Genomic map of Gordonia phage Waits (MH001454)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH001454
Definition
Gordonia phage Waits, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Soupsvirus; Gordonia virus Waits.
DB of origin
NUCCORE
Length
52856
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
98
%GC
61.97
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO22053.1 MH001454_p19 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 13015 13383
AVO22075.1 MH001454_p42 hypothetical protein phrog_13791 unknown function unknown function -1 27355 27579
AVO22125.1 MH001454_p95 hypothetical protein phrog_13636 unknown function unknown function -1 50448 50630
AVO22130.1 MH001454_p52 hypothetical protein phrog_13800 membrane protein moron, auxiliary metabolic gene and host takeover -1 32649 32762
AVO22097.1 MH001454_p65 hypothetical protein phrog_13497 unknown function unknown function -1 38738 38917
AVO22109.1 MH001454_p79 hypothetical protein phrog_1562 unknown function unknown function -1 44575 44973
AVO22040.1 MH001454_p6 tail protein phrog_1126 unknown function unknown function 1 3081 3416
AVO22114.1 MH001454_p84 hypothetical protein phrog_1006 unknown function unknown function -1 46567 47034
AVO22129.1 MH001454_p39 hypothetical protein phrog_14604 unknown function unknown function -1 26747 26881
AVO22038.1 MH001454_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2278 2574
AVO22105.1 MH001454_p75 hypothetical protein phrog_9751 unknown function unknown function -1 43047 43220
AVO22121.1 MH001454_p91 hypothetical protein phrog_13953 unknown function unknown function -1 48580 48981
AVO22094.1 MH001454_p62 hypothetical protein phrog_13334 unknown function unknown function -1 37660 37872
AVO22117.1 MH001454_p87 hypothetical protein phrog_12613 unknown function unknown function -1 47618 47788
AVO22123.1 MH001454_p93 hypothetical protein phrog_6351 unknown function unknown function -1 49826 50212
AVO22085.1 MH001454_p53 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32747 34804
AVO22054.1 MH001454_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13383 13751
AVO22044.1 MH001454_p10 holin phrog_13682 holin lysis 1 6410 6637
AVO22063.1 MH001454_p29 minor tail protein phrog_404 minor tail protein tail 1 21375 21716
AVO22131.1 MH001454_p68 hypothetical protein phrog_13833 membrane protein moron, auxiliary metabolic gene and host takeover -1 39991 40104
AVO22041.1 MH001454_p7 hypothetical protein phrog_1197 tail protein tail 1 3413 4405
AVO22061.1 MH001454_p27 minor tail protein phrog_110 minor tail protein tail 1 19063 20850
AVO22115.1 MH001454_p85 hypothetical protein phrog_12580 unknown function unknown function -1 47149 47430
AVO22052.1 MH001454_p18 hypothetical protein phrog_830 head-tail connector protein connector 1 12831 13028
AVO22086.1 MH001454_p54 hypothetical protein phrog_2046 unknown function unknown function -1 34801 34992
AVO22127.1 MH001454_p97 hypothetical protein phrog_7225 unknown function unknown function -1 50867 51076
AVO22055.1 MH001454_p21 head-to-tail connector complex protein phrog_123 tail terminator connector 1 13764 14174
AVO22067.1 MH001454_p33 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 24649 25215
AVO22110.1 MH001454_p80 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44989 45510
AVO22049.1 MH001454_p15 capsid protein phrog_10 major head protein head and packaging 1 11262 12212
AVO22039.1 MH001454_p5 hypothetical protein phrog_226 minor tail protein tail 1 2610 3068
AVO22120.1 MH001454_p90 hypothetical protein phrog_1946 unknown function unknown function -1 48222 48464
AVO22132.1 MH001454_p69 hypothetical protein phrog_14261 membrane protein moron, auxiliary metabolic gene and host takeover -1 40101 40199
AVO22071.1 MH001454_p37 hypothetical protein phrog_980 unknown function unknown function -1 26143 26373
AVO22050.1 MH001454_p16 hypothetical protein phrog_748 head-tail connector protein connector 1 12283 12453
AVO22089.1 MH001454_p57 helix-turn-helix DNA binding protein phrog_354 sigma-K factor transcription regulation -1 35316 35888
AVO22066.1 MH001454_p32 hypothetical protein phrog_4480 unknown function unknown function 1 23858 24166
AVO22048.1 MH001454_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10717 11229
AVO22118.1 MH001454_p88 hypothetical protein singleton unknown function unknown function -1 47800 47997
AVO22112.1 MH001454_p82 hypothetical protein singleton unknown function unknown function -1 46131 46310
AVO22107.1 MH001454_p77 hypothetical protein phrog_520 unknown function unknown function -1 43422 43700
AVO22128.1 MH001454_p98 hypothetical protein phrog_13265 unknown function unknown function -1 51080 51364
AVO22082.1 MH001454_p49 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30962 31687
AVO22098.1 MH001454_p66 lysin B phrog_6187 unknown function unknown function -1 38917 39552
AVO22058.1 MH001454_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14915 15819
AVO22078.1 MH001454_p45 hypothetical protein phrog_762 unknown function unknown function -1 29832 30191
AVO22124.1 MH001454_p94 hypothetical protein phrog_14166 unknown function unknown function -1 50215 50445
AVO22042.1 MH001454_p8 hypothetical protein phrog_356 minor tail protein tail 1 4402 5076
AVO22037.1 MH001454_p3 hypothetical protein phrog_4491 unknown function unknown function 1 1982 2281
AVO22070.1 MH001454_p36 hypothetical protein phrog_11556 unknown function unknown function 1 25780 25992
AVO22072.1 MH001454_p38 hypothetical protein phrog_383 unknown function unknown function -1 26373 26747
AVO22079.1 MH001454_p46 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30188 30481
AVO22043.1 MH001454_p9 lysin A phrog_2998 endolysin lysis 1 5366 6400
AVO22092.1 MH001454_p60 hypothetical protein phrog_4589 unknown function unknown function -1 37221 37397
AVO22096.1 MH001454_p64 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38332 38712
AVO22099.1 MH001454_p67 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39549 40007
AVO22106.1 MH001454_p76 hypothetical protein phrog_10900 unknown function unknown function -1 43231 43425
AVO22084.1 MH001454_p51 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32116 32652
AVO22046.1 MH001454_p12 portal protein phrog_104 portal protein head and packaging 1 8347 9807
AVO22077.1 MH001454_p44 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28041 29831
AVO22090.1 MH001454_p58 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36014 36778
AVO22093.1 MH001454_p61 NrdH-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37394 37663
AVO22116.1 MH001454_p86 hypothetical protein phrog_9830 unknown function unknown function -1 47433 47618
AVO22122.1 MH001454_p92 hypothetical protein phrog_2554 unknown function unknown function -1 49012 49743
AVO22057.1 MH001454_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14915 15298
AVO22074.1 MH001454_p41 hypothetical protein phrog_3771 unknown function unknown function -1 27107 27355
AVO22091.1 MH001454_p59 hypothetical protein phrog_2387 nucleotide kinase other -1 36775 37224
AVO22056.1 MH001454_p22 major tail protein phrog_117 major tail protein tail 1 14199 14801
AVO22064.1 MH001454_p30 minor tail protein phrog_2689 minor tail protein tail 1 21713 23425
AVO22073.1 MH001454_p40 hypothetical protein phrog_13673 unknown function unknown function -1 26881 27114
AVO22104.1 MH001454_p74 DnaB-like dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42152 42982
AVO22101.1 MH001454_p71 hypothetical protein phrog_1374 unknown function unknown function -1 40651 40830
AVO22080.1 MH001454_p47 hypothetical protein phrog_690 unknown function unknown function -1 30478 30705
AVO22047.1 MH001454_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9804 10664
AVO22083.1 MH001454_p50 MazG-like nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 31684 32028
AVO22119.1 MH001454_p89 hypothetical protein phrog_14026 unknown function unknown function -1 48000 48167
AVO22108.1 MH001454_p78 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43727 44530
AVO22100.1 MH001454_p70 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40242 40640
AVO22113.1 MH001454_p83 hypothetical protein phrog_14317 unknown function unknown function -1 46313 46570
AVO22036.1 MH001454_p2 ADP ribosyltransferase phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1335 1985
AVO22068.1 MH001454_p34 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 25208 25522
AVO22062.1 MH001454_p28 minor tail protein phrog_352 minor tail protein tail 1 20935 21378
AVO22102.1 MH001454_p72 hypothetical protein phrog_762 unknown function unknown function -1 40833 41597
AVO22088.1 MH001454_p56 hypothetical protein phrog_499 unknown function unknown function -1 35150 35332
AVO22081.1 MH001454_p48 hypothetical protein phrog_1454 unknown function unknown function -1 30705 30953
AVO22111.1 MH001454_p81 hypothetical protein phrog_13943 unknown function unknown function -1 45908 46147
AVO22060.1 MH001454_p26 minor tail protein phrog_106 minor tail protein tail 1 18089 19066
AVO22076.1 MH001454_p43 hypothetical protein phrog_16184 unknown function unknown function -1 27581 28027
AVO22069.1 MH001454_p35 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 25574 25813
AVO22065.1 MH001454_p31 DNA binding protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 23529 23861
AVO22103.1 MH001454_p73 hypothetical protein phrog_13179 unknown function unknown function -1 41630 42109
AVO22051.1 MH001454_p17 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 12457 12834
AVO22059.1 MH001454_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 15890 18079
AVO22035.1 MH001454_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 430 1260
AVO22126.1 MH001454_p96 hypothetical protein phrog_10850 unknown function unknown function -1 50632 50865
AVO22045.1 MH001454_p11 terminase phrog_9 terminase large subunit head and packaging 1 6653 8350
AVO22087.1 MH001454_p55 hypothetical protein phrog_37922 unknown function unknown function -1 34989 35150
AVO22095.1 MH001454_p63 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37869 38501