| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH000607 |
Definition |
Mycobacterium phage RiverMonster, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
75565 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
144 |
%GC |
63.05 |
Number of singletons |
3 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO23638.1 | MH000607_p123 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68464 | 68598 |
| AVO23570.1 | MH000607_p78 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48955 | 49191 |
| AVO23577.1 | MH000607_p88 | hypothetical protein | phrog_505 | polynucleotide kinase | other | 1 | 53123 | 54070 |
| AVO23558.1 | MH000607_p64 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43257 | 43385 |
| AVO23632.1 | MH000607_p105 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62420 | 62710 |
| AVO23510.1 | MH000607_p16 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 9802 | 10191 |
| AVO23567.1 | MH000607_p74 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47832 | 48011 |
| AVO23521.1 | MH000607_p27 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24432 | 27272 |
| AVO23501.1 | MH000607_p7 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1921 | 2229 |
| AVO23595.1 | MH000607_p117 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67203 | 67664 |
| AVO23495.1 | MH000607_p1 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 267 | 560 |
| AVO23539.1 | MH000607_p45 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 35444 | 35617 |
| AVO23502.1 | MH000607_p8 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 2274 | 3944 |
| AVO23497.1 | MH000607_p3 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 739 | 1029 |
| AVO23508.1 | MH000607_p14 | head-to-tail connector complex protein | phrog_442 | head-tail adaptor | connector | 1 | 8898 | 9464 |
| AVO23620.1 | MH000607_p73 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 47458 | 47832 |
| AVO23563.1 | MH000607_p69 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45591 | 46319 |
| AVO23516.1 | MH000607_p22 | tape measure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13092 | 17822 |
| AVO23552.1 | MH000607_p61 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41731 | 42009 |
| AVO23628.1 | MH000607_p99 | RNA ligase | phrog_67 | DNA methyltransferase | other | 1 | 58856 | 60079 |
| AVO23525.1 | MH000607_p31 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29038 | 29322 |
| AVO23581.1 | MH000607_p92 | hypothetical protein | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54901 | 56226 |
| AVO23543.1 | MH000607_p50 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 36369 | 36515 |
| AVO23549.1 | MH000607_p58 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40607 | 40744 |
| AVO23566.1 | MH000607_p72 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47093 | 47461 |
| AVO23500.1 | MH000607_p6 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1682 | 1906 |
| AVO23605.1 | MH000607_p129 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70432 | 70890 |
| AVO23524.1 | MH000607_p30 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28720 | 28905 |
| AVO23590.1 | MH000607_p112 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 65558 | 66520 |
| AVO23573.1 | MH000607_p81 | DnaB-like DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50160 | 51422 |
| AVO23574.1 | MH000607_p82 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51419 | 51607 |
| AVO23596.1 | MH000607_p118 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67661 | 67828 |
| AVO23599.1 | MH000607_p122 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68322 | 68453 |
| AVO23532.1 | MH000607_p38 | DNA binding protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33315 | 33701 |
| AVO23542.1 | MH000607_p49 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36135 | 36350 |
| AVO23534.1 | MH000607_p40 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 33943 | 34407 |
| AVO23565.1 | MH000607_p71 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46623 | 47093 |
| AVO23560.1 | MH000607_p66 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 43903 | 44232 |
| AVO23637.1 | MH000607_p144 | hypothetical protein | phrog_589 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 74984 | 75331 |
| AVO23557.1 | MH000607_p63 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42992 | 43291 |
| AVO23582.1 | MH000607_p94 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 57081 | 57341 |
| AVO23514.1 | MH000607_p20 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 12228 | 12689 |
| AVO23568.1 | MH000607_p76 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 48238 | 48651 |
| AVO23618.1 | MH000607_p142 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74351 | 74698 |
| AVO23541.1 | MH000607_p47 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35742 | 35909 |
| AVO23606.1 | MH000607_p130 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 70905 | 71234 |
| AVO23571.1 | MH000607_p79 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49188 | 49838 |
| AVO23518.1 | MH000607_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19585 | 21180 |
| AVO23496.1 | MH000607_p2 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 557 | 742 |
| AVO23619.1 | MH000607_p143 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 74773 | 74994 |
| AVO23615.1 | MH000607_p139 | hypothetical protein | phrog_7581 | unknown function | unknown function | -1 | 73645 | 73848 |
| AVO23587.1 | MH000607_p109 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 64036 | 64515 |
| AVO23576.1 | MH000607_p86 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52415 | 52777 |
| AVO23633.1 | MH000607_p106 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 63092 | 63388 |
| AVO23592.1 | MH000607_p114 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 66641 | 66814 |
| AVO23499.1 | MH000607_p5 | hypothetical protein | phrog_83 | terminase small subunit | head and packaging | 1 | 1149 | 1610 |
| AVO23523.1 | MH000607_p29 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28305 | 28733 |
| AVO23506.1 | MH000607_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7103 | 8596 |
| AVO23631.1 | MH000607_p104 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 61990 | 62367 |
| AVO23562.1 | MH000607_p68 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45194 | 45604 |
| AVO23583.1 | MH000607_p96 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57513 | 57983 |
| AVO23544.1 | MH000607_p51 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36515 | 36910 |
| AVO23533.1 | MH000607_p39 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 33749 | 33946 |
| AVO23610.1 | MH000607_p134 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 71926 | 72438 |
| AVO23636.1 | MH000607_p120 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 68009 | 68146 |
| AVO23507.1 | MH000607_p13 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 8719 | 8898 |
| AVO23559.1 | MH000607_p65 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 43574 | 43906 |
| AVO23537.1 | MH000607_p43 | hypothetical protein | phrog_3447 | unknown function | unknown function | -1 | 34834 | 35046 |
| AVO23498.1 | MH000607_p4 | hypothetical protein | phrog_8426 | unknown function | unknown function | 1 | 1007 | 1156 |
| AVO23616.1 | MH000607_p140 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 73854 | 74051 |
| AVO23512.1 | MH000607_p18 | major tail protein | phrog_476 | major tail protein | tail | 1 | 10600 | 11574 |
| AVO23630.1 | MH000607_p102 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 61335 | 61760 |
| AVO23617.1 | MH000607_p141 | hypothetical protein | phrog_34224 | unknown function | unknown function | -1 | 74056 | 74322 |
| AVO23540.1 | MH000607_p46 | hypothetical protein | phrog_4396 | unknown function | unknown function | -1 | 35614 | 35742 |
| AVO23607.1 | MH000607_p131 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 71236 | 71553 |
| AVO23589.1 | MH000607_p111 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65308 | 65550 |
| AVO23505.1 | MH000607_p11 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 5723 | 7015 |
| AVO23601.1 | MH000607_p125 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69237 | 69626 |
| AVO23531.1 | MH000607_p37 | NrdH-like glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 32890 | 33135 |
| AVO23603.1 | MH000607_p127 | hypothetical protein | phrog_8201 | unknown function | unknown function | -1 | 69996 | 70070 |
| AVO23594.1 | MH000607_p116 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 67000 | 67254 |
| AVO23634.1 | MH000607_p107 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 63385 | 63648 |
| AVO23635.1 | MH000607_p108 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 63605 | 64033 |
| AVO23611.1 | MH000607_p135 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 72478 | 72873 |
| AVO23585.1 | MH000607_p100 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60072 | 60512 |
| AVO23504.1 | MH000607_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4164 | 5720 |
| AVO23579.1 | MH000607_p90 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 54513 | 54635 |
| AVO23623.1 | MH000607_p85 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 52005 | 52418 |
| AVO23624.1 | MH000607_p87 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52582 | 52968 |
| AVO23517.1 | MH000607_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17852 | 19513 |
| AVO23614.1 | MH000607_p138 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 73406 | 73633 |
| AVO23550.1 | MH000607_p59 | hypothetical protein | phrog_923 | unknown function | unknown function | 1 | 40741 | 41586 |
| AVO23575.1 | MH000607_p84 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51839 | 52060 |
| AVO23522.1 | MH000607_p28 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 27273 | 28235 |
| AVO23569.1 | MH000607_p77 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48648 | 48965 |
| AVO23535.1 | MH000607_p41 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34404 | 34658 |
| AVO23626.1 | MH000607_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57271 | 57516 |
| AVO23555.1 | MH000607_p52 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 37197 | 37520 |
| AVO23627.1 | MH000607_p97 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57721 | 58320 |
| AVO23547.1 | MH000607_p56 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39855 | 40295 |
| AVO23608.1 | MH000607_p132 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 71559 | 71684 |
| AVO23564.1 | MH000607_p70 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 46312 | 46623 |
| AVO23511.1 | MH000607_p17 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 10169 | 10573 |
| AVO23545.1 | MH000607_p53 | integrase | phrog_1 | integrase | integration and excision | 1 | 37750 | 38631 |
| AVO23591.1 | MH000607_p113 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 66517 | 66654 |
| AVO23509.1 | MH000607_p15 | head-to-tail connector complex protein | phrog_1531 | head closure | connector | 1 | 9479 | 9814 |
| AVO23529.1 | MH000607_p35 | lysin B | phrog_102 | endolysin | lysis | 1 | 31613 | 32470 |
| AVO23515.1 | MH000607_p21 | tail assembly chaperone | phrog_5940 | tail assembly chaperone | tail | 1 | 12821 | 13099 |
| AVO23597.1 | MH000607_p119 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 67812 | 68012 |
| AVO23625.1 | MH000607_p93 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 56263 | 57084 |
| AVO23602.1 | MH000607_p126 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69745 | 69915 |
| AVO23578.1 | MH000607_p89 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 54172 | 54540 |
| AVO23612.1 | MH000607_p136 | hypothetical protein | phrog_4496 | unknown function | unknown function | -1 | 72878 | 73231 |
| AVO23598.1 | MH000607_p121 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 68143 | 68322 |
| AVO23580.1 | MH000607_p91 | hypothetical protein | phrog_10857 | unknown function | unknown function | 1 | 54632 | 54904 |
| AVO23513.1 | MH000607_p19 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11634 | 12107 |
| AVO23527.1 | MH000607_p33 | hypothetical protein | phrog_526 | holin | lysis | 1 | 30902 | 31285 |
| AVO23526.1 | MH000607_p32 | lysin A | phrog_317 | endolysin | lysis | 1 | 29396 | 30898 |
| AVO23586.1 | MH000607_p103 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 61761 | 62051 |
| AVO23530.1 | MH000607_p36 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32467 | 32883 |
| AVO23538.1 | MH000607_p44 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35043 | 35447 |
| AVO23546.1 | MH000607_p54 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38770 | 39009 |
| AVO23572.1 | MH000607_p80 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49835 | 50167 |
| AVO23528.1 | MH000607_p34 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31278 | 31616 |
| AVO23593.1 | MH000607_p115 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 66807 | 67019 |
| AVO23503.1 | MH000607_p9 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 3956 | 4177 |
| AVO23554.1 | MH000607_p48 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35906 | 36142 |
| AVO23553.1 | MH000607_p62 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42553 | 42858 |
| AVO23622.1 | MH000607_p83 | WhiB family transcription factor | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51523 | 51864 |
| AVO23561.1 | MH000607_p67 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44229 | 45197 |
| AVO23613.1 | MH000607_p137 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73236 | 73409 |
| AVO23520.1 | MH000607_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22039 | 24435 |
| AVO23604.1 | MH000607_p128 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 70067 | 70468 |
| AVO23556.1 | MH000607_p55 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 38987 | 39760 |
| AVO23609.1 | MH000607_p133 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 71674 | 71880 |
| AVO23551.1 | MH000607_p60 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41588 | 41734 |
| AVO23548.1 | MH000607_p57 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40512 | 40610 |
| AVO23600.1 | MH000607_p124 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 68977 | 69240 |
| AVO23621.1 | MH000607_p75 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 48008 | 48241 |
| AVO23536.1 | MH000607_p42 | hypothetical protein | phrog_5831 | unknown function | unknown function | -1 | 34655 | 34837 |
| AVO23584.1 | MH000607_p98 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58317 | 58859 |
| AVO23519.1 | MH000607_p25 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21201 | 22022 |
| AVO23588.1 | MH000607_p110 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64526 | 65311 |
| AVO23629.1 | MH000607_p101 | ClpP-like protease | phrog_94 | head maturation protease | head and packaging | 1 | 60493 | 61407 |