| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH001446 |
Definition |
Mycobacterium phage Megabear, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
60579 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
89 |
%GC |
67.52 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO21339.1 | MH001446_p29 | hypothetical protein | phrog_8248 | unknown function | unknown function | 1 | 32031 | 32177 |
| AVO21332.1 | MH001446_p22 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 24689 | 26125 |
| AVO21394.1 | MH001446_p84 | hypothetical protein | phrog_865 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58166 | 58348 |
| AVO21371.1 | MH001446_p61 | hypothetical protein | phrog_15432 | unknown function | unknown function | 1 | 47404 | 47754 |
| AVO21346.1 | MH001446_p36 | lysin A | phrog_317 | endolysin | lysis | 1 | 36026 | 37648 |
| AVO21337.1 | MH001446_p27 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 30948 | 31370 |
| AVO21314.1 | MH001446_p4 | hypothetical protein | phrog_21481 | unknown function | unknown function | 1 | 2536 | 2850 |
| AVO21367.1 | MH001446_p57 | hypothetical protein | phrog_21540 | unknown function | unknown function | 1 | 45942 | 46415 |
| AVO21397.1 | MH001446_p88 | hypothetical protein | phrog_1933 | unknown function | unknown function | 1 | 59732 | 59944 |
| AVO21359.1 | MH001446_p49 | hypothetical protein | phrog_18946 | unknown function | unknown function | 1 | 41899 | 42189 |
| AVO21323.1 | MH001446_p13 | membrane protein | phrog_2344 | unknown function | unknown function | 1 | 14461 | 14925 |
| AVO21352.1 | MH001446_p42 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39536 | 39757 |
| AVO21390.1 | MH001446_p80 | hypothetical protein | phrog_19324 | unknown function | unknown function | 1 | 56590 | 57132 |
| AVO21316.1 | MH001446_p6 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 3328 | 5202 |
| AVO21320.1 | MH001446_p10 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 12673 | 13449 |
| AVO21369.1 | MH001446_p59 | hypothetical protein | phrog_1495 | unknown function | unknown function | 1 | 46958 | 47194 |
| AVO21356.1 | MH001446_p46 | hypothetical protein | phrog_21720 | unknown function | unknown function | 1 | 40954 | 41139 |
| AVO21354.1 | MH001446_p44 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 40128 | 40529 |
| AVO21389.1 | MH001446_p79 | hypothetical protein | phrog_20551 | unknown function | unknown function | 1 | 56219 | 56590 |
| AVO21338.1 | MH001446_p28 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 31380 | 32024 |
| AVO21388.1 | MH001446_p78 | hypothetical protein | phrog_20126 | unknown function | unknown function | 1 | 55836 | 56222 |
| AVO21333.1 | MH001446_p23 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 26126 | 27163 |
| AVO21379.1 | MH001446_p69 | hypothetical protein | phrog_7858 | unknown function | unknown function | 1 | 50562 | 51950 |
| AVO21313.1 | MH001446_p3 | helix-turn-helix DNA binding domain protein | phrog_928 | unknown function | unknown function | 1 | 1974 | 2498 |
| AVO21363.1 | MH001446_p53 | hypothetical protein | phrog_21460 | unknown function | unknown function | 1 | 44174 | 44368 |
| AVO21312.1 | MH001446_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 348 | 1952 |
| AVO21398.1 | MH001446_p89 | hypothetical protein | phrog_17696 | unknown function | unknown function | 1 | 59941 | 60513 |
| AVO21377.1 | MH001446_p67 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 49449 | 49787 |
| AVO21342.1 | MH001446_p32 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 34112 | 34531 |
| AVO21335.1 | MH001446_p25 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 29324 | 30529 |
| AVO21364.1 | MH001446_p54 | hypothetical protein | phrog_12222 | unknown function | unknown function | 1 | 44365 | 44931 |
| AVO21334.1 | MH001446_p24 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 27160 | 29289 |
| AVO21392.1 | MH001446_p82 | hypothetical protein | phrog_20036 | unknown function | unknown function | 1 | 57605 | 57916 |
| AVO21376.1 | MH001446_p66 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49066 | 49365 |
| AVO21360.1 | MH001446_p50 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 42204 | 42809 |
| AVO21321.1 | MH001446_p11 | hypothetical protein | phrog_14250 | unknown function | unknown function | 1 | 13462 | 13845 |
| AVO21347.1 | MH001446_p37 | holin | phrog_526 | holin | lysis | 1 | 37653 | 38162 |
| AVO21326.1 | MH001446_p16 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 16492 | 17229 |
| AVO21380.1 | MH001446_p70 | hypothetical protein | phrog_7405 | unknown function | unknown function | 1 | 51947 | 52831 |
| AVO21361.1 | MH001446_p51 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 42806 | 43846 |
| AVO21368.1 | MH001446_p58 | hypothetical protein | phrog_20591 | unknown function | unknown function | 1 | 46455 | 46958 |
| AVO21387.1 | MH001446_p77 | hypothetical protein | phrog_19230 | unknown function | unknown function | 1 | 55648 | 55797 |
| AVO21327.1 | MH001446_p17 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 17229 | 17750 |
| AVO21349.1 | MH001446_p39 | hypothetical protein | phrog_21783 | unknown function | unknown function | 1 | 38672 | 39040 |
| AVO21385.1 | MH001446_p75 | hypothetical protein | phrog_2355 | unknown function | unknown function | 1 | 54933 | 55415 |
| AVO21350.1 | MH001446_p40 | hypothetical protein | phrog_20990 | unknown function | unknown function | 1 | 39031 | 39354 |
| AVO21373.1 | MH001446_p63 | hypothetical protein | phrog_24973 | unknown function | unknown function | 1 | 47972 | 48064 |
| AVO21343.1 | MH001446_p33 | hypothetical protein | phrog_2804 | virion structural protein | head and packaging | 1 | 34531 | 35241 |
| AVO21357.1 | MH001446_p47 | hypothetical protein | phrog_21184 | unknown function | unknown function | 1 | 41136 | 41552 |
| AVO21372.1 | MH001446_p62 | hypothetical protein | phrog_26094 | unknown function | unknown function | 1 | 47751 | 47972 |
| AVO21325.1 | MH001446_p15 | major tail protein | phrog_792 | major tail protein | tail | 1 | 15358 | 16464 |
| AVO21328.1 | MH001446_p18 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 17761 | 18147 |
| AVO21366.1 | MH001446_p56 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45202 | 45942 |
| AVO21386.1 | MH001446_p76 | hypothetical protein | phrog_7172 | unknown function | unknown function | 1 | 55412 | 55660 |
| AVO21329.1 | MH001446_p19 | tail assembly chaperone | phrog_5 | tail completion or Neck1 protein | connector | 1 | 18137 | 18547 |
| AVO21355.1 | MH001446_p45 | hypothetical protein | phrog_6351 | unknown function | unknown function | 1 | 40526 | 40942 |
| AVO21317.1 | MH001446_p7 | hypothetical protein | phrog_21406 | unknown function | unknown function | 1 | 5199 | 10205 |
| AVO21322.1 | MH001446_p12 | membrane protein | phrog_2272 | unknown function | unknown function | 1 | 13847 | 14464 |
| AVO21311.1 | MH001446_p1 | helix-turn-helix DNA binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40 | 351 |
| AVO21383.1 | MH001446_p73 | hypothetical protein | phrog_30687 | unknown function | unknown function | 1 | 54360 | 54692 |
| AVO21336.1 | MH001446_p26 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 30559 | 30939 |
| AVO21315.1 | MH001446_p5 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 2882 | 3286 |
| AVO21395.1 | MH001446_p86 | hypothetical protein | phrog_20750 | unknown function | unknown function | 1 | 58617 | 59240 |
| AVO21340.1 | MH001446_p30 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 32174 | 32773 |
| AVO21384.1 | MH001446_p74 | hypothetical protein | phrog_2287 | unknown function | unknown function | 1 | 54689 | 54877 |
| AVO21365.1 | MH001446_p55 | WhiB family transcription factor | phrog_9926 | transcriptional regulator WhiB-like | transcription regulation | 1 | 44928 | 45209 |
| AVO21358.1 | MH001446_p48 | hypothetical protein | phrog_9420 | unknown function | unknown function | 1 | 41540 | 41902 |
| AVO21348.1 | MH001446_p38 | helix-turn-helix DNA binding domain protein | phrog_14639 | cro-like repressor | transcription regulation | 1 | 38403 | 38675 |
| AVO21374.1 | MH001446_p64 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 48057 | 48599 |
| AVO21375.1 | MH001446_p65 | hypothetical protein | phrog_2450 | unknown function | unknown function | 1 | 48592 | 49020 |
| AVO21381.1 | MH001446_p71 | hypothetical protein | phrog_21464 | unknown function | unknown function | 1 | 52994 | 53503 |
| AVO21344.1 | MH001446_p34 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 35259 | 35615 |
| AVO21396.1 | MH001446_p87 | hypothetical protein | phrog_18180 | unknown function | unknown function | 1 | 59298 | 59624 |
| AVO21393.1 | MH001446_p83 | hypothetical protein | phrog_10592 | unknown function | unknown function | 1 | 57913 | 58164 |
| AVO21345.1 | MH001446_p35 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 35678 | 35962 |
| AVO21331.1 | MH001446_p21 | tape measure protein | phrog_934 | tail length tape measure protein | tail | 1 | 19168 | 24675 |
| AVO21382.1 | MH001446_p72 | hypothetical protein | phrog_5855 | unknown function | unknown function | 1 | 53607 | 54107 |
| AVO21391.1 | MH001446_p81 | hypothetical protein | phrog_20646 | unknown function | unknown function | 1 | 57129 | 57530 |
| AVO21341.1 | MH001446_p31 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 32770 | 34092 |
| AVO21370.1 | MH001446_p60 | hypothetical protein | phrog_18065 | unknown function | unknown function | 1 | 47204 | 47395 |
| AVO21319.1 | MH001446_p9 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 10537 | 12588 |
| AVO21362.1 | MH001446_p52 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43843 | 44184 |
| AVO21399.1 | MH001446_p85 | hypothetical protein | phrog_24634 | unknown function | unknown function | 1 | 58417 | 58629 |
| AVO21318.1 | MH001446_p8 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 10239 | 10427 |
| AVO21351.1 | MH001446_p41 | hypothetical protein | phrog_19173 | unknown function | unknown function | 1 | 39345 | 39542 |
| AVO21324.1 | MH001446_p14 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 14922 | 15254 |
| AVO21353.1 | MH001446_p43 | hypothetical protein | phrog_21317 | unknown function | unknown function | 1 | 39868 | 40131 |
| AVO21378.1 | MH001446_p68 | hypothetical protein | phrog_34534 | unknown function | unknown function | 1 | 50357 | 50464 |
| AVO21330.1 | MH001446_p20 | tail assembly chaperone | phrog_21090 | tail assembly chaperone | tail | 1 | 18567 | 19142 |