| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG962371 |
Definition |
Mycobacterium phage LaterM, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
60143 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
66.54 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO25591.1 | MG962371_p77 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51728 | 52003 |
| AVO25524.1 | MG962371_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7060 | 7263 |
| AVO25559.1 | MG962371_p45 | excise | phrog_1840 | excisionase | integration and excision | 1 | 36290 | 36556 |
| AVO25547.1 | MG962371_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28069 | 28320 |
| AVO25587.1 | MG962371_p73 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50546 | 50779 |
| AVO25578.1 | MG962371_p64 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43502 | 43621 |
| AVO25581.1 | MG962371_p67 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44555 | 44926 |
| AVO25609.1 | MG962371_p95 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59784 | 60086 |
| AVO25570.1 | MG962371_p56 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 40655 | 40855 |
| AVO25558.1 | MG962371_p44 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36054 | 36293 |
| AVO25577.1 | MG962371_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 43287 | 43502 |
| AVO25548.1 | MG962371_p34 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28307 | 29515 |
| AVO25608.1 | MG962371_p94 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59602 | 59787 |
| AVO25579.1 | MG962371_p65 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43705 | 44214 |
| AVO25554.1 | MG962371_p40 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 32716 | 33018 |
| AVO25518.1 | MG962371_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 703 | 936 |
| AVO25585.1 | MG962371_p71 | hypothetical protein | phrog_6689 | unknown function | unknown function | 1 | 49144 | 49347 |
| AVO25523.1 | MG962371_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4559 | 7063 |
| AVO25533.1 | MG962371_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11198 | 12042 |
| AVO25543.1 | MG962371_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24741 | 26390 |
| AVO25546.1 | MG962371_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27710 | 28072 |
| AVO25565.1 | MG962371_p51 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 38493 | 39431 |
| AVO25606.1 | MG962371_p92 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58710 | 58979 |
| AVO25584.1 | MG962371_p70 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48686 | 49147 |
| AVO25517.1 | MG962371_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 452 | 706 |
| AVO25556.1 | MG962371_p42 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 34568 | 35407 |
| AVO25516.1 | MG962371_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 270 | 455 |
| AVO25549.1 | MG962371_p35 | helix-turn-helix DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29708 | 30139 |
| AVO25521.1 | MG962371_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1568 | 2989 |
| AVO25595.1 | MG962371_p81 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 53597 | 53857 |
| AVO25575.1 | MG962371_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42758 | 42952 |
| AVO25527.1 | MG962371_p13 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8945 | 9325 |
| AVO25529.1 | MG962371_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 9659 | 9940 |
| AVO25545.1 | MG962371_p31 | holin | phrog_565 | holin | lysis | 1 | 27270 | 27710 |
| AVO25592.1 | MG962371_p78 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 52089 | 52226 |
| AVO25596.1 | MG962371_p82 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53857 | 54054 |
| AVO25598.1 | MG962371_p84 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 54318 | 55505 |
| AVO25528.1 | MG962371_p14 | head-to-tail connector complex protein | phrog_763 | head-tail adaptor | connector | 1 | 9322 | 9678 |
| AVO25532.1 | MG962371_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11198 | 11632 |
| AVO25566.1 | MG962371_p52 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 39443 | 39613 |
| AVO25525.1 | MG962371_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7280 | 7822 |
| AVO25555.1 | MG962371_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 33376 | 34464 |
| AVO25589.1 | MG962371_p75 | hypothetical protein | phrog_19203 | unknown function | unknown function | 1 | 51159 | 51347 |
| AVO25530.1 | MG962371_p16 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 9937 | 10362 |
| AVO25586.1 | MG962371_p72 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 49344 | 50534 |
| AVO25534.1 | MG962371_p20 | tapemeasure protein | phrog_971 | endolysin | lysis | 1 | 12043 | 15876 |
| AVO25582.1 | MG962371_p68 | DNA primase/polymerase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44968 | 47586 |
| AVO25562.1 | MG962371_p48 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 37236 | 37448 |
| AVO25563.1 | MG962371_p49 | helix-turn-helix DNA binding domain protein | phrog_2286 | unknown function | unknown function | 1 | 37445 | 38236 |
| AVO25540.1 | MG962371_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20812 | 23244 |
| AVO25572.1 | MG962371_p58 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 41420 | 41719 |
| AVO25607.1 | MG962371_p93 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 59378 | 59608 |
| AVO25541.1 | MG962371_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23256 | 24269 |
| AVO25526.1 | MG962371_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7898 | 8833 |
| AVO25552.1 | MG962371_p38 | hypothetical protein | phrog_7081 | unknown function | unknown function | 1 | 31293 | 31691 |
| AVO25601.1 | MG962371_p87 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56471 | 57040 |
| AVO25551.1 | MG962371_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30491 | 31177 |
| AVO25539.1 | MG962371_p25 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20549 | 20809 |
| AVO25515.1 | MG962371_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 273 |
| AVO25519.1 | MG962371_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1161 | 1364 |
| AVO25568.1 | MG962371_p54 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39999 | 40379 |
| AVO25597.1 | MG962371_p83 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 54051 | 54203 |
| AVO25574.1 | MG962371_p60 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41874 | 42761 |
| AVO25564.1 | MG962371_p50 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38233 | 38496 |
| AVO25538.1 | MG962371_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19444 | 20529 |
| AVO25605.1 | MG962371_p91 | HicA-like toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 58345 | 58560 |
| AVO25531.1 | MG962371_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10463 | 11074 |
| AVO25571.1 | MG962371_p57 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40866 | 41420 |
| AVO25542.1 | MG962371_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24351 | 24722 |
| AVO25561.1 | MG962371_p47 | membrane domain protein | phrog_2654 | unknown function | unknown function | 1 | 37072 | 37239 |
| AVO25593.1 | MG962371_p79 | membrane protein | phrog_2342 | unknown function | unknown function | 1 | 52223 | 53113 |
| AVO25544.1 | MG962371_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26387 | 27259 |
| AVO25590.1 | MG962371_p76 | hypothetical protein | phrog_32816 | unknown function | unknown function | 1 | 51396 | 51650 |
| AVO25573.1 | MG962371_p59 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41716 | 41877 |
| AVO25599.1 | MG962371_p85 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55505 | 55885 |
| AVO25594.1 | MG962371_p80 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 53110 | 53586 |
| AVO25537.1 | MG962371_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18882 | 19358 |
| AVO25560.1 | MG962371_p46 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 36558 | 36899 |
| AVO25604.1 | MG962371_p90 | HicB-like antitoxin | phrog_5243 | unknown function | unknown function | 1 | 58027 | 58224 |
| AVO25569.1 | MG962371_p55 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40380 | 40658 |
| AVO25535.1 | MG962371_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15979 | 17115 |
| AVO25536.1 | MG962371_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17116 | 18882 |
| AVO25576.1 | MG962371_p62 | hypothetical protein | phrog_5466 | unknown function | unknown function | 1 | 43006 | 43290 |
| AVO25557.1 | MG962371_p43 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35497 | 35874 |
| AVO25603.1 | MG962371_p89 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 57366 | 57995 |
| AVO25553.1 | MG962371_p39 | queuine tRNA-ribosyltransferase | phrog_1279 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 31797 | 32651 |
| AVO25600.1 | MG962371_p86 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55885 | 56478 |
| AVO25550.1 | MG962371_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30136 | 30414 |
| AVO25520.1 | MG962371_p6 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1357 | 1584 |
| AVO25588.1 | MG962371_p74 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50776 | 51048 |
| AVO25567.1 | MG962371_p53 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 39652 | 40002 |
| AVO25522.1 | MG962371_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3001 | 4554 |
| AVO25583.1 | MG962371_p69 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47995 | 48693 |
| AVO25602.1 | MG962371_p88 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 57037 | 57198 |
| AVO25580.1 | MG962371_p66 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 44313 | 44555 |