Genomic map of Streptomyces phage Yara (MH019215)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH019215
Definition
Streptomyces phage Yara, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
68671
Host Name
Streptomyces toxytricini
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
63.89
Number of singletons
39
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVP41382.1 MH019215_p48 hypothetical protein singleton unknown function unknown function -1 37910 38920
AVP41366.1 MH019215_p32 hypothetical protein singleton unknown function unknown function 1 26834 27643
AVP41425.1 MH019215_p91 hypothetical protein phrog_36273 unknown function unknown function -1 59738 60115
AVP41375.1 MH019215_p41 thymidylate synthase phrog_35637 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31777 32877
AVP41352.1 MH019215_p18 major tail protein phrog_158 major tail protein tail 1 11012 11446
AVP41351.1 MH019215_p17 hypothetical protein phrog_16194 tail protein tail 1 10665 11009
AVP41381.1 MH019215_p47 hypothetical protein phrog_38561 unknown function unknown function -1 37589 37858
AVP41408.1 MH019215_p74 hypothetical protein singleton unknown function unknown function -1 52214 52498
AVP41403.1 MH019215_p69 hypothetical protein singleton unknown function unknown function -1 49738 49965
AVP41340.1 MH019215_p6 hypothetical protein phrog_4307 unknown function unknown function 1 2060 2335
AVP41348.1 MH019215_p14 head-to-tail connector complex protein phrog_25 head closure Hc1 connector 1 9509 9856
AVP41372.1 MH019215_p38 hypothetical protein phrog_28431 unknown function unknown function -1 31119 31313
AVP41410.1 MH019215_p76 hypothetical protein singleton unknown function unknown function -1 52762 52902
AVP41414.1 MH019215_p80 hypothetical protein singleton unknown function unknown function -1 55085 55540
AVP41374.1 MH019215_p40 hypothetical protein singleton unknown function unknown function -1 31491 31604
AVP41380.1 MH019215_p46 DNA polymerase III alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 34395 37592
AVP41401.1 MH019215_p67 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 49126 49527
AVP41338.1 MH019215_p4 hypothetical protein singleton unknown function unknown function 1 1220 1600
AVP41390.1 MH019215_p56 hypothetical protein phrog_3236 unknown function unknown function -1 41650 41985
AVP41417.1 MH019215_p83 hypothetical protein singleton unknown function unknown function -1 56180 56335
AVP41419.1 MH019215_p85 hypothetical protein singleton unknown function unknown function -1 56575 57207
AVP41346.1 MH019215_p12 major capsid protein phrog_10 major head protein head and packaging 1 7862 8935
AVP41349.1 MH019215_p15 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 9856 10203
AVP41420.1 MH019215_p86 hypothetical protein singleton unknown function unknown function -1 57295 57432
AVP41439.1 MH019215_p105 hypothetical protein phrog_38269 unknown function unknown function -1 67568 67951
AVP41423.1 MH019215_p89 hypothetical protein phrog_20596 unknown function unknown function -1 58701 59333
AVP41436.1 MH019215_p102 hypothetical protein singleton unknown function unknown function -1 63833 64102
AVP41431.1 MH019215_p97 hypothetical protein singleton unknown function unknown function -1 62125 62547
AVP41387.1 MH019215_p53 hypothetical protein singleton unknown function unknown function -1 40712 40912
AVP41398.1 MH019215_p64 hypothetical protein phrog_34140 unknown function unknown function -1 46455 46991
AVP41393.1 MH019215_p59 hypothetical protein phrog_37845 unknown function unknown function -1 43277 44209
AVP41384.1 MH019215_p50 hypothetical protein phrog_8720 unknown function unknown function -1 39545 40330
AVP41415.1 MH019215_p81 hypothetical protein singleton unknown function unknown function -1 55537 55770
AVP41335.1 MH019215_p1 hypothetical protein singleton unknown function unknown function 1 1 423
AVP41397.1 MH019215_p63 hypothetical protein phrog_32127 unknown function unknown function -1 46142 46369
AVP41402.1 MH019215_p68 hypothetical protein phrog_33909 unknown function unknown function -1 49514 49717
AVP41388.1 MH019215_p54 hypothetical protein phrog_32309 unknown function unknown function -1 40912 41457
AVP41389.1 MH019215_p55 hypothetical protein phrog_38727 unknown function unknown function -1 41462 41653
AVP41350.1 MH019215_p16 hypothetical protein phrog_176 tail terminator connector 1 10200 10607
AVP41395.1 MH019215_p61 hypothetical protein phrog_8491 unknown function unknown function -1 44977 45153
AVP41361.1 MH019215_p27 hypothetical protein phrog_16641 tail fiber protein tail 1 20471 24352
AVP41421.1 MH019215_p87 hypothetical protein singleton unknown function unknown function -1 57432 57671
AVP41373.1 MH019215_p39 hypothetical protein phrog_28043 unknown function unknown function -1 31306 31491
AVP41336.1 MH019215_p2 hypothetical protein singleton unknown function unknown function 1 616 1038
AVP41355.1 MH019215_p21 tape measure protein phrog_34082 tail length tape measure protein tail 1 12150 13889
AVP41345.1 MH019215_p11 hypothetical protein singleton unknown function unknown function 1 7470 7730
AVP41409.1 MH019215_p75 hypothetical protein singleton unknown function unknown function -1 52584 52748
AVP41378.1 MH019215_p44 hypothetical protein singleton unknown function unknown function -1 33634 34260
AVP41428.1 MH019215_p94 hypothetical protein singleton unknown function unknown function -1 60919 61053
AVP41343.1 MH019215_p9 hypothetical protein phrog_241 head morphogenesis head and packaging 1 5566 6624
AVP41422.1 MH019215_p88 hypothetical protein singleton unknown function unknown function -1 57763 58014
AVP41386.1 MH019215_p52 hypothetical protein phrog_36196 unknown function unknown function -1 40521 40721
AVP41404.1 MH019215_p70 hypothetical protein singleton unknown function unknown function -1 49977 50231
AVP41435.1 MH019215_p101 hypothetical protein singleton unknown function unknown function -1 63648 63782
AVP41341.1 MH019215_p7 terminase phrog_38 terminase large subunit head and packaging 1 2325 3908
AVP41364.1 MH019215_p30 methyltransferase phrog_36045 unknown function unknown function 1 25924 26553
AVP41394.1 MH019215_p60 AAA-ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 44223 44990
AVP41342.1 MH019215_p8 portal protein phrog_104 portal protein head and packaging 1 3997 5562
AVP41413.1 MH019215_p79 hypothetical protein phrog_32114 unknown function unknown function -1 54490 54837
AVP41437.1 MH019215_p103 hypothetical protein phrog_15934 unknown function unknown function -1 64110 65039
AVP41418.1 MH019215_p84 hypothetical protein singleton unknown function unknown function -1 56328 56573
AVP41396.1 MH019215_p62 nuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 45150 46145
AVP41367.1 MH019215_p33 DNA helicase phrog_2488 DNA helicase DNA, RNA and nucleotide metabolism -1 27850 29664
AVP41365.1 MH019215_p31 hypothetical protein singleton unknown function unknown function 1 26555 26767
AVP41377.1 MH019215_p43 hypothetical protein phrog_2831 unknown function unknown function -1 33248 33601
AVP41344.1 MH019215_p10 hypothetical protein phrog_8952 unknown function unknown function 1 6636 7457
AVP41399.1 MH019215_p65 hypothetical protein singleton unknown function unknown function -1 47063 47233
AVP41433.1 MH019215_p99 hypothetical protein phrog_27095 unknown function unknown function -1 63014 63271
AVP41438.1 MH019215_p104 DNA primase phrog_6088 DNA primase DNA, RNA and nucleotide metabolism -1 65039 67522
AVP41369.1 MH019215_p35 hypothetical protein phrog_38788 unknown function unknown function -1 30373 30615
AVP41371.1 MH019215_p37 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism -1 30864 31112
AVP41379.1 MH019215_p45 hypothetical protein singleton unknown function unknown function -1 34257 34385
AVP41427.1 MH019215_p93 hypothetical protein phrog_33121 unknown function unknown function -1 60692 60844
AVP41362.1 MH019215_p28 glycosyltransferase phrog_28745 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 24349 25275
AVP41363.1 MH019215_p29 hypothetical protein phrog_33187 unknown function unknown function 1 25272 25931
AVP41412.1 MH019215_p78 hypothetical protein phrog_20596 unknown function unknown function -1 53490 53975
AVP41426.1 MH019215_p92 hypothetical protein phrog_27095 unknown function unknown function -1 60338 60610
AVP41391.1 MH019215_p57 hypothetical protein singleton unknown function unknown function -1 41987 42244
AVP41400.1 MH019215_p66 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 47230 49125
AVP41360.1 MH019215_p26 hypothetical protein phrog_4316 unknown function unknown function 1 20240 20461
AVP41407.1 MH019215_p73 hypothetical protein phrog_421 unknown function unknown function -1 51136 52131
AVP41429.1 MH019215_p95 hypothetical protein singleton unknown function unknown function -1 61219 61554
AVP41356.1 MH019215_p22 hypothetical protein phrog_5313 unknown function unknown function 1 13893 18437
AVP41376.1 MH019215_p42 hypothetical protein singleton unknown function unknown function -1 32874 33251
AVP41434.1 MH019215_p100 hypothetical protein singleton unknown function unknown function -1 63407 63670
AVP41370.1 MH019215_p36 hypothetical protein phrog_28087 unknown function unknown function -1 30635 30850
AVP41392.1 MH019215_p58 hypothetical protein phrog_5698 unknown function unknown function -1 42356 43009
AVP41430.1 MH019215_p96 hypothetical protein phrog_32368 unknown function unknown function -1 61688 61915
AVP41405.1 MH019215_p71 hypothetical protein singleton unknown function unknown function -1 50361 50546
AVP41368.1 MH019215_p34 hypothetical protein phrog_1981 unknown function unknown function -1 29774 30376
AVP41383.1 MH019215_p49 hydrolase phrog_415 polynucleotide kinase other -1 38907 39548
AVP41416.1 MH019215_p82 hypothetical protein singleton unknown function unknown function -1 55748 56098
AVP41357.1 MH019215_p23 hypothetical protein phrog_9468 unknown function unknown function 1 18446 18862
AVP41358.1 MH019215_p24 hypothetical protein singleton unknown function unknown function 1 18961 19167
AVP41411.1 MH019215_p77 hypothetical protein phrog_36293 unknown function unknown function -1 52905 53360
AVP41406.1 MH019215_p72 hypothetical protein phrog_6032 unknown function unknown function -1 50543 51136
AVP41339.1 MH019215_p5 hypothetical protein singleton unknown function unknown function 1 1593 2063
AVP41354.1 MH019215_p20 hypothetical protein phrog_337 tail protein tail 1 11875 12165
AVP41424.1 MH019215_p90 hypothetical protein singleton unknown function unknown function -1 59492 59668
AVP41385.1 MH019215_p51 hypothetical protein singleton unknown function unknown function -1 40333 40524
AVP41347.1 MH019215_p13 hypothetical protein phrog_22288 unknown function unknown function 1 9057 9512
AVP41432.1 MH019215_p98 hypothetical protein phrog_27095 unknown function unknown function -1 62656 62883
AVP41337.1 MH019215_p3 hypothetical protein phrog_31267 unknown function unknown function 1 1042 1212
AVP41353.1 MH019215_p19 tail assembly chaperone phrog_344 tail assembly chaperone tail 1 11456 11860
AVP41359.1 MH019215_p25 lysin phrog_880 endolysin lysis 1 19303 20226