Genomic map of Mycobacterium phage UncleRicky (MH001448)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH001448
Definition
Mycobacterium phage UncleRicky, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
57256
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.33
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO21519.1 MH001448_p18 minor tail protein phrog_732 minor tail protein tail 1 16392 17222
AVO21569.1 MH001448_p68 hypothetical protein phrog_2070 unknown function unknown function 1 43496 43648
AVO21566.1 MH001448_p65 hypothetical protein phrog_2233 unknown function unknown function 1 42413 43090
AVO21541.1 MH001448_p40 hypothetical protein phrog_1839 unknown function unknown function 1 31818 31910
AVO21547.1 MH001448_p46 Cro protein phrog_2104 unknown function unknown function 1 35523 35816
AVO21602.1 MH001448_p101 hypothetical protein phrog_1693 unknown function unknown function 1 54767 55003
AVO21574.1 MH001448_p73 hypothetical protein phrog_2080 unknown function unknown function 1 46167 46427
AVO21549.1 MH001448_p48 hypothetical protein phrog_5253 unknown function unknown function 1 36739 37038
AVO21520.1 MH001448_p19 minor tail protein phrog_346 minor tail protein tail 1 17219 19756
AVO21544.1 MH001448_p43 integrase phrog_1 integrase integration and excision 1 32755 34056
AVO21553.1 MH001448_p52 hypothetical protein phrog_3381 unknown function unknown function 1 37718 37891
AVO21517.1 MH001448_p16 minor tail protein phrog_106 minor tail protein tail 1 12836 14545
AVO21561.1 MH001448_p60 hypothetical protein phrog_2078 unknown function unknown function 1 40822 40977
AVO21505.1 MH001448_p4 portal protein phrog_104 portal protein head and packaging 1 2199 3620
AVO21577.1 MH001448_p76 hypothetical protein phrog_1573 DNA methyltransferase other 1 46818 47246
AVO21556.1 MH001448_p55 hypothetical protein phrog_658 unknown function unknown function 1 38856 39203
AVO21525.1 MH001448_p24 hypothetical protein phrog_240 head protein head and packaging 1 24317 24658
AVO21516.1 MH001448_p15 tape measure protein phrog_1942 tail length tape measure protein tail 1 9323 12835
AVO21595.1 MH001448_p94 hypothetical protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 51705 51929
AVO21506.1 MH001448_p5 capsid maturation protease phrog_193 head maturation protease head and packaging 1 3604 4329
AVO21504.1 MH001448_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 797 2158
AVO21558.1 MH001448_p57 hypothetical protein phrog_2096 unknown function unknown function 1 39694 40179
AVO21518.1 MH001448_p17 minor tail protein phrog_110 minor tail protein tail 1 14628 16337
AVO21523.1 MH001448_p22 transposase phrog_2331 transposase integration and excision 1 22435 23754
AVO21534.1 MH001448_p33 lysin A phrog_700 endolysin lysis 1 27639 28832
AVO21512.1 MH001448_p11 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 6948 7352
AVO21508.1 MH001448_p7 major capsid protein phrog_10 major head protein head and packaging 1 5007 5915
AVO21536.1 MH001448_p35 holin phrog_443 holin lysis 1 29847 30080
AVO21522.1 MH001448_p21 hypothetical protein singleton unknown function unknown function 1 21636 22325
AVO21579.1 MH001448_p78 hypothetical protein phrog_3647 unknown function unknown function 1 47421 47582
AVO21568.1 MH001448_p67 hypothetical protein phrog_2704 unknown function unknown function 1 43356 43499
AVO21570.1 MH001448_p69 PAPS reductase-like domain protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 43645 44493
AVO21528.1 MH001448_p27 hypothetical protein phrog_754 minor tail protein tail 1 25583 26407
AVO21600.1 MH001448_p99 hypothetical protein phrog_1385 unknown function unknown function 1 52903 53145
AVO21605.1 MH001448_p104 transposase phrog_151 transposase integration and excision -1 56248 56583
AVO21531.1 MH001448_p30 hypothetical protein phrog_932 unknown function unknown function 1 27052 27198
AVO21562.1 MH001448_p61 hypothetical protein phrog_1834 unknown function unknown function 1 40974 41204
AVO21578.1 MH001448_p77 hypothetical protein phrog_2591 unknown function unknown function 1 47239 47424
AVO21542.1 MH001448_p41 hypothetical protein phrog_3693 unknown function unknown function -1 32013 32159
AVO21603.1 MH001448_p102 hypothetical protein phrog_8053 unknown function unknown function 1 54996 55205
AVO21548.1 MH001448_p47 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 35876 36742
AVO21604.1 MH001448_p103 transposase phrog_157 transposase integration and excision -1 55322 56251
AVO21576.1 MH001448_p75 hypothetical protein phrog_1943 unknown function unknown function 1 46633 46821
AVO21540.1 MH001448_p39 hypothetical protein phrog_1791 unknown function unknown function 1 31574 31825
AVO21571.1 MH001448_p70 hypothetical protein phrog_1311 unknown function unknown function 1 44490 44636
AVO21582.1 MH001448_p81 hypothetical protein phrog_722 unknown function unknown function 1 48065 48253
AVO21584.1 MH001448_p83 hypothetical protein phrog_10032 unknown function unknown function 1 48696 48860
AVO21601.1 MH001448_p100 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53142 54764
AVO21524.1 MH001448_p23 hypothetical protein singleton unknown function unknown function 1 23775 24299
AVO21567.1 MH001448_p66 hypothetical protein phrog_6938 unknown function unknown function 1 43087 43356
AVO21565.1 MH001448_p64 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42054 42416
AVO21593.1 MH001448_p92 hypothetical protein phrog_2247 unknown function unknown function 1 50707 50961
AVO21587.1 MH001448_p86 hypothetical protein phrog_6540 unknown function unknown function 1 49245 49541
AVO21521.1 MH001448_p20 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 19753 21639
AVO21589.1 MH001448_p88 hypothetical protein phrog_1545 unknown function unknown function 1 49717 49854
AVO21585.1 MH001448_p84 hypothetical protein phrog_13181 unknown function unknown function 1 48857 49060
AVO21572.1 MH001448_p71 G-I-Y-Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 44636 45196
AVO21507.1 MH001448_p6 scaffolding protein phrog_4638 head scaffolding protein head and packaging 1 4408 4944
AVO21530.1 MH001448_p29 hypothetical protein phrog_411 unknown function unknown function 1 26761 27045
AVO21560.1 MH001448_p59 helix-turn-helix DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40457 40822
AVO21591.1 MH001448_p90 hypothetical protein phrog_10901 unknown function unknown function 1 50193 50468
AVO21515.1 MH001448_p13 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8390 9326
AVO21539.1 MH001448_p38 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 30696 31517
AVO21529.1 MH001448_p28 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 26413 26610
AVO21527.1 MH001448_p26 hypothetical protein phrog_2012 minor tail protein tail 1 24948 25586
AVO21509.1 MH001448_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 5928 6299
AVO21537.1 MH001448_p36 hypothetical protein phrog_404 minor tail protein tail 1 30077 30451
AVO21580.1 MH001448_p79 hypothetical protein phrog_3447 unknown function unknown function 1 47579 47791
AVO21573.1 MH001448_p72 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 45196 46170
AVO21511.1 MH001448_p10 hypothetical protein phrog_1929 head-tail connector protein connector 1 6632 6958
AVO21590.1 MH001448_p89 hypothetical protein phrog_5186 unknown function unknown function 1 49851 50024
AVO21503.1 MH001448_p2 terminase small subunit phrog_4479 terminase small subunit head and packaging 1 445 699
AVO21551.1 MH001448_p50 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 37336 37533
AVO21564.1 MH001448_p63 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41479 42057
AVO21535.1 MH001448_p34 lysin B phrog_102 endolysin lysis 1 28832 29833
AVO21550.1 MH001448_p49 hypothetical protein phrog_2025 unknown function unknown function 1 37035 37250
AVO21559.1 MH001448_p58 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 40176 40460
AVO21599.1 MH001448_p98 hypothetical protein phrog_1186 unknown function unknown function 1 52505 52906
AVO21606.1 MH001448_p105 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56637 57164
AVO21532.1 MH001448_p31 hypothetical protein phrog_1172 unknown function unknown function 1 27195 27335
AVO21557.1 MH001448_p56 WhiB family transcription factor phrog_1333 unknown function unknown function 1 39203 39697
AVO21502.1 MH001448_p1 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41 373
AVO21546.1 MH001448_p45 hypothetical protein phrog_2838 transcriptional repressor transcription regulation -1 34844 35416
AVO21510.1 MH001448_p9 hypothetical protein phrog_763 head-tail adaptor connector 1 6296 6625
AVO21514.1 MH001448_p14 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8390 8941
AVO21581.1 MH001448_p80 hypothetical protein phrog_647 unknown function unknown function 1 47788 48072
AVO21533.1 MH001448_p32 hypothetical protein phrog_747 unknown function unknown function 1 27370 27642
AVO21545.1 MH001448_p44 hypothetical protein phrog_1948 unknown function unknown function -1 34135 34581
AVO21575.1 MH001448_p74 hypothetical protein phrog_2730 unknown function unknown function 1 46427 46630
AVO21563.1 MH001448_p62 hypothetical protein phrog_2632 unknown function unknown function 1 41201 41482
AVO21588.1 MH001448_p87 hypothetical protein phrog_1091 unknown function unknown function 1 49523 49717
AVO21513.1 MH001448_p12 major tail protein phrog_476 major tail protein tail 1 7390 8271
AVO21597.1 MH001448_p96 hypothetical protein phrog_1694 unknown function unknown function 1 52096 52254
AVO21594.1 MH001448_p93 hypothetical protein phrog_1467 unknown function unknown function 1 50958 51596
AVO21586.1 MH001448_p85 hypothetical protein phrog_1901 unknown function unknown function 1 49057 49248
AVO21583.1 MH001448_p82 MPME1 protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 48323 48694
AVO21596.1 MH001448_p95 hypothetical protein phrog_1869 unknown function unknown function 1 51926 52090
AVO21554.1 MH001448_p53 hypothetical protein phrog_1797 unknown function unknown function 1 37888 38472
AVO21543.1 MH001448_p42 hypothetical protein phrog_2437 unknown function unknown function -1 32159 32359
AVO21555.1 MH001448_p54 hypothetical protein phrog_1849 unknown function unknown function 1 38581 38859
AVO21538.1 MH001448_p37 hypothetical protein phrog_2004 unknown function unknown function 1 30476 30709
AVO21592.1 MH001448_p91 hypothetical protein phrog_6816 unknown function unknown function 1 50468 50710
AVO21552.1 MH001448_p51 hypothetical protein phrog_1816 unknown function unknown function 1 37530 37721
AVO21526.1 MH001448_p25 hypothetical protein phrog_2005 minor tail protein tail 1 24681 24935
AVO21598.1 MH001448_p97 hypothetical protein phrog_3813 unknown function unknown function 1 52251 52508