| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH000606 |
Definition |
Mycobacterium phage Fascinus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52157 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
63.7 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO23490.1 | MH000606_p83 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 50362 | 50646 |
| AVO23458.1 | MH000606_p50 | hypothetical protein | phrog_5618 | unknown function | unknown function | -1 | 37453 | 37779 |
| AVO23433.1 | MH000606_p25 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 20776 | 20958 |
| AVO23475.1 | MH000606_p68 | hypothetical protein | phrog_5947 | unknown function | unknown function | -1 | 45444 | 45608 |
| AVO23447.1 | MH000606_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31391 | 31720 |
| AVO23413.1 | MH000606_p5 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3104 | 3796 |
| AVO23468.1 | MH000606_p61 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42056 | 42349 |
| AVO23474.1 | MH000606_p67 | hypothetical protein | phrog_4604 | unknown function | unknown function | -1 | 44876 | 45337 |
| AVO23434.1 | MH000606_p26 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20958 | 22760 |
| AVO23422.1 | MH000606_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11332 | 12333 |
| AVO23486.1 | MH000606_p79 | hypothetical protein | phrog_2974 | unknown function | unknown function | -1 | 48712 | 48933 |
| AVO23461.1 | MH000606_p54 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39725 | 39859 |
| AVO23487.1 | MH000606_p80 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 48959 | 49111 |
| AVO23484.1 | MH000606_p77 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48244 | 48411 |
| AVO23442.1 | MH000606_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27789 | 28001 |
| AVO23439.1 | MH000606_p31 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25757 | 26902 |
| AVO23467.1 | MH000606_p60 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 41790 | 42059 |
| AVO23457.1 | MH000606_p49 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 36887 | 37456 |
| AVO23430.1 | MH000606_p21 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15286 | 16085 |
| AVO23471.1 | MH000606_p64 | hypothetical protein | phrog_5961 | unknown function | unknown function | -1 | 42840 | 42998 |
| AVO23481.1 | MH000606_p74 | hypothetical protein | phrog_6510 | unknown function | unknown function | -1 | 47680 | 47862 |
| AVO23451.1 | MH000606_p43 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34276 | 34815 |
| AVO23445.1 | MH000606_p37 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 30587 | 30859 |
| AVO23426.1 | MH000606_p18 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13459 | 13854 |
| AVO23473.1 | MH000606_p66 | hypothetical protein | phrog_4285 | transposase | integration and excision | -1 | 43827 | 44537 |
| AVO23435.1 | MH000606_p27 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 22799 | 23245 |
| AVO23470.1 | MH000606_p63 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42661 | 42843 |
| AVO23494.1 | MH000606_p52 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39175 | 39591 |
| AVO23478.1 | MH000606_p71 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 46344 | 46856 |
| AVO23418.1 | MH000606_p10 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 6746 | 8434 |
| AVO23441.1 | MH000606_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27453 | 27779 |
| AVO23460.1 | MH000606_p53 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39570 | 39728 |
| AVO23450.1 | MH000606_p42 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34015 | 34245 |
| AVO23432.1 | MH000606_p24 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18700 | 20757 |
| AVO23477.1 | MH000606_p70 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 45907 | 46302 |
| AVO23464.1 | MH000606_p57 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40668 | 41489 |
| AVO23469.1 | MH000606_p62 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 42346 | 42657 |
| AVO23438.1 | MH000606_p30 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23911 | 25764 |
| AVO23412.1 | MH000606_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2015 | 3085 |
| AVO23410.1 | MH000606_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 931 | 1371 |
| AVO23440.1 | MH000606_p32 | hypothetical protein | phrog_16290 | minor tail protein | tail | 1 | 26947 | 27366 |
| AVO23417.1 | MH000606_p9 | lysin B | phrog_102 | endolysin | lysis | 1 | 5758 | 6726 |
| AVO23453.1 | MH000606_p45 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 34991 | 35806 |
| AVO23414.1 | MH000606_p6 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3810 | 4070 |
| AVO23482.1 | MH000606_p75 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 47859 | 48059 |
| AVO23488.1 | MH000606_p81 | hypothetical protein | phrog_9026 | unknown function | unknown function | -1 | 49108 | 49320 |
| AVO23493.1 | MH000606_p86 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 51558 | 51761 |
| AVO23444.1 | MH000606_p36 | integrase | phrog_95 | integrase | integration and excision | 1 | 28964 | 30466 |
| AVO23411.1 | MH000606_p3 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1543 | 1773 |
| AVO23437.1 | MH000606_p29 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 23592 | 23885 |
| AVO23492.1 | MH000606_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51014 | 51466 |
| AVO23462.1 | MH000606_p55 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39856 | 40332 |
| AVO23454.1 | MH000606_p46 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35799 | 35939 |
| AVO23436.1 | MH000606_p28 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23242 | 23589 |
| AVO23424.1 | MH000606_p16 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12648 | 13097 |
| AVO23476.1 | MH000606_p69 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 45605 | 45910 |
| AVO23463.1 | MH000606_p56 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40402 | 40671 |
| AVO23448.1 | MH000606_p40 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 31773 | 32129 |
| AVO23409.1 | MH000606_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 599 | 895 |
| AVO23416.1 | MH000606_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4335 | 5768 |
| AVO23428.1 | MH000606_p20 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14313 | 15164 |
| AVO23485.1 | MH000606_p78 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 48408 | 48698 |
| AVO23491.1 | MH000606_p84 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 50814 | 51014 |
| AVO23466.1 | MH000606_p59 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 41662 | 41793 |
| AVO23452.1 | MH000606_p44 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34812 | 34994 |
| AVO23446.1 | MH000606_p38 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 30856 | 31341 |
| AVO23425.1 | MH000606_p17 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13097 | 13459 |
| AVO23443.1 | MH000606_p35 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 28001 | 28687 |
| AVO23465.1 | MH000606_p58 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 41489 | 41665 |
| AVO23420.1 | MH000606_p12 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9870 | 10751 |
| AVO23431.1 | MH000606_p23 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16097 | 18676 |
| AVO23429.1 | MH000606_p22 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15286 | 15663 |
| AVO23480.1 | MH000606_p73 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 47414 | 47683 |
| AVO23483.1 | MH000606_p76 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 48056 | 48244 |
| AVO23415.1 | MH000606_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4078 | 4335 |
| AVO23456.1 | MH000606_p48 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 36708 | 36890 |
| AVO23455.1 | MH000606_p47 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | -1 | 35944 | 36711 |
| AVO23427.1 | MH000606_p19 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 13858 | 14304 |
| AVO23472.1 | MH000606_p65 | RecB-like exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43027 | 43830 |
| AVO23479.1 | MH000606_p72 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47118 | 47417 |
| AVO23423.1 | MH000606_p15 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12412 | 12648 |
| AVO23419.1 | MH000606_p11 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8431 | 9873 |
| AVO23459.1 | MH000606_p51 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37776 | 39299 |
| AVO23489.1 | MH000606_p82 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 49620 | 50318 |
| AVO23421.1 | MH000606_p13 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10810 | 11322 |
| AVO23449.1 | MH000606_p41 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32152 | 33978 |