 |
| AVO25443.1 | MG962370_p16 | head-to-tail connector complex protein | phrog_320 | head closure Hc1 | connector | 1 | 12930 | 13310 |
| AVO25508.1 | MG962370_p84 | hypothetical protein | phrog_2985 | unknown function | unknown function | -1 | 48878 | 49033 |
| AVO25484.1 | MG962370_p60 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 41032 | 41163 |
| AVO25435.1 | MG962370_p8 | lysin B | phrog_102 | endolysin | lysis | 1 | 5555 | 6523 |
| AVO25461.1 | MG962370_p36 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 30550 | 30822 |
| AVO25464.1 | MG962370_p39 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31534 | 31704 |
| AVO25504.1 | MG962370_p80 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47864 | 48031 |
| AVO25431.1 | MG962370_p4 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 2883 | 3593 |
| AVO25442.1 | MG962370_p15 | hypothetical protein | phrog_2348 | unknown function | unknown function | 1 | 12805 | 12933 |
| AVO25483.1 | MG962370_p59 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 40566 | 41045 |
| AVO25493.1 | MG962370_p69 | hypothetical protein | phrog_5961 | unknown function | unknown function | -1 | 43871 | 44029 |
| AVO25462.1 | MG962370_p37 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 30819 | 31208 |
| AVO25514.1 | MG962370_p20 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15136 | 15935 |
| AVO25447.1 | MG962370_p22 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 15947 | 18526 |
| AVO25500.1 | MG962370_p76 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 46812 | 47081 |
| AVO25491.1 | MG962370_p67 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 43158 | 43688 |
| AVO25474.1 | MG962370_p49 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36519 | 36659 |
| AVO25501.1 | MG962370_p77 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 47078 | 47281 |
| AVO25499.1 | MG962370_p75 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46522 | 46815 |
| AVO25478.1 | MG962370_p53 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38216 | 38794 |
| AVO25509.1 | MG962370_p85 | hypothetical protein | phrog_10288 | unknown function | unknown function | -1 | 49241 | 49480 |
| AVO25495.1 | MG962370_p71 | hypothetical protein | phrog_1311 | unknown function | unknown function | -1 | 44870 | 45010 |
| AVO25507.1 | MG962370_p83 | hypothetical protein | phrog_18281 | unknown function | unknown function | -1 | 48599 | 48808 |
| AVO25434.1 | MG962370_p7 | lysin A | phrog_317 | endolysin | lysis | 1 | 4132 | 5565 |
| AVO25494.1 | MG962370_p70 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44059 | 44877 |
| AVO25502.1 | MG962370_p78 | hypothetical protein | phrog_1546 | unknown function | unknown function | -1 | 47278 | 47679 |
| AVO25437.1 | MG962370_p10 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8234 | 9700 |
| AVO25465.1 | MG962370_p40 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31701 | 31796 |
| AVO25459.1 | MG962370_p34 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 28019 | 28705 |
| AVO25432.1 | MG962370_p5 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3607 | 3867 |
| AVO25512.1 | MG962370_p21 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15136 | 15513 |
| AVO25450.1 | MG962370_p25 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20786 | 22588 |
| AVO25511.1 | MG962370_p87 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 49701 | 49910 |
| AVO25452.1 | MG962370_p27 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22901 | 23347 |
| AVO25444.1 | MG962370_p17 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13310 | 13705 |
| AVO25481.1 | MG962370_p57 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39303 | 39437 |
| AVO25455.1 | MG962370_p30 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24060 | 25913 |
| AVO25445.1 | MG962370_p18 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 13709 | 14155 |
| AVO25429.1 | MG962370_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 928 | 1368 |
| AVO25439.1 | MG962370_p12 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10642 | 11139 |
| AVO25453.1 | MG962370_p28 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23344 | 23691 |
| AVO25503.1 | MG962370_p79 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 47676 | 47864 |
| AVO25479.1 | MG962370_p55 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39077 | 39241 |
| AVO25486.1 | MG962370_p62 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 41462 | 41758 |
| AVO25498.1 | MG962370_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45749 | 46261 |
| AVO25488.1 | MG962370_p64 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 42579 | 42752 |
| AVO25477.1 | MG962370_p52 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37605 | 38219 |
| AVO25463.1 | MG962370_p38 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 31205 | 31534 |
| AVO25510.1 | MG962370_p86 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 49509 | 49592 |
| AVO25492.1 | MG962370_p68 | helix-turn-helix DNA binding domain protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 43692 | 43874 |
| AVO25428.1 | MG962370_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 597 | 893 |
| AVO25469.1 | MG962370_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32959 | 34788 |
| AVO25438.1 | MG962370_p11 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9697 | 10581 |
| AVO25458.1 | MG962370_p33 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27807 | 28019 |
| AVO25449.1 | MG962370_p24 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 20604 | 20786 |
| AVO25457.1 | MG962370_p32 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27471 | 27797 |
| AVO25485.1 | MG962370_p61 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 41115 | 41465 |
| AVO25471.1 | MG962370_p46 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35086 | 35565 |
| AVO25436.1 | MG962370_p9 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 6543 | 8234 |
| AVO25497.1 | MG962370_p73 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 45312 | 45707 |
| AVO25489.1 | MG962370_p65 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 42749 | 42871 |
| AVO25487.1 | MG962370_p63 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41758 | 42579 |
| AVO25480.1 | MG962370_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39241 | 39306 |
| AVO25475.1 | MG962370_p50 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 36659 | 37426 |
| AVO25466.1 | MG962370_p41 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31793 | 32080 |
| AVO25446.1 | MG962370_p19 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14164 | 15015 |
| AVO25490.1 | MG962370_p66 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42868 | 43161 |
| AVO25460.1 | MG962370_p35 | integrase | phrog_95 | integrase | integration and excision | 1 | 28846 | 30429 |
| AVO25506.1 | MG962370_p82 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 48177 | 48329 |
| AVO25476.1 | MG962370_p51 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37423 | 37608 |
| AVO25496.1 | MG962370_p72 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 45007 | 45315 |
| AVO25482.1 | MG962370_p58 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 39463 | 40569 |