| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH020241 |
Definition |
Gordonia phage Fenry, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
49965 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
67.2 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVP42283.1 | MH020241_p57 | ssDNA binding protein | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39683 | 40777 |
| AVP42294.1 | MH020241_p68 | hypothetical protein | phrog_10260 | unknown function | unknown function | 1 | 44226 | 44384 |
| AVP42230.1 | MH020241_p4 | capsid maturation protease | phrog_3894 | head maturation protease | head and packaging | 1 | 3317 | 4729 |
| AVP42232.1 | MH020241_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5212 | 6141 |
| AVP42253.1 | MH020241_p27 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 23105 | 24622 |
| AVP42236.1 | MH020241_p10 | hypothetical protein | phrog_9658 | head-tail connector protein | connector | 1 | 7339 | 7626 |
| AVP42300.1 | MH020241_p74 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47299 | 47889 |
| AVP42249.1 | MH020241_p23 | membrane protein | phrog_10261 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20419 | 20877 |
| AVP42248.1 | MH020241_p22 | membrane protein | phrog_11800 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20178 | 20432 |
| AVP42291.1 | MH020241_p65 | hypothetical protein | phrog_11360 | unknown function | unknown function | 1 | 43311 | 43529 |
| AVP42239.1 | MH020241_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 8428 | 9066 |
| AVP42284.1 | MH020241_p58 | hypothetical protein | phrog_8105 | unknown function | unknown function | 1 | 40774 | 41079 |
| AVP42241.1 | MH020241_p14 | tail assembly chaperone | phrog_8183 | tail assembly chaperone | tail | 1 | 9169 | 9953 |
| AVP42304.1 | MH020241_p78 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49536 | 49898 |
| AVP42289.1 | MH020241_p63 | hypothetical protein | phrog_10682 | unknown function | unknown function | 1 | 42347 | 42532 |
| AVP42301.1 | MH020241_p75 | DNA binding protein | phrog_12987 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 47886 | 48071 |
| AVP42261.1 | MH020241_p35 | RelE-like toxin | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | -1 | 29220 | 29480 |
| AVP42295.1 | MH020241_p69 | HNH endonuclease | phrog_2118 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44374 | 44781 |
| AVP42270.1 | MH020241_p44 | membrane protein | phrog_8218 | unknown function | unknown function | 1 | 35040 | 35210 |
| AVP42279.1 | MH020241_p53 | hypothetical protein | phrog_6877 | unknown function | unknown function | 1 | 37464 | 37817 |
| AVP42251.1 | MH020241_p25 | hypothetical protein | phrog_9406 | unknown function | unknown function | 1 | 21671 | 22045 |
| AVP42269.1 | MH020241_p43 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 34202 | 34963 |
| AVP42235.1 | MH020241_p9 | head-to-tail connector complex protein | phrog_501 | head closure Hc1 | connector | 1 | 6968 | 7330 |
| AVP42244.1 | MH020241_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16369 | 18015 |
| AVP42257.1 | MH020241_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28101 | 28343 |
| AVP42260.1 | MH020241_p34 | RelB-like antitoxin | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | -1 | 28978 | 29223 |
| AVP42271.1 | MH020241_p45 | hypothetical protein | phrog_6554 | unknown function | unknown function | 1 | 35207 | 35389 |
| AVP42292.1 | MH020241_p66 | hypothetical protein | phrog_12575 | unknown function | unknown function | 1 | 43526 | 43915 |
| AVP42263.1 | MH020241_p37 | integrase | phrog_95 | integrase | integration and excision | 1 | 30762 | 32153 |
| AVP42285.1 | MH020241_p59 | membrane protein | phrog_12075 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 41076 | 41288 |
| AVP42297.1 | MH020241_p71 | DNA binding protein | phrog_2857 | tail fiber protein | tail | 1 | 45556 | 45852 |
| AVP42262.1 | MH020241_p36 | hypothetical protein | phrog_12638 | unknown function | unknown function | -1 | 29756 | 30628 |
| AVP42282.1 | MH020241_p56 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 38757 | 39686 |
| AVP42277.1 | MH020241_p51 | hypothetical protein | phrog_9981 | unknown function | unknown function | 1 | 37058 | 37231 |
| AVP42290.1 | MH020241_p64 | nucleotidyl transferase | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 42529 | 43314 |
| AVP42252.1 | MH020241_p26 | minor tail protein | phrog_4120 | minor tail protein | tail | 1 | 22038 | 23105 |
| AVP42275.1 | MH020241_p49 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36364 | 36726 |
| AVP42274.1 | MH020241_p48 | hypothetical protein | phrog_11014 | unknown function | unknown function | 1 | 35996 | 36367 |
| AVP42299.1 | MH020241_p73 | DNA binding protein | phrog_11256 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 46229 | 47299 |
| AVP42296.1 | MH020241_p70 | DNA binding protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 44774 | 45559 |
| AVP42273.1 | MH020241_p47 | DNA binding protein | phrog_9909 | unknown function | unknown function | 1 | 35697 | 35999 |
| AVP42234.1 | MH020241_p8 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6576 | 6968 |
| AVP42243.1 | MH020241_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15512 | 16372 |
| AVP42227.1 | MH020241_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 57 | 398 |
| AVP42237.1 | MH020241_p11 | head-to-tail connector complex protein | phrog_5837 | head closure Hc1 | connector | 1 | 7619 | 7906 |
| AVP42288.1 | MH020241_p62 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 41952 | 42347 |
| AVP42247.1 | MH020241_p21 | membrane protein | phrog_443 | holin | lysis | 1 | 19653 | 20114 |
| AVP42266.1 | MH020241_p40 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 32836 | 33564 |
| AVP42238.1 | MH020241_p12 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 7903 | 8322 |
| AVP42281.1 | MH020241_p55 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 38167 | 38757 |
| AVP42255.1 | MH020241_p29 | minor tail protein | phrog_25765 | minor tail protein | tail | 1 | 24950 | 27100 |
| AVP42267.1 | MH020241_p41 | CRO protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33811 | 34032 |
| AVP42303.1 | MH020241_p77 | hypothetical protein | phrog_33634 | unknown function | unknown function | 1 | 48841 | 49308 |
| AVP42293.1 | MH020241_p67 | hypothetical protein | phrog_13233 | unknown function | unknown function | 1 | 43915 | 44229 |
| AVP42246.1 | MH020241_p20 | lysin A, glycosyl hydrolase domain | phrog_3084 | endolysin | lysis | 1 | 18739 | 19650 |
| AVP42276.1 | MH020241_p50 | hypothetical protein | phrog_5984 | unknown function | unknown function | 1 | 36723 | 37061 |
| AVP42264.1 | MH020241_p38 | helix-turn-helix DNA binding domain protein | phrog_5316 | unknown function | unknown function | -1 | 32155 | 32364 |
| AVP42287.1 | MH020241_p61 | membrane protein | phrog_10784 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 41770 | 41955 |
| AVP42302.1 | MH020241_p76 | DNA binding protein | phrog_908 | unknown function | unknown function | 1 | 48068 | 48844 |
| AVP42258.1 | MH020241_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28363 | 28581 |
| AVP42240.1 | MH020241_p15 | tail assembly chaperone | phrog_5010 | tail assembly chaperone | tail | 1 | 9169 | 9579 |
| AVP42298.1 | MH020241_p72 | hypothetical protein | phrog_16913 | unknown function | unknown function | 1 | 45849 | 46232 |
| AVP42272.1 | MH020241_p46 | hypothetical protein | phrog_9588 | unknown function | unknown function | 1 | 35386 | 35700 |
| AVP42265.1 | MH020241_p39 | peptidase | phrog_87 | metallo-protease | other | -1 | 32357 | 32680 |
| AVP42250.1 | MH020241_p24 | lysin B | phrog_102 | endolysin | lysis | 1 | 20871 | 21674 |
| AVP42229.1 | MH020241_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 1956 | 3317 |
| AVP42242.1 | MH020241_p16 | tape measure protein | phrog_4197 | tail length tape measure protein | tail | 1 | 10023 | 15515 |
| AVP42245.1 | MH020241_p19 | lysin A, L-Ala-D-Glu peptidase domain | phrog_1512 | endolysin | lysis | 1 | 18032 | 18739 |
| AVP42278.1 | MH020241_p52 | DNA binding protein | phrog_1622 | unknown function | unknown function | 1 | 37237 | 37467 |
| AVP42228.1 | MH020241_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 361 | 1929 |
| AVP42286.1 | MH020241_p60 | hypothetical protein | phrog_8336 | unknown function | unknown function | 1 | 41272 | 41766 |
| AVP42233.1 | MH020241_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6145 | 6579 |
| AVP42254.1 | MH020241_p28 | hypothetical protein | phrog_8055 | unknown function | unknown function | 1 | 24622 | 24957 |
| AVP42259.1 | MH020241_p33 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 28627 | 28854 |
| AVP42256.1 | MH020241_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27104 | 28015 |
| AVP42280.1 | MH020241_p54 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 37817 | 38170 |
| AVP42231.1 | MH020241_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4731 | 5183 |
| AVP42268.1 | MH020241_p42 | hypothetical protein | phrog_15107 | unknown function | unknown function | 1 | 34029 | 34205 |