Genomic map of Mycobacterium phage Fascinus (MH000606)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH000606
Definition
Mycobacterium phage Fascinus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52157
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
63.7
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO23490.1 MH000606_p83 hypothetical protein phrog_3414 unknown function unknown function -1 50362 50646
AVO23458.1 MH000606_p50 hypothetical protein phrog_5618 unknown function unknown function -1 37453 37779
AVO23433.1 MH000606_p25 hypothetical protein phrog_1543 minor tail protein tail 1 20776 20958
AVO23475.1 MH000606_p68 hypothetical protein phrog_5947 unknown function unknown function -1 45444 45608
AVO23447.1 MH000606_p39 hypothetical protein singleton unknown function unknown function -1 31391 31720
AVO23413.1 MH000606_p5 hypothetical protein phrog_553 minor tail protein tail 1 3104 3796
AVO23468.1 MH000606_p61 hypothetical protein phrog_520 unknown function unknown function -1 42056 42349
AVO23474.1 MH000606_p67 hypothetical protein phrog_4604 unknown function unknown function -1 44876 45337
AVO23434.1 MH000606_p26 minor tail protein phrog_110 minor tail protein tail 1 20958 22760
AVO23422.1 MH000606_p14 major capsid protein phrog_10 major head protein head and packaging 1 11332 12333
AVO23486.1 MH000606_p79 hypothetical protein phrog_2974 unknown function unknown function -1 48712 48933
AVO23461.1 MH000606_p54 hypothetical protein phrog_397 unknown function unknown function -1 39725 39859
AVO23487.1 MH000606_p80 hypothetical protein phrog_932 unknown function unknown function -1 48959 49111
AVO23484.1 MH000606_p77 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48244 48411
AVO23442.1 MH000606_p34 hypothetical protein phrog_1560 unknown function unknown function 1 27789 28001
AVO23439.1 MH000606_p31 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 25757 26902
AVO23467.1 MH000606_p60 hypothetical protein phrog_780 unknown function unknown function -1 41790 42059
AVO23457.1 MH000606_p49 hypothetical protein phrog_1167 phosphofructokinase other -1 36887 37456
AVO23430.1 MH000606_p21 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15286 16085
AVO23471.1 MH000606_p64 hypothetical protein phrog_5961 unknown function unknown function -1 42840 42998
AVO23481.1 MH000606_p74 hypothetical protein phrog_6510 unknown function unknown function -1 47680 47862
AVO23451.1 MH000606_p43 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34276 34815
AVO23445.1 MH000606_p37 hypothetical protein phrog_1966 unknown function unknown function -1 30587 30859
AVO23426.1 MH000606_p18 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13459 13854
AVO23473.1 MH000606_p66 hypothetical protein phrog_4285 transposase integration and excision -1 43827 44537
AVO23435.1 MH000606_p27 hypothetical protein phrog_352 minor tail protein tail 1 22799 23245
AVO23470.1 MH000606_p63 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42661 42843
AVO23494.1 MH000606_p52 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39175 39591
AVO23478.1 MH000606_p71 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46344 46856
AVO23418.1 MH000606_p10 terminase phrog_9 terminase large subunit head and packaging 1 6746 8434
AVO23441.1 MH000606_p33 hypothetical protein phrog_644 unknown function unknown function 1 27453 27779
AVO23460.1 MH000606_p53 hypothetical protein phrog_1783 unknown function unknown function -1 39570 39728
AVO23450.1 MH000606_p42 hypothetical protein phrog_1781 unknown function unknown function -1 34015 34245
AVO23432.1 MH000606_p24 minor tail protein phrog_106 minor tail protein tail 1 18700 20757
AVO23477.1 MH000606_p70 hypothetical protein phrog_1809 unknown function unknown function -1 45907 46302
AVO23464.1 MH000606_p57 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40668 41489
AVO23469.1 MH000606_p62 hypothetical protein phrog_2184 unknown function unknown function -1 42346 42657
AVO23438.1 MH000606_p30 minor tail protein phrog_346 minor tail protein tail 1 23911 25764
AVO23412.1 MH000606_p4 hypothetical protein phrog_1197 tail protein tail 1 2015 3085
AVO23410.1 MH000606_p2 hypothetical protein phrog_226 minor tail protein tail 1 931 1371
AVO23440.1 MH000606_p32 hypothetical protein phrog_16290 minor tail protein tail 1 26947 27366
AVO23417.1 MH000606_p9 lysin B phrog_102 endolysin lysis 1 5758 6726
AVO23453.1 MH000606_p45 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 34991 35806
AVO23414.1 MH000606_p6 hypothetical protein phrog_1718 tail protein tail 1 3810 4070
AVO23482.1 MH000606_p75 hypothetical protein phrog_1387 unknown function unknown function -1 47859 48059
AVO23488.1 MH000606_p81 hypothetical protein phrog_9026 unknown function unknown function -1 49108 49320
AVO23493.1 MH000606_p86 hypothetical protein phrog_828 unknown function unknown function -1 51558 51761
AVO23444.1 MH000606_p36 integrase phrog_95 integrase integration and excision 1 28964 30466
AVO23411.1 MH000606_p3 hypothetical protein phrog_2830 unknown function unknown function 1 1543 1773
AVO23437.1 MH000606_p29 hypothetical protein phrog_1397 unknown function unknown function 1 23592 23885
AVO23492.1 MH000606_p85 hypothetical protein singleton unknown function unknown function -1 51014 51466
AVO23462.1 MH000606_p55 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39856 40332
AVO23454.1 MH000606_p46 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 35799 35939
AVO23436.1 MH000606_p28 hypothetical protein phrog_981 minor tail protein tail 1 23242 23589
AVO23424.1 MH000606_p16 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12648 13097
AVO23476.1 MH000606_p69 hypothetical protein phrog_1584 unknown function unknown function -1 45605 45910
AVO23463.1 MH000606_p56 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40402 40671
AVO23448.1 MH000606_p40 hypothetical protein phrog_383 unknown function unknown function -1 31773 32129
AVO23409.1 MH000606_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 599 895
AVO23416.1 MH000606_p8 lysin A phrog_317 endolysin lysis 1 4335 5768
AVO23428.1 MH000606_p20 major tail protein phrog_117 major tail protein tail 1 14313 15164
AVO23485.1 MH000606_p78 hypothetical protein phrog_2093 unknown function unknown function -1 48408 48698
AVO23491.1 MH000606_p84 hypothetical protein phrog_1387 unknown function unknown function -1 50814 51014
AVO23466.1 MH000606_p59 hypothetical protein phrog_1705 unknown function unknown function -1 41662 41793
AVO23452.1 MH000606_p44 hypothetical protein phrog_499 unknown function unknown function -1 34812 34994
AVO23446.1 MH000606_p38 hypothetical protein phrog_2387 nucleotide kinase other -1 30856 31341
AVO23425.1 MH000606_p17 hypothetical protein phrog_320 head closure Hc1 connector 1 13097 13459
AVO23443.1 MH000606_p35 hypothetical protein phrog_553 minor tail protein tail 1 28001 28687
AVO23465.1 MH000606_p58 hypothetical protein phrog_2507 unknown function unknown function -1 41489 41665
AVO23420.1 MH000606_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9870 10751
AVO23431.1 MH000606_p23 tape measure protein phrog_305 tail length tape measure protein tail 1 16097 18676
AVO23429.1 MH000606_p22 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15286 15663
AVO23480.1 MH000606_p73 hypothetical protein phrog_1720 unknown function unknown function -1 47414 47683
AVO23483.1 MH000606_p76 hypothetical protein phrog_1155 unknown function unknown function -1 48056 48244
AVO23415.1 MH000606_p7 hypothetical protein phrog_747 unknown function unknown function 1 4078 4335
AVO23456.1 MH000606_p48 hypothetical protein phrog_1503 unknown function unknown function -1 36708 36890
AVO23455.1 MH000606_p47 hypothetical protein phrog_221 metallo-phosphoesterase other -1 35944 36711
AVO23427.1 MH000606_p19 hypothetical protein phrog_123 tail terminator connector 1 13858 14304
AVO23472.1 MH000606_p65 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43027 43830
AVO23479.1 MH000606_p72 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47118 47417
AVO23423.1 MH000606_p15 hypothetical protein phrog_1857 head-tail connector protein connector 1 12412 12648
AVO23419.1 MH000606_p11 portal protein phrog_104 portal protein head and packaging 1 8431 9873
AVO23459.1 MH000606_p51 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37776 39299
AVO23489.1 MH000606_p82 DNA methylase phrog_363 DNA methyltransferase other -1 49620 50318
AVO23421.1 MH000606_p13 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10810 11322
AVO23449.1 MH000606_p41 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32152 33978