Genomic map of Mycobacterium phage Naca (MH020239)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH020239
Definition
Mycobacterium phage Naca, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
51594
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
59.83
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVP42066.1 MH020239_p27 minor tail protein phrog_2683 minor tail protein tail 1 22398 23780
AVP42047.1 MH020239_p8 terminase phrog_9 terminase large subunit head and packaging 1 6070 7848
AVP42116.1 MH020239_p80 hypothetical protein phrog_2124 unknown function unknown function -1 46912 47061
AVP42109.1 MH020239_p71 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44325 44855
AVP42111.1 MH020239_p74 hypothetical protein phrog_5066 unknown function unknown function -1 45639 45899
AVP42107.1 MH020239_p69 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43210 44025
AVP42115.1 MH020239_p78 hypothetical protein phrog_6649 unknown function unknown function -1 46587 46793
AVP42071.1 MH020239_p32 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 26715 27224
AVP42108.1 MH020239_p70 hypothetical protein phrog_5957 unknown function unknown function -1 44022 44309
AVP42120.1 MH020239_p84 hypothetical protein phrog_3906 unknown function unknown function -1 48109 48942
AVP42123.1 MH020239_p87 hypothetical protein phrog_3471 unknown function unknown function -1 49959 50210
AVP42053.1 MH020239_p14 hypothetical protein phrog_2348 unknown function unknown function 1 12093 12236
AVP42078.1 MH020239_p39 hypothetical protein phrog_19744 unknown function unknown function -1 30778 30894
AVP42068.1 MH020239_p29 hypothetical protein phrog_1712 unknown function unknown function -1 24174 24473
AVP42090.1 MH020239_p51 hypothetical protein phrog_5242 unknown function unknown function -1 37704 37973
AVP42092.1 MH020239_p53 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38254 38823
AVP42075.1 MH020239_p36 hypothetical protein phrog_5282 unknown function unknown function -1 28056 28340
AVP42126.1 MH020239_p72 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 45119 45403
AVP42100.1 MH020239_p62 hypothetical protein phrog_8372 unknown function unknown function -1 40643 40816
AVP42086.1 MH020239_p47 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35431 36054
AVP42058.1 MH020239_p20 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14284 14754
AVP42055.1 MH020239_p16 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 12595 13008
AVP42097.1 MH020239_p59 hypothetical protein phrog_4539 unknown function unknown function -1 40323 40421
AVP42077.1 MH020239_p38 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28828 30726
AVP42113.1 MH020239_p76 hypothetical protein phrog_5561 unknown function unknown function -1 46067 46246
AVP42059.1 MH020239_p19 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14284 15167
AVP42106.1 MH020239_p68 hypothetical protein phrog_642 unknown function unknown function -1 42904 43206
AVP42125.1 MH020239_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38726 39136
AVP42060.1 MH020239_p21 tape measure protein phrog_305 tail length tape measure protein tail 1 15172 18438
AVP42117.1 MH020239_p81 hypothetical protein phrog_9830 unknown function unknown function -1 47063 47209
AVP42074.1 MH020239_p35 hypothetical protein phrog_383 unknown function unknown function -1 27620 28066
AVP42102.1 MH020239_p64 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41473 42279
AVP42091.1 MH020239_p52 hypothetical protein phrog_5270 unknown function unknown function -1 37970 38257
AVP42119.1 MH020239_p83 hypothetical protein phrog_5927 unknown function unknown function -1 47781 48062
AVP42052.1 MH020239_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 11722 12096
AVP42118.1 MH020239_p82 hypothetical protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 47217 47759
AVP42056.1 MH020239_p17 hypothetical protein phrog_123 tail terminator connector 1 13009 13416
AVP42096.1 MH020239_p58 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39869 40333
AVP42085.1 MH020239_p46 hypothetical protein phrog_1454 unknown function unknown function -1 35107 35412
AVP42061.1 MH020239_p22 minor tail protein phrog_106 minor tail protein tail 1 18502 19515
AVP42057.1 MH020239_p18 major tail protein phrog_117 major tail protein tail 1 13432 14262
AVP42124.1 MH020239_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 505 804
AVP42098.1 MH020239_p60 hypothetical protein phrog_6893 unknown function unknown function -1 40414 40497
AVP42070.1 MH020239_p31 hypothetical protein phrog_733 excisionase integration and excision 1 26187 26615
AVP42076.1 MH020239_p37 hypothetical protein phrog_2650 unknown function unknown function -1 28337 28780
AVP42049.1 MH020239_p10 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9278 10117
AVP42103.1 MH020239_p65 hypothetical protein phrog_2903 unknown function unknown function -1 42266 42496
AVP42095.1 MH020239_p57 hypothetical protein phrog_397 unknown function unknown function -1 39505 39771
AVP42048.1 MH020239_p9 portal protein phrog_104 portal protein head and packaging 1 7848 9281
AVP42088.1 MH020239_p49 hypothetical protein phrog_1167 phosphofructokinase other -1 36818 37309
AVP42043.1 MH020239_p4 hypothetical protein phrog_1197 tail protein tail 1 2357 4141
AVP42105.1 MH020239_p67 hypothetical protein phrog_520 unknown function unknown function -1 42675 42929
AVP42084.1 MH020239_p45 hypothetical protein phrog_499 unknown function unknown function -1 34937 35107
AVP42064.1 MH020239_p25 hypothetical protein phrog_981 minor tail protein tail 1 21782 22084
AVP42099.1 MH020239_p61 hypothetical protein phrog_1498 unknown function unknown function -1 40494 40646
AVP42069.1 MH020239_p30 integrase phrog_95 integrase integration and excision -1 24470 25915
AVP42121.1 MH020239_p85 hypothetical protein phrog_6093 unknown function unknown function -1 49031 49186
AVP42073.1 MH020239_p34 hypothetical protein phrog_980 unknown function unknown function -1 27354 27563
AVP42087.1 MH020239_p48 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36051 36821
AVP42041.1 MH020239_p2 hypothetical protein phrog_226 minor tail protein tail 1 842 1291
AVP42104.1 MH020239_p66 hypothetical protein phrog_18682 unknown function unknown function -1 42496 42678
AVP42046.1 MH020239_p7 lysin B phrog_102 endolysin lysis 1 5264 6073
AVP42112.1 MH020239_p75 hypothetical protein phrog_6322 unknown function unknown function -1 45902 46054
AVP42072.1 MH020239_p33 hypothetical protein phrog_15643 unknown function unknown function -1 27211 27354
AVP42045.1 MH020239_p6 hypothetical protein phrog_774 unknown function unknown function 1 5055 5267
AVP42122.1 MH020239_p86 hypothetical protein phrog_6340 unknown function unknown function -1 49189 49602
AVP42127.1 MH020239_p79 hypothetical protein phrog_1477 unknown function unknown function -1 46790 46930
AVP42082.1 MH020239_p43 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32299 32823
AVP42050.1 MH020239_p11 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10140 10685
AVP42054.1 MH020239_p15 hypothetical protein phrog_320 head closure Hc1 connector 1 12233 12595
AVP42062.1 MH020239_p23 minor tail protein phrog_110 minor tail protein tail 1 19512 21311
AVP42110.1 MH020239_p73 hypothetical protein phrog_1178 unknown function unknown function -1 45400 45642
AVP42063.1 MH020239_p24 hypothetical protein phrog_352 minor tail protein tail 1 21325 21789
AVP42093.1 MH020239_p55 hypothetical protein phrog_5993 unknown function unknown function -1 39138 39389
AVP42051.1 MH020239_p12 major capsid protein phrog_10 major head protein head and packaging 1 10712 11653
AVP42042.1 MH020239_p3 hypothetical protein phrog_1260 minor tail protein tail 1 1398 2360
AVP42081.1 MH020239_p42 ThyX-like thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31527 32243
AVP42065.1 MH020239_p26 hypothetical protein phrog_404 minor tail protein tail 1 22111 22401
AVP42114.1 MH020239_p77 hypothetical protein phrog_5476 unknown function unknown function -1 46243 46590
AVP42101.1 MH020239_p63 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40813 41202
AVP42080.1 MH020239_p41 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31271 31534
AVP42094.1 MH020239_p56 hypothetical protein singleton unknown function unknown function -1 39386 39517
AVP42089.1 MH020239_p50 hypothetical protein phrog_4195 unknown function unknown function -1 37306 37707
AVP42067.1 MH020239_p28 hypothetical protein phrog_2235 minor tail protein tail 1 23788 24114
AVP42079.1 MH020239_p40 hypothetical protein phrog_762 unknown function unknown function -1 30894 31274
AVP42083.1 MH020239_p44 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32849 34927
AVP42044.1 MH020239_p5 lysin A phrog_1512 endolysin lysis 1 4378 5058