| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG962372 |
Definition |
Mycobacterium phage McGuire, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
51521 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
63.73 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO25650.1 | MG962372_p42 | hypothetical protein | phrog_9812 | unknown function | unknown function | -1 | 31887 | 32138 |
| AVO25662.1 | MG962372_p54 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37724 | 38290 |
| AVO25684.1 | MG962372_p77 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 46348 | 46551 |
| AVO25681.1 | MG962372_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45012 | 45524 |
| AVO25616.1 | MG962372_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4048 | 4305 |
| AVO25611.1 | MG962372_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 749 | 1045 |
| AVO25690.1 | MG962372_p84 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 48110 | 48751 |
| AVO25640.1 | MG962372_p32 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25972 | 27450 |
| AVO25636.1 | MG962372_p28 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22967 | 23413 |
| AVO25648.1 | MG962372_p40 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31481 | 31576 |
| AVO25659.1 | MG962372_p51 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36639 | 36779 |
| AVO25641.1 | MG962372_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27543 | 27863 |
| AVO25635.1 | MG962372_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21127 | 22929 |
| AVO25693.1 | MG962372_p87 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49544 | 49744 |
| AVO25619.1 | MG962372_p10 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 6718 | 7032 |
| AVO25625.1 | MG962372_p16 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12722 | 12958 |
| AVO25678.1 | MG962372_p71 | exonuclease | singleton | unknown function | unknown function | -1 | 44167 | 44271 |
| AVO25645.1 | MG962372_p37 | integrase | phrog_95 | integrase | integration and excision | 1 | 29330 | 30922 |
| AVO25620.1 | MG962372_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7052 | 8740 |
| AVO25660.1 | MG962372_p52 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 36784 | 37551 |
| AVO25673.1 | MG962372_p66 | helix-turn-helix DNA binding domain protein | phrog_2184 | unknown function | unknown function | -1 | 41687 | 42007 |
| AVO25623.1 | MG962372_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11116 | 11628 |
| AVO25639.1 | MG962372_p31 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24126 | 25979 |
| AVO25652.1 | MG962372_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32553 | 34382 |
| AVO25698.1 | MG962372_p92 | hypothetical protein | phrog_11359 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 50953 | 51177 |
| AVO25668.1 | MG962372_p61 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 40079 | 40165 |
| AVO25696.1 | MG962372_p90 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 50267 | 50596 |
| AVO25628.1 | MG962372_p19 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13769 | 14164 |
| AVO25686.1 | MG962372_p79 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46736 | 46903 |
| AVO25643.1 | MG962372_p35 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28061 | 28864 |
| AVO25638.1 | MG962372_p30 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 23754 | 24101 |
| AVO25654.1 | MG962372_p46 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34545 | 34775 |
| AVO25700.1 | MG962372_p82 | hypothetical protein | phrog_15035 | unknown function | unknown function | -1 | 47234 | 47428 |
| AVO25680.1 | MG962372_p73 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 44575 | 44979 |
| AVO25658.1 | MG962372_p50 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35855 | 36646 |
| AVO25612.1 | MG962372_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1080 | 1514 |
| AVO25665.1 | MG962372_p58 | hypothetical protein | phrog_11567 | unknown function | unknown function | -1 | 39312 | 39488 |
| AVO25670.1 | MG962372_p63 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40458 | 41267 |
| AVO25674.1 | MG962372_p67 | helix-turn-helix DNA binding domain protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42011 | 42193 |
| AVO25633.1 | MG962372_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18891 | 20948 |
| AVO25629.1 | MG962372_p20 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 14168 | 14614 |
| AVO25688.1 | MG962372_p81 | hypothetical protein | phrog_9026 | unknown function | unknown function | -1 | 47025 | 47237 |
| AVO25637.1 | MG962372_p29 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23425 | 23757 |
| AVO25627.1 | MG962372_p18 | head-to-tail connector complex protein | phrog_320 | head closure Hc1 | connector | 1 | 13407 | 13769 |
| AVO25647.1 | MG962372_p39 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31314 | 31484 |
| AVO25692.1 | MG962372_p86 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 49092 | 49376 |
| AVO25685.1 | MG962372_p78 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 46548 | 46736 |
| AVO25610.1 | MG962372_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 600 | 752 |
| AVO25613.1 | MG962372_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2000 | 3070 |
| AVO25624.1 | MG962372_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11638 | 12636 |
| AVO25666.1 | MG962372_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39485 | 39619 |
| AVO25653.1 | MG962372_p45 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 34423 | 34548 |
| AVO25630.1 | MG962372_p21 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14623 | 15471 |
| AVO25699.1 | MG962372_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15578 | 15955 |
| AVO25691.1 | MG962372_p85 | hypothetical protein | phrog_4958 | unknown function | unknown function | -1 | 48756 | 49040 |
| AVO25615.1 | MG962372_p6 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3780 | 4040 |
| AVO25631.1 | MG962372_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15578 | 16377 |
| AVO25618.1 | MG962372_p9 | lysin B | phrog_102 | endolysin | lysis | 1 | 5728 | 6696 |
| AVO25644.1 | MG962372_p36 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 28985 | 29269 |
| AVO25663.1 | MG962372_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38287 | 38808 |
| AVO25621.1 | MG962372_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8737 | 10179 |
| AVO25667.1 | MG962372_p60 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39616 | 40092 |
| AVO25661.1 | MG962372_p53 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37548 | 37727 |
| AVO25649.1 | MG962372_p41 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31573 | 31890 |
| AVO25646.1 | MG962372_p38 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31045 | 31317 |
| AVO25687.1 | MG962372_p80 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 46900 | 47028 |
| AVO25669.1 | MG962372_p62 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40162 | 40458 |
| AVO25682.1 | MG962372_p75 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45786 | 46085 |
| AVO25677.1 | MG962372_p70 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 43596 | 44174 |
| AVO25683.1 | MG962372_p76 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 46082 | 46351 |
| AVO25656.1 | MG962372_p48 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 35347 | 35679 |
| AVO25676.1 | MG962372_p69 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42842 | 43576 |
| AVO25642.1 | MG962372_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27873 | 28064 |
| AVO25632.1 | MG962372_p24 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16390 | 18867 |
| AVO25622.1 | MG962372_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10176 | 11057 |
| AVO25626.1 | MG962372_p17 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12958 | 13407 |
| AVO25657.1 | MG962372_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35652 | 35858 |
| AVO25614.1 | MG962372_p5 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3080 | 3769 |
| AVO25672.1 | MG962372_p65 | helix-turn-helix DNA binding domain protein | phrog_520 | unknown function | unknown function | -1 | 41397 | 41690 |
| AVO25679.1 | MG962372_p72 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 44264 | 44578 |
| AVO25675.1 | MG962372_p68 | DNA methylase | phrog_111 | DNA methyltransferase | other | -1 | 42238 | 42765 |
| AVO25651.1 | MG962372_p43 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32174 | 32527 |
| AVO25689.1 | MG962372_p83 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 47453 | 47605 |
| AVO25697.1 | MG962372_p91 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 50695 | 50898 |
| AVO25671.1 | MG962372_p64 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 41254 | 41400 |
| AVO25694.1 | MG962372_p88 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 49741 | 50094 |
| AVO25634.1 | MG962372_p26 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 20945 | 21127 |
| AVO25664.1 | MG962372_p57 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39148 | 39312 |
| AVO25701.1 | MG962372_p56 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38654 | 39169 |
| AVO25695.1 | MG962372_p89 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 50091 | 50189 |
| AVO25655.1 | MG962372_p47 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34818 | 35312 |
| AVO25617.1 | MG962372_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4305 | 5738 |