Genomic map of Streptomyces phage Nesbitt (MH001457)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH001457
Definition
Streptomyces phage Nesbitt, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Abbeymikolonvirus; unclassified Abbeymikolonvirus.
DB of origin
NUCCORE
Length
42446
Host Name
Streptomyces lividans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
66.83
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVO22260.1 MH001457_p3 portal protein phrog_104 portal protein head and packaging 1 2376 3785
AVO22310.1 MH001457_p53 hypothetical protein phrog_23818 unknown function unknown function 1 37170 37709
AVO22277.1 MH001457_p20 hypothetical protein phrog_16452 unknown function unknown function 1 16635 17288
AVO22266.1 MH001457_p9 head-to-tail connector complex protein phrog_501 head closure Hc1 connector 1 7263 7604
AVO22288.1 MH001457_p31 hypothetical protein phrog_9220 unknown function unknown function 1 23274 24023
AVO22307.1 MH001457_p50 hypothetical protein singleton unknown function unknown function 1 35473 36087
AVO22258.1 MH001457_p1 terminase small subunit phrog_83 terminase small subunit head and packaging 1 162 650
AVO22302.1 MH001457_p45 hypothetical protein phrog_34624 unknown function unknown function 1 33591 33827
AVO22286.1 MH001457_p29 hypothetical protein phrog_8950 unknown function unknown function 1 22712 22843
AVO22314.1 MH001457_p57 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41580 41873
AVO22281.1 MH001457_p24 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 18695 19339
AVO22293.1 MH001457_p36 hypothetical protein phrog_29260 unknown function unknown function 1 25175 25762
AVO22300.1 MH001457_p43 RNA polymerase sigma factor phrog_32691 RNA polymerase sigma factor transcription regulation 1 32499 33359
AVO22297.1 MH001457_p40 DNA primase phrog_6088 DNA primase DNA, RNA and nucleotide metabolism 1 26930 29377
AVO22290.1 MH001457_p33 hypothetical protein phrog_14927 unknown function unknown function 1 24368 24598
AVO22295.1 MH001457_p38 hypothetical protein singleton unknown function unknown function 1 26165 26374
AVO22315.1 MH001457_p58 hypothetical protein phrog_36498 unknown function unknown function 1 41939 42085
AVO22264.1 MH001457_p7 hypothetical protein phrog_25934 unknown function unknown function 1 6562 6720
AVO22305.1 MH001457_p48 hypothetical protein phrog_15073 unknown function unknown function 1 34701 34934
AVO22285.1 MH001457_p28 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 21736 22608
AVO22265.1 MH001457_p8 head-to-tail connector complex protein phrog_442 head-tail adaptor connector 1 6733 7266
AVO22313.1 MH001457_p56 hypothetical protein phrog_1106 unknown function unknown function 1 40243 40788
AVO22311.1 MH001457_p54 hypothetical protein phrog_34075 unknown function unknown function 1 37728 38051
AVO22308.1 MH001457_p51 hypothetical protein phrog_28535 unknown function unknown function 1 36391 36888
AVO22298.1 MH001457_p41 DNA methylase phrog_363 DNA methyltransferase other 1 29441 30088
AVO22284.1 MH001457_p27 hypothetical protein singleton unknown function unknown function 1 21114 21416
AVO22263.1 MH001457_p6 major capsid protein phrog_212 major head protein head and packaging 1 5607 6551
AVO22306.1 MH001457_p49 hypothetical protein singleton unknown function unknown function 1 35045 35476
AVO22304.1 MH001457_p47 hypothetical protein phrog_3236 unknown function unknown function 1 34330 34704
AVO22312.1 MH001457_p55 integrase phrog_95 integrase integration and excision 1 38186 39901
AVO22274.1 MH001457_p17 hypothetical protein phrog_16363 unknown function unknown function 1 12968 15220
AVO22301.1 MH001457_p44 hypothetical protein phrog_30347 unknown function unknown function 1 33406 33594
AVO22262.1 MH001457_p5 scaffolding protein phrog_4708 head scaffolding protein head and packaging 1 4857 5552
AVO22292.1 MH001457_p35 hypothetical protein phrog_13282 unknown function unknown function 1 24858 25166
AVO22275.1 MH001457_p18 minor tail protein phrog_1887 tail protein tail 1 15235 16353
AVO22270.1 MH001457_p13 tail assembly chaperone phrog_10551 tail assembly chaperone tail 1 8915 9181
AVO22303.1 MH001457_p46 hypothetical protein phrog_33678 unknown function unknown function 1 33824 34333
AVO22269.1 MH001457_p12 major tail protein phrog_117 major tail protein tail 1 8240 8812
AVO22279.1 MH001457_p22 hypothetical protein phrog_5225 unknown function unknown function 1 18218 18436
AVO22273.1 MH001457_p16 hypothetical protein phrog_22293 unknown function unknown function 1 12703 12909
AVO22283.1 MH001457_p26 immunity repressor phrog_29596 unknown function unknown function 1 19975 21051
AVO22296.1 MH001457_p39 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 26358 26897
AVO22289.1 MH001457_p32 hypothetical protein phrog_34802 unknown function unknown function 1 24144 24371
AVO22267.1 MH001457_p10 hypothetical protein phrog_387 neck protein connector 1 7604 7855
AVO22287.1 MH001457_p30 hypothetical protein phrog_38231 unknown function unknown function 1 22840 23166
AVO22272.1 MH001457_p15 tape measure protein phrog_971 endolysin lysis 1 9565 12702
AVO22276.1 MH001457_p19 hypothetical protein phrog_21558 unknown function unknown function 1 16353 16610
AVO22278.1 MH001457_p21 lysin phrog_9589 endolysin lysis 1 17334 18188
AVO22282.1 MH001457_p25 hypothetical protein phrog_26783 unknown function unknown function 1 19431 19805
AVO22259.1 MH001457_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 643 2349
AVO22294.1 MH001457_p37 hypothetical protein singleton unknown function unknown function 1 25829 26023
AVO22268.1 MH001457_p11 head-to-tail connector complex protein phrog_123 tail terminator connector 1 7855 8250
AVO22271.1 MH001457_p14 tail assembly chaperone phrog_5813 tail assembly chaperone tail 1 9217 9561
AVO22309.1 MH001457_p52 hypothetical protein phrog_19898 unknown function unknown function 1 36903 37148
AVO22280.1 MH001457_p23 hypothetical protein phrog_4316 unknown function unknown function 1 18458 18670
AVO22261.1 MH001457_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3796 4842
AVO22299.1 MH001457_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 30153 32018
AVO22291.1 MH001457_p34 hypothetical protein phrog_32905 unknown function unknown function 1 24682 24858