Genomic map of Mycobacterium phage LaterM (MG962371)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG962371
Definition
Mycobacterium phage LaterM, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
60143
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
66.54
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO25591.1 MG962371_p77 hypothetical protein phrog_2974 unknown function unknown function 1 51728 52003
AVO25524.1 MG962371_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7060 7263
AVO25559.1 MG962371_p45 excise phrog_1840 excisionase integration and excision 1 36290 36556
AVO25547.1 MG962371_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28069 28320
AVO25587.1 MG962371_p73 hypothetical protein phrog_4269 unknown function unknown function 1 50546 50779
AVO25578.1 MG962371_p64 hypothetical protein phrog_2388 unknown function unknown function 1 43502 43621
AVO25581.1 MG962371_p67 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44555 44926
AVO25609.1 MG962371_p95 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59784 60086
AVO25570.1 MG962371_p56 hypothetical protein phrog_4832 unknown function unknown function 1 40655 40855
AVO25558.1 MG962371_p44 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 36054 36293
AVO25577.1 MG962371_p63 hypothetical protein phrog_1581 unknown function unknown function 1 43287 43502
AVO25548.1 MG962371_p34 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28307 29515
AVO25608.1 MG962371_p94 hypothetical protein phrog_5633 unknown function unknown function 1 59602 59787
AVO25579.1 MG962371_p65 hypothetical protein phrog_1911 unknown function unknown function 1 43705 44214
AVO25554.1 MG962371_p40 hypothetical protein phrog_658 unknown function unknown function -1 32716 33018
AVO25518.1 MG962371_p4 hypothetical protein phrog_2293 unknown function unknown function 1 703 936
AVO25585.1 MG962371_p71 hypothetical protein phrog_6689 unknown function unknown function 1 49144 49347
AVO25523.1 MG962371_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4559 7063
AVO25533.1 MG962371_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11198 12042
AVO25543.1 MG962371_p29 lysin A phrog_1519 endolysin lysis 1 24741 26390
AVO25546.1 MG962371_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27710 28072
AVO25565.1 MG962371_p51 hypothetical protein phrog_2781 unknown function unknown function 1 38493 39431
AVO25606.1 MG962371_p92 hypothetical protein phrog_4560 unknown function unknown function 1 58710 58979
AVO25584.1 MG962371_p70 hypothetical protein phrog_3478 unknown function unknown function 1 48686 49147
AVO25517.1 MG962371_p3 hypothetical protein phrog_2074 unknown function unknown function 1 452 706
AVO25556.1 MG962371_p42 membrane protein phrog_950 unknown function unknown function -1 34568 35407
AVO25516.1 MG962371_p2 hypothetical protein phrog_5284 unknown function unknown function 1 270 455
AVO25549.1 MG962371_p35 helix-turn-helix DNA binding domain protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29708 30139
AVO25521.1 MG962371_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1568 2989
AVO25595.1 MG962371_p81 hypothetical protein phrog_5288 unknown function unknown function 1 53597 53857
AVO25575.1 MG962371_p61 hypothetical protein phrog_3492 unknown function unknown function 1 42758 42952
AVO25527.1 MG962371_p13 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 8945 9325
AVO25529.1 MG962371_p15 hypothetical protein phrog_387 neck protein connector 1 9659 9940
AVO25545.1 MG962371_p31 holin phrog_565 holin lysis 1 27270 27710
AVO25592.1 MG962371_p78 hypothetical protein phrog_5776 unknown function unknown function 1 52089 52226
AVO25596.1 MG962371_p82 hypothetical protein phrog_666 unknown function unknown function 1 53857 54054
AVO25598.1 MG962371_p84 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54318 55505
AVO25528.1 MG962371_p14 head-to-tail connector complex protein phrog_763 head-tail adaptor connector 1 9322 9678
AVO25532.1 MG962371_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11198 11632
AVO25566.1 MG962371_p52 hypothetical protein phrog_542 unknown function unknown function 1 39443 39613
AVO25525.1 MG962371_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7280 7822
AVO25555.1 MG962371_p41 integrase phrog_1 integrase integration and excision 1 33376 34464
AVO25589.1 MG962371_p75 hypothetical protein phrog_19203 unknown function unknown function 1 51159 51347
AVO25530.1 MG962371_p16 head-to-tail connector complex protein phrog_123 tail terminator connector 1 9937 10362
AVO25586.1 MG962371_p72 hypothetical protein phrog_908 unknown function unknown function 1 49344 50534
AVO25534.1 MG962371_p20 tapemeasure protein phrog_971 endolysin lysis 1 12043 15876
AVO25582.1 MG962371_p68 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44968 47586
AVO25562.1 MG962371_p48 hypothetical protein phrog_3903 unknown function unknown function 1 37236 37448
AVO25563.1 MG962371_p49 helix-turn-helix DNA binding domain protein phrog_2286 unknown function unknown function 1 37445 38236
AVO25540.1 MG962371_p26 minor tail protein phrog_346 minor tail protein tail 1 20812 23244
AVO25572.1 MG962371_p58 hypothetical protein phrog_2596 unknown function unknown function 1 41420 41719
AVO25607.1 MG962371_p93 hypothetical protein phrog_4561 unknown function unknown function 1 59378 59608
AVO25541.1 MG962371_p27 minor tail protein phrog_416 minor tail protein tail 1 23256 24269
AVO25526.1 MG962371_p12 major capsid protein phrog_10 major head protein head and packaging 1 7898 8833
AVO25552.1 MG962371_p38 hypothetical protein phrog_7081 unknown function unknown function 1 31293 31691
AVO25601.1 MG962371_p87 hypothetical protein phrog_2493 unknown function unknown function 1 56471 57040
AVO25551.1 MG962371_p37 hypothetical protein phrog_2433 unknown function unknown function 1 30491 31177
AVO25539.1 MG962371_p25 minor tail protein phrog_1736 minor tail protein tail 1 20549 20809
AVO25515.1 MG962371_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 273
AVO25519.1 MG962371_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1161 1364
AVO25568.1 MG962371_p54 hypothetical protein phrog_3186 unknown function unknown function 1 39999 40379
AVO25597.1 MG962371_p83 hypothetical protein phrog_6426 unknown function unknown function 1 54051 54203
AVO25574.1 MG962371_p60 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41874 42761
AVO25564.1 MG962371_p50 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 38233 38496
AVO25538.1 MG962371_p24 minor tail protein phrog_1565 minor tail protein tail 1 19444 20529
AVO25605.1 MG962371_p91 HicA-like toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58345 58560
AVO25531.1 MG962371_p17 major tail protein phrog_117 major tail protein tail 1 10463 11074
AVO25571.1 MG962371_p57 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40866 41420
AVO25542.1 MG962371_p28 hypothetical protein phrog_240 head protein head and packaging 1 24351 24722
AVO25561.1 MG962371_p47 membrane domain protein phrog_2654 unknown function unknown function 1 37072 37239
AVO25593.1 MG962371_p79 membrane protein phrog_2342 unknown function unknown function 1 52223 53113
AVO25544.1 MG962371_p30 lysin B phrog_102 endolysin lysis 1 26387 27259
AVO25590.1 MG962371_p76 hypothetical protein phrog_32816 unknown function unknown function 1 51396 51650
AVO25573.1 MG962371_p59 hypothetical protein phrog_1498 unknown function unknown function 1 41716 41877
AVO25599.1 MG962371_p85 hypothetical protein phrog_3167 unknown function unknown function 1 55505 55885
AVO25594.1 MG962371_p80 hypothetical protein phrog_3868 unknown function unknown function 1 53110 53586
AVO25537.1 MG962371_p23 minor tail protein phrog_1697 minor tail protein tail 1 18882 19358
AVO25560.1 MG962371_p46 hypothetical protein phrog_2908 unknown function unknown function 1 36558 36899
AVO25604.1 MG962371_p90 HicB-like antitoxin phrog_5243 unknown function unknown function 1 58027 58224
AVO25569.1 MG962371_p55 hypothetical protein phrog_1956 unknown function unknown function 1 40380 40658
AVO25535.1 MG962371_p21 minor tail protein phrog_106 minor tail protein tail 1 15979 17115
AVO25536.1 MG962371_p22 minor tail protein phrog_110 minor tail protein tail 1 17116 18882
AVO25576.1 MG962371_p62 hypothetical protein phrog_5466 unknown function unknown function 1 43006 43290
AVO25557.1 MG962371_p43 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35497 35874
AVO25603.1 MG962371_p89 hypothetical protein phrog_5812 unknown function unknown function 1 57366 57995
AVO25553.1 MG962371_p39 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 31797 32651
AVO25600.1 MG962371_p86 hypothetical protein phrog_2822 unknown function unknown function 1 55885 56478
AVO25550.1 MG962371_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30136 30414
AVO25520.1 MG962371_p6 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1357 1584
AVO25588.1 MG962371_p74 hypothetical protein phrog_1338 unknown function unknown function 1 50776 51048
AVO25567.1 MG962371_p53 hypothetical protein phrog_301 secreted protein other 1 39652 40002
AVO25522.1 MG962371_p8 portal protein phrog_104 portal protein head and packaging 1 3001 4554
AVO25583.1 MG962371_p69 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47995 48693
AVO25602.1 MG962371_p88 hypothetical protein phrog_3665 unknown function unknown function 1 57037 57198
AVO25580.1 MG962371_p66 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44313 44555