| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH001448 |
Definition |
Mycobacterium phage UncleRicky, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
57256 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
61.33 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVO21519.1 | MH001448_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16392 | 17222 |
| AVO21569.1 | MH001448_p68 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 43496 | 43648 |
| AVO21566.1 | MH001448_p65 | hypothetical protein | phrog_2233 | unknown function | unknown function | 1 | 42413 | 43090 |
| AVO21541.1 | MH001448_p40 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 31818 | 31910 |
| AVO21547.1 | MH001448_p46 | Cro protein | phrog_2104 | unknown function | unknown function | 1 | 35523 | 35816 |
| AVO21602.1 | MH001448_p101 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 54767 | 55003 |
| AVO21574.1 | MH001448_p73 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 46167 | 46427 |
| AVO21549.1 | MH001448_p48 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 36739 | 37038 |
| AVO21520.1 | MH001448_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17219 | 19756 |
| AVO21544.1 | MH001448_p43 | integrase | phrog_1 | integrase | integration and excision | 1 | 32755 | 34056 |
| AVO21553.1 | MH001448_p52 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 37718 | 37891 |
| AVO21517.1 | MH001448_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 12836 | 14545 |
| AVO21561.1 | MH001448_p60 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40822 | 40977 |
| AVO21505.1 | MH001448_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2199 | 3620 |
| AVO21577.1 | MH001448_p76 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 46818 | 47246 |
| AVO21556.1 | MH001448_p55 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38856 | 39203 |
| AVO21525.1 | MH001448_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24317 | 24658 |
| AVO21516.1 | MH001448_p15 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9323 | 12835 |
| AVO21595.1 | MH001448_p94 | hypothetical protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 51705 | 51929 |
| AVO21506.1 | MH001448_p5 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3604 | 4329 |
| AVO21504.1 | MH001448_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 797 | 2158 |
| AVO21558.1 | MH001448_p57 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39694 | 40179 |
| AVO21518.1 | MH001448_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14628 | 16337 |
| AVO21523.1 | MH001448_p22 | transposase | phrog_2331 | transposase | integration and excision | 1 | 22435 | 23754 |
| AVO21534.1 | MH001448_p33 | lysin A | phrog_700 | endolysin | lysis | 1 | 27639 | 28832 |
| AVO21512.1 | MH001448_p11 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 6948 | 7352 |
| AVO21508.1 | MH001448_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5007 | 5915 |
| AVO21536.1 | MH001448_p35 | holin | phrog_443 | holin | lysis | 1 | 29847 | 30080 |
| AVO21522.1 | MH001448_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21636 | 22325 |
| AVO21579.1 | MH001448_p78 | hypothetical protein | phrog_3647 | unknown function | unknown function | 1 | 47421 | 47582 |
| AVO21568.1 | MH001448_p67 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 43356 | 43499 |
| AVO21570.1 | MH001448_p69 | PAPS reductase-like domain protein | phrog_424 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | 1 | 43645 | 44493 |
| AVO21528.1 | MH001448_p27 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 25583 | 26407 |
| AVO21600.1 | MH001448_p99 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 52903 | 53145 |
| AVO21605.1 | MH001448_p104 | transposase | phrog_151 | transposase | integration and excision | -1 | 56248 | 56583 |
| AVO21531.1 | MH001448_p30 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 27052 | 27198 |
| AVO21562.1 | MH001448_p61 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 40974 | 41204 |
| AVO21578.1 | MH001448_p77 | hypothetical protein | phrog_2591 | unknown function | unknown function | 1 | 47239 | 47424 |
| AVO21542.1 | MH001448_p41 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 32013 | 32159 |
| AVO21603.1 | MH001448_p102 | hypothetical protein | phrog_8053 | unknown function | unknown function | 1 | 54996 | 55205 |
| AVO21548.1 | MH001448_p47 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 35876 | 36742 |
| AVO21604.1 | MH001448_p103 | transposase | phrog_157 | transposase | integration and excision | -1 | 55322 | 56251 |
| AVO21576.1 | MH001448_p75 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 46633 | 46821 |
| AVO21540.1 | MH001448_p39 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 31574 | 31825 |
| AVO21571.1 | MH001448_p70 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 44490 | 44636 |
| AVO21582.1 | MH001448_p81 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 48065 | 48253 |
| AVO21584.1 | MH001448_p83 | hypothetical protein | phrog_10032 | unknown function | unknown function | 1 | 48696 | 48860 |
| AVO21601.1 | MH001448_p100 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53142 | 54764 |
| AVO21524.1 | MH001448_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23775 | 24299 |
| AVO21567.1 | MH001448_p66 | hypothetical protein | phrog_6938 | unknown function | unknown function | 1 | 43087 | 43356 |
| AVO21565.1 | MH001448_p64 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42054 | 42416 |
| AVO21593.1 | MH001448_p92 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 50707 | 50961 |
| AVO21587.1 | MH001448_p86 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 49245 | 49541 |
| AVO21521.1 | MH001448_p20 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19753 | 21639 |
| AVO21589.1 | MH001448_p88 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 49717 | 49854 |
| AVO21585.1 | MH001448_p84 | hypothetical protein | phrog_13181 | unknown function | unknown function | 1 | 48857 | 49060 |
| AVO21572.1 | MH001448_p71 | G-I-Y-Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44636 | 45196 |
| AVO21507.1 | MH001448_p6 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 4408 | 4944 |
| AVO21530.1 | MH001448_p29 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 26761 | 27045 |
| AVO21560.1 | MH001448_p59 | helix-turn-helix DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40457 | 40822 |
| AVO21591.1 | MH001448_p90 | hypothetical protein | phrog_10901 | unknown function | unknown function | 1 | 50193 | 50468 |
| AVO21515.1 | MH001448_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8390 | 9326 |
| AVO21539.1 | MH001448_p38 | exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 30696 | 31517 |
| AVO21529.1 | MH001448_p28 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 26413 | 26610 |
| AVO21527.1 | MH001448_p26 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 24948 | 25586 |
| AVO21509.1 | MH001448_p8 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 5928 | 6299 |
| AVO21537.1 | MH001448_p36 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 30077 | 30451 |
| AVO21580.1 | MH001448_p79 | hypothetical protein | phrog_3447 | unknown function | unknown function | 1 | 47579 | 47791 |
| AVO21573.1 | MH001448_p72 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45196 | 46170 |
| AVO21511.1 | MH001448_p10 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6632 | 6958 |
| AVO21590.1 | MH001448_p89 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 49851 | 50024 |
| AVO21503.1 | MH001448_p2 | terminase small subunit | phrog_4479 | terminase small subunit | head and packaging | 1 | 445 | 699 |
| AVO21551.1 | MH001448_p50 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 37336 | 37533 |
| AVO21564.1 | MH001448_p63 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41479 | 42057 |
| AVO21535.1 | MH001448_p34 | lysin B | phrog_102 | endolysin | lysis | 1 | 28832 | 29833 |
| AVO21550.1 | MH001448_p49 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 37035 | 37250 |
| AVO21559.1 | MH001448_p58 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40176 | 40460 |
| AVO21599.1 | MH001448_p98 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52505 | 52906 |
| AVO21606.1 | MH001448_p105 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56637 | 57164 |
| AVO21532.1 | MH001448_p31 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 27195 | 27335 |
| AVO21557.1 | MH001448_p56 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 39203 | 39697 |
| AVO21502.1 | MH001448_p1 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41 | 373 |
| AVO21546.1 | MH001448_p45 | hypothetical protein | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 34844 | 35416 |
| AVO21510.1 | MH001448_p9 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6296 | 6625 |
| AVO21514.1 | MH001448_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8390 | 8941 |
| AVO21581.1 | MH001448_p80 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 47788 | 48072 |
| AVO21533.1 | MH001448_p32 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 27370 | 27642 |
| AVO21545.1 | MH001448_p44 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 34135 | 34581 |
| AVO21575.1 | MH001448_p74 | hypothetical protein | phrog_2730 | unknown function | unknown function | 1 | 46427 | 46630 |
| AVO21563.1 | MH001448_p62 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 41201 | 41482 |
| AVO21588.1 | MH001448_p87 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 49523 | 49717 |
| AVO21513.1 | MH001448_p12 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7390 | 8271 |
| AVO21597.1 | MH001448_p96 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 52096 | 52254 |
| AVO21594.1 | MH001448_p93 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 50958 | 51596 |
| AVO21586.1 | MH001448_p85 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 49057 | 49248 |
| AVO21583.1 | MH001448_p82 | MPME1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 48323 | 48694 |
| AVO21596.1 | MH001448_p95 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 51926 | 52090 |
| AVO21554.1 | MH001448_p53 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37888 | 38472 |
| AVO21543.1 | MH001448_p42 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 32159 | 32359 |
| AVO21555.1 | MH001448_p54 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38581 | 38859 |
| AVO21538.1 | MH001448_p37 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 30476 | 30709 |
| AVO21592.1 | MH001448_p91 | hypothetical protein | phrog_6816 | unknown function | unknown function | 1 | 50468 | 50710 |
| AVO21552.1 | MH001448_p51 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37530 | 37721 |
| AVO21526.1 | MH001448_p25 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 24681 | 24935 |
| AVO21598.1 | MH001448_p97 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 52251 | 52508 |