Genomic map of Mycobacterium phage Thumb (MG962376)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG962376
Definition
Mycobacterium phage Thumb, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
68408
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
57.5
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO25989.1 MG962376_p9 hypothetical protein phrog_16007 unknown function unknown function 1 6443 6739
AVO26061.1 MG962376_p85 hypothetical protein phrog_15815 unknown function unknown function 1 61370 61945
AVO26007.1 MG962376_p29 minor tail protein phrog_346 minor tail protein tail 1 25682 28525
AVO26071.1 MG962376_p5 portal protein phrog_64 portal protein head and packaging 1 3872 5485
AVO26010.1 MG962376_p32 hypothetical protein phrog_644 unknown function unknown function 1 30709 31116
AVO26057.1 MG962376_p81 hypothetical protein phrog_16155 unknown function unknown function 1 60231 60482
AVO26032.1 MG962376_p55 hypothetical protein phrog_5326 unknown function unknown function 1 44032 44208
AVO26046.1 MG962376_p69 hypothetical protein phrog_21624 unknown function unknown function 1 51401 51715
AVO26043.1 MG962376_p66 hypothetical protein phrog_18821 unknown function unknown function 1 49646 49774
AVO26052.1 MG962376_p75 hypothetical protein phrog_15802 unknown function unknown function 1 54574 54801
AVO26006.1 MG962376_p28 minor tail protein phrog_1885 minor tail protein tail 1 24054 25682
AVO26077.1 MG962376_p78 DNA polymerase III alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 55518 58814
AVO26003.1 MG962376_p25 tail assembly chaperone phrog_6778 tail assembly chaperone tail 1 15866 16216
AVO26072.1 MG962376_p6 hypothetical protein phrog_25887 unknown function unknown function 1 5485 5655
AVO26068.1 MG962376_p92 hypothetical protein phrog_18975 unknown function unknown function 1 64314 64688
AVO25990.1 MG962376_p10 capsid maturation protease phrog_12708 head maturation protease head and packaging 1 6736 7509
AVO26050.1 MG962376_p73 AAA-ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 52573 53652
AVO25993.1 MG962376_p13 hypothetical protein phrog_4866 head scaffolding protein head and packaging 1 8914 9675
AVO26076.1 MG962376_p40 hypothetical protein singleton unknown function unknown function 1 35548 35808
AVO26017.1 MG962376_p39 hypothetical protein phrog_10981 unknown function unknown function 1 35086 35448
AVO25998.1 MG962376_p20 hypothetical protein phrog_4995 unknown function unknown function 1 13361 13819
AVO25985.1 MG962376_p2 hypothetical protein phrog_10899 terminase small subunit head and packaging 1 355 1668
AVO26020.1 MG962376_p43 hypothetical protein phrog_16702 unknown function unknown function 1 38113 38472
AVO26058.1 MG962376_p82 membrane protein phrog_19237 membrane protein moron, auxiliary metabolic gene and host takeover 1 60479 60775
AVO26009.1 MG962376_p31 minor tail protein phrog_553 minor tail protein tail 1 29730 30695
AVO26030.1 MG962376_p53 hypothetical protein phrog_18114 unknown function unknown function 1 42138 42572
AVO26070.1 MG962376_p94 hypothetical protein phrog_26497 polymerase DNA, RNA and nucleotide metabolism 1 67611 67841
AVO26014.1 MG962376_p36 membrane protein phrog_1298 minor tail protein tail 1 32873 33352
AVO26056.1 MG962376_p80 hypothetical protein phrog_1981 unknown function unknown function 1 59431 60135
AVO26028.1 MG962376_p51 hypothetical protein phrog_16414 unknown function unknown function 1 41448 41774
AVO26036.1 MG962376_p59 hypothetical protein phrog_14477 helicase DNA, RNA and nucleotide metabolism 1 44948 45178
AVO25995.1 MG962376_p15 major capsid protein phrog_3990 major head protein head and packaging 1 10336 11559
AVO26027.1 MG962376_p50 hypothetical protein phrog_17421 unknown function unknown function 1 40924 41310
AVO26066.1 MG962376_p90 hypothetical protein phrog_18727 unknown function unknown function 1 63695 64042
AVO25994.1 MG962376_p14 hypothetical protein phrog_5042 unknown function unknown function 1 9779 10285
AVO26012.1 MG962376_p34 lysin A phrog_1512 endolysin lysis 1 31403 32368
AVO26054.1 MG962376_p77 hypothetical protein phrog_1342 unknown function unknown function 1 55088 55489
AVO26065.1 MG962376_p89 hypothetical protein phrog_17566 unknown function unknown function 1 63273 63677
AVO26062.1 MG962376_p86 hypothetical protein phrog_3848 unknown function unknown function 1 61951 62319
AVO26049.1 MG962376_p72 membrane protein phrog_549 unknown function unknown function 1 52173 52541
AVO26055.1 MG962376_p79 hypothetical protein phrog_17115 unknown function unknown function 1 58826 59434
AVO26048.1 MG962376_p71 membrane protein phrog_20994 membrane protein moron, auxiliary metabolic gene and host takeover 1 51867 52130
AVO25984.1 MG962376_p1 hypothetical protein phrog_5460 unknown function unknown function 1 1 348
AVO26008.1 MG962376_p30 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 28525 29733
AVO26022.1 MG962376_p45 hypothetical protein phrog_12994 unknown function unknown function 1 38998 39276
AVO26039.1 MG962376_p62 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 46085 48142
AVO26001.1 MG962376_p23 major tail protein phrog_4971 major tail protein tail 1 14426 15274
AVO26013.1 MG962376_p35 holin phrog_565 holin lysis 1 32380 32841
AVO26073.1 MG962376_p7 hypothetical protein phrog_1375 unknown function unknown function 1 5717 5917
AVO25986.1 MG962376_p3 hypothetical protein phrog_12672 unknown function unknown function 1 1682 1930
AVO26044.1 MG962376_p67 hypothetical protein phrog_18085 unknown function unknown function 1 49771 50118
AVO26069.1 MG962376_p93 DNA primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 64678 67614
AVO26002.1 MG962376_p24 tail assembly chaperone phrog_4336 tail assembly chaperone tail 1 15370 15915
AVO26033.1 MG962376_p56 membrane protein phrog_19761 membrane protein moron, auxiliary metabolic gene and host takeover 1 44205 44405
AVO26024.1 MG962376_p47 hypothetical protein phrog_21012 unknown function unknown function 1 39854 40039
AVO26059.1 MG962376_p83 hypothetical protein phrog_17654 unknown function unknown function 1 60772 61101
AVO26040.1 MG962376_p63 hypothetical protein phrog_13855 unknown function unknown function 1 48139 48408
AVO26005.1 MG962376_p27 minor tail protein phrog_7161 minor tail protein tail 1 22555 24057
AVO26025.1 MG962376_p48 hypothetical protein phrog_1587 unknown function unknown function 1 40133 40468
AVO26016.1 MG962376_p38 lysin B phrog_102 endolysin lysis 1 33835 35076
AVO26018.1 MG962376_p41 hypothetical protein phrog_636 unknown function unknown function 1 37003 37635
AVO26031.1 MG962376_p54 hypothetical protein phrog_1221 unknown function unknown function 1 42720 43931
AVO26051.1 MG962376_p74 hypothetical protein phrog_12070 unknown function unknown function 1 53733 54350
AVO26021.1 MG962376_p44 hypothetical protein phrog_19599 unknown function unknown function 1 38618 39001
AVO26038.1 MG962376_p61 hypothetical protein phrog_5307 unknown function unknown function 1 45491 46057
AVO26015.1 MG962376_p37 membrane domain protein phrog_726 unknown function unknown function 1 33336 33851
AVO25996.1 MG962376_p16 hypothetical protein phrog_5318 unknown function unknown function 1 11629 12240
AVO25999.1 MG962376_p21 hypothetical protein phrog_12447 unknown function unknown function 1 13867 14193
AVO26045.1 MG962376_p68 exonuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 50115 51404
AVO26004.1 MG962376_p26 tapemeasure protein phrog_6435 tail length tape measure protein tail 1 16235 22558
AVO26075.1 MG962376_p19 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 13002 13364
AVO25997.1 MG962376_p18 hypothetical protein phrog_4904 unknown function unknown function 1 12626 13009
AVO26067.1 MG962376_p91 hypothetical protein phrog_30302 unknown function unknown function 1 64234 64359
AVO26042.1 MG962376_p65 hypothetical protein phrog_12020 unknown function unknown function 1 48923 49468
AVO26037.1 MG962376_p60 hypothetical protein phrog_12472 unknown function unknown function 1 45183 45494
AVO26026.1 MG962376_p49 hypothetical protein phrog_21085 unknown function unknown function 1 40471 40827
AVO26041.1 MG962376_p64 membrane protein phrog_17402 membrane protein moron, auxiliary metabolic gene and host takeover 1 48405 48776
AVO25991.1 MG962376_p11 peptidase phrog_5556 tail protein tail 1 7513 7971
AVO26019.1 MG962376_p42 hypothetical protein phrog_8253 unknown function unknown function 1 37751 38020
AVO26011.1 MG962376_p33 hypothetical protein phrog_12784 unknown function unknown function 1 31133 31333
AVO26023.1 MG962376_p46 hypothetical protein phrog_19432 unknown function unknown function 1 39374 39769
AVO25988.1 MG962376_p8 membrane protein phrog_19343 membrane protein moron, auxiliary metabolic gene and host takeover 1 6111 6443
AVO26060.1 MG962376_p84 hypothetical protein phrog_14975 unknown function unknown function 1 61098 61373
AVO26000.1 MG962376_p22 hypothetical protein phrog_5278 unknown function unknown function 1 14213 14410
AVO26053.1 MG962376_p76 hypothetical protein phrog_15225 unknown function unknown function 1 54798 55091
AVO26064.1 MG962376_p88 hypothetical protein phrog_17433 unknown function unknown function 1 62971 63276
AVO26034.1 MG962376_p57 hypothetical protein phrog_7933 unknown function unknown function 1 44402 44632
AVO26047.1 MG962376_p70 hypothetical protein phrog_19475 unknown function unknown function 1 51712 51870
AVO26035.1 MG962376_p58 membrane protein phrog_36341 unknown function unknown function 1 44823 44963
AVO26029.1 MG962376_p52 hypothetical protein phrog_17169 unknown function unknown function 1 41812 42135
AVO25992.1 MG962376_p12 minor capsid protein phrog_115 minor head protein head and packaging 1 7968 8888
AVO25987.1 MG962376_p4 terminase phrog_2 terminase large subunit head and packaging 1 2133 3842
AVO26063.1 MG962376_p87 hypothetical protein phrog_16806 unknown function unknown function 1 62321 62986
AVO26074.1 MG962376_p17 hypothetical protein phrog_5274 unknown function unknown function 1 12253 12624