| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH019215 |
Definition |
Streptomyces phage Yara, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
68671 |
Host Name |
Streptomyces toxytricini |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
63.89 |
Number of singletons |
39 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVP41382.1 | MH019215_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37910 | 38920 |
| AVP41366.1 | MH019215_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26834 | 27643 |
| AVP41425.1 | MH019215_p91 | hypothetical protein | phrog_36273 | unknown function | unknown function | -1 | 59738 | 60115 |
| AVP41375.1 | MH019215_p41 | thymidylate synthase | phrog_35637 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 31777 | 32877 |
| AVP41352.1 | MH019215_p18 | major tail protein | phrog_158 | major tail protein | tail | 1 | 11012 | 11446 |
| AVP41351.1 | MH019215_p17 | hypothetical protein | phrog_16194 | tail protein | tail | 1 | 10665 | 11009 |
| AVP41381.1 | MH019215_p47 | hypothetical protein | phrog_38561 | unknown function | unknown function | -1 | 37589 | 37858 |
| AVP41408.1 | MH019215_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52214 | 52498 |
| AVP41403.1 | MH019215_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49738 | 49965 |
| AVP41340.1 | MH019215_p6 | hypothetical protein | phrog_4307 | unknown function | unknown function | 1 | 2060 | 2335 |
| AVP41348.1 | MH019215_p14 | head-to-tail connector complex protein | phrog_25 | head closure Hc1 | connector | 1 | 9509 | 9856 |
| AVP41372.1 | MH019215_p38 | hypothetical protein | phrog_28431 | unknown function | unknown function | -1 | 31119 | 31313 |
| AVP41410.1 | MH019215_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52762 | 52902 |
| AVP41414.1 | MH019215_p80 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55085 | 55540 |
| AVP41374.1 | MH019215_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31491 | 31604 |
| AVP41380.1 | MH019215_p46 | DNA polymerase III alpha | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 34395 | 37592 |
| AVP41401.1 | MH019215_p67 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 49126 | 49527 |
| AVP41338.1 | MH019215_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1220 | 1600 |
| AVP41390.1 | MH019215_p56 | hypothetical protein | phrog_3236 | unknown function | unknown function | -1 | 41650 | 41985 |
| AVP41417.1 | MH019215_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56180 | 56335 |
| AVP41419.1 | MH019215_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56575 | 57207 |
| AVP41346.1 | MH019215_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7862 | 8935 |
| AVP41349.1 | MH019215_p15 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 9856 | 10203 |
| AVP41420.1 | MH019215_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57295 | 57432 |
| AVP41439.1 | MH019215_p105 | hypothetical protein | phrog_38269 | unknown function | unknown function | -1 | 67568 | 67951 |
| AVP41423.1 | MH019215_p89 | hypothetical protein | phrog_20596 | unknown function | unknown function | -1 | 58701 | 59333 |
| AVP41436.1 | MH019215_p102 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63833 | 64102 |
| AVP41431.1 | MH019215_p97 | hypothetical protein | singleton | unknown function | unknown function | -1 | 62125 | 62547 |
| AVP41387.1 | MH019215_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40712 | 40912 |
| AVP41398.1 | MH019215_p64 | hypothetical protein | phrog_34140 | unknown function | unknown function | -1 | 46455 | 46991 |
| AVP41393.1 | MH019215_p59 | hypothetical protein | phrog_37845 | unknown function | unknown function | -1 | 43277 | 44209 |
| AVP41384.1 | MH019215_p50 | hypothetical protein | phrog_8720 | unknown function | unknown function | -1 | 39545 | 40330 |
| AVP41415.1 | MH019215_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55537 | 55770 |
| AVP41335.1 | MH019215_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1 | 423 |
| AVP41397.1 | MH019215_p63 | hypothetical protein | phrog_32127 | unknown function | unknown function | -1 | 46142 | 46369 |
| AVP41402.1 | MH019215_p68 | hypothetical protein | phrog_33909 | unknown function | unknown function | -1 | 49514 | 49717 |
| AVP41388.1 | MH019215_p54 | hypothetical protein | phrog_32309 | unknown function | unknown function | -1 | 40912 | 41457 |
| AVP41389.1 | MH019215_p55 | hypothetical protein | phrog_38727 | unknown function | unknown function | -1 | 41462 | 41653 |
| AVP41350.1 | MH019215_p16 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 10200 | 10607 |
| AVP41395.1 | MH019215_p61 | hypothetical protein | phrog_8491 | unknown function | unknown function | -1 | 44977 | 45153 |
| AVP41361.1 | MH019215_p27 | hypothetical protein | phrog_16641 | tail fiber protein | tail | 1 | 20471 | 24352 |
| AVP41421.1 | MH019215_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57432 | 57671 |
| AVP41373.1 | MH019215_p39 | hypothetical protein | phrog_28043 | unknown function | unknown function | -1 | 31306 | 31491 |
| AVP41336.1 | MH019215_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 616 | 1038 |
| AVP41355.1 | MH019215_p21 | tape measure protein | phrog_34082 | tail length tape measure protein | tail | 1 | 12150 | 13889 |
| AVP41345.1 | MH019215_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7470 | 7730 |
| AVP41409.1 | MH019215_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52584 | 52748 |
| AVP41378.1 | MH019215_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33634 | 34260 |
| AVP41428.1 | MH019215_p94 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60919 | 61053 |
| AVP41343.1 | MH019215_p9 | hypothetical protein | phrog_241 | head morphogenesis | head and packaging | 1 | 5566 | 6624 |
| AVP41422.1 | MH019215_p88 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57763 | 58014 |
| AVP41386.1 | MH019215_p52 | hypothetical protein | phrog_36196 | unknown function | unknown function | -1 | 40521 | 40721 |
| AVP41404.1 | MH019215_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49977 | 50231 |
| AVP41435.1 | MH019215_p101 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63648 | 63782 |
| AVP41341.1 | MH019215_p7 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 2325 | 3908 |
| AVP41364.1 | MH019215_p30 | methyltransferase | phrog_36045 | unknown function | unknown function | 1 | 25924 | 26553 |
| AVP41394.1 | MH019215_p60 | AAA-ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 44223 | 44990 |
| AVP41342.1 | MH019215_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3997 | 5562 |
| AVP41413.1 | MH019215_p79 | hypothetical protein | phrog_32114 | unknown function | unknown function | -1 | 54490 | 54837 |
| AVP41437.1 | MH019215_p103 | hypothetical protein | phrog_15934 | unknown function | unknown function | -1 | 64110 | 65039 |
| AVP41418.1 | MH019215_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56328 | 56573 |
| AVP41396.1 | MH019215_p62 | nuclease | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 45150 | 46145 |
| AVP41367.1 | MH019215_p33 | DNA helicase | phrog_2488 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 27850 | 29664 |
| AVP41365.1 | MH019215_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26555 | 26767 |
| AVP41377.1 | MH019215_p43 | hypothetical protein | phrog_2831 | unknown function | unknown function | -1 | 33248 | 33601 |
| AVP41344.1 | MH019215_p10 | hypothetical protein | phrog_8952 | unknown function | unknown function | 1 | 6636 | 7457 |
| AVP41399.1 | MH019215_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47063 | 47233 |
| AVP41433.1 | MH019215_p99 | hypothetical protein | phrog_27095 | unknown function | unknown function | -1 | 63014 | 63271 |
| AVP41438.1 | MH019215_p104 | DNA primase | phrog_6088 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 65039 | 67522 |
| AVP41369.1 | MH019215_p35 | hypothetical protein | phrog_38788 | unknown function | unknown function | -1 | 30373 | 30615 |
| AVP41371.1 | MH019215_p37 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 30864 | 31112 |
| AVP41379.1 | MH019215_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34257 | 34385 |
| AVP41427.1 | MH019215_p93 | hypothetical protein | phrog_33121 | unknown function | unknown function | -1 | 60692 | 60844 |
| AVP41362.1 | MH019215_p28 | glycosyltransferase | phrog_28745 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 24349 | 25275 |
| AVP41363.1 | MH019215_p29 | hypothetical protein | phrog_33187 | unknown function | unknown function | 1 | 25272 | 25931 |
| AVP41412.1 | MH019215_p78 | hypothetical protein | phrog_20596 | unknown function | unknown function | -1 | 53490 | 53975 |
| AVP41426.1 | MH019215_p92 | hypothetical protein | phrog_27095 | unknown function | unknown function | -1 | 60338 | 60610 |
| AVP41391.1 | MH019215_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41987 | 42244 |
| AVP41400.1 | MH019215_p66 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 47230 | 49125 |
| AVP41360.1 | MH019215_p26 | hypothetical protein | phrog_4316 | unknown function | unknown function | 1 | 20240 | 20461 |
| AVP41407.1 | MH019215_p73 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 51136 | 52131 |
| AVP41429.1 | MH019215_p95 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61219 | 61554 |
| AVP41356.1 | MH019215_p22 | hypothetical protein | phrog_5313 | unknown function | unknown function | 1 | 13893 | 18437 |
| AVP41376.1 | MH019215_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32874 | 33251 |
| AVP41434.1 | MH019215_p100 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63407 | 63670 |
| AVP41370.1 | MH019215_p36 | hypothetical protein | phrog_28087 | unknown function | unknown function | -1 | 30635 | 30850 |
| AVP41392.1 | MH019215_p58 | hypothetical protein | phrog_5698 | unknown function | unknown function | -1 | 42356 | 43009 |
| AVP41430.1 | MH019215_p96 | hypothetical protein | phrog_32368 | unknown function | unknown function | -1 | 61688 | 61915 |
| AVP41405.1 | MH019215_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50361 | 50546 |
| AVP41368.1 | MH019215_p34 | hypothetical protein | phrog_1981 | unknown function | unknown function | -1 | 29774 | 30376 |
| AVP41383.1 | MH019215_p49 | hydrolase | phrog_415 | polynucleotide kinase | other | -1 | 38907 | 39548 |
| AVP41416.1 | MH019215_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55748 | 56098 |
| AVP41357.1 | MH019215_p23 | hypothetical protein | phrog_9468 | unknown function | unknown function | 1 | 18446 | 18862 |
| AVP41358.1 | MH019215_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18961 | 19167 |
| AVP41411.1 | MH019215_p77 | hypothetical protein | phrog_36293 | unknown function | unknown function | -1 | 52905 | 53360 |
| AVP41406.1 | MH019215_p72 | hypothetical protein | phrog_6032 | unknown function | unknown function | -1 | 50543 | 51136 |
| AVP41339.1 | MH019215_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1593 | 2063 |
| AVP41354.1 | MH019215_p20 | hypothetical protein | phrog_337 | tail protein | tail | 1 | 11875 | 12165 |
| AVP41424.1 | MH019215_p90 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59492 | 59668 |
| AVP41385.1 | MH019215_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40333 | 40524 |
| AVP41347.1 | MH019215_p13 | hypothetical protein | phrog_22288 | unknown function | unknown function | 1 | 9057 | 9512 |
| AVP41432.1 | MH019215_p98 | hypothetical protein | phrog_27095 | unknown function | unknown function | -1 | 62656 | 62883 |
| AVP41337.1 | MH019215_p3 | hypothetical protein | phrog_31267 | unknown function | unknown function | 1 | 1042 | 1212 |
| AVP41353.1 | MH019215_p19 | tail assembly chaperone | phrog_344 | tail assembly chaperone | tail | 1 | 11456 | 11860 |
| AVP41359.1 | MH019215_p25 | lysin | phrog_880 | endolysin | lysis | 1 | 19303 | 20226 |