Genomic map of Escherichia phage vB_EcoS-Sa179w3YLVW (MH023293)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH023293
Definition
Escherichia phage vB_EcoS-Sa179w3YLVW, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
46833
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
45.97
Number of singletons
9
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVP40240.1 MH023293_p54 glutaredoxin phrog_309 terminase small subunit head and packaging 1 33596 34057
AVP40220.1 MH023293_p34 type III restriction endonuclease phrog_824 unknown function unknown function -1 22450 22905
AVP40251.1 MH023293_p65 hypothetical protein phrog_7798 unknown function unknown function -1 40130 40774
AVP40234.1 MH023293_p48 eae protein phrog_614 unknown function unknown function 1 31791 32258
AVP40214.1 MH023293_p28 tail protein phrog_1538 tail length tape measure protein tail 1 12968 15910
AVP40264.1 MH023293_p78 hypothetical protein phrog_37091 unknown function unknown function 1 44726 44923
AVP40248.1 MH023293_p62 hypothetical protein phrog_17303 unknown function unknown function 1 37451 37654
AVP40193.1 MH023293_p7 hypothetical protein phrog_5335 unknown function unknown function 1 3928 4776
AVP40245.1 MH023293_p59 hypothetical protein phrog_13627 unknown function unknown function 1 36712 36906
AVP40247.1 MH023293_p61 transcriptional activator protein C1 phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 1 37140 37451
AVP40252.1 MH023293_p66 hypothetical protein singleton unknown function unknown function -1 40771 40950
AVP40225.1 MH023293_p39 regulatory protein cro phrog_35 transcriptional repressor transcription regulation 1 26982 27224
AVP40224.1 MH023293_p38 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 26023 26847
AVP40205.1 MH023293_p19 structural polyprotein phrog_5 tail completion or Neck1 protein connector 1 8913 9311
AVP40256.1 MH023293_p70 lysozyme-like domain-containing protein phrog_10457 endolysin lysis 1 41628 41906
AVP40246.1 MH023293_p60 hypothetical protein singleton unknown function unknown function 1 36906 37136
AVP40188.1 MH023293_p2 hypothetical protein phrog_18423 unknown function unknown function 1 353 499
AVP40232.1 MH023293_p46 hypothetical protein phrog_16924 unknown function unknown function 1 31342 31524
AVP40204.1 MH023293_p18 hypothetical protein phrog_797 unknown function unknown function 1 8572 8913
AVP40260.1 MH023293_p74 tail protein phrog_312 Rz-like spanin lysis 1 42719 43210
AVP40231.1 MH023293_p45 hypothetical protein singleton unknown function unknown function 1 31180 31338
AVP40268.1 MH023293_p82 hypothetical protein phrog_1687 MarR family transcrition regulator transcription regulation 1 45721 46209
AVP40221.1 MH023293_p35 ATP-dependent DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 22902 24767
AVP40195.1 MH023293_p9 hypothetical protein phrog_4439 unknown function unknown function -1 5347 5520
AVP40190.1 MH023293_p4 capsid decoration protein phrog_766 head decoration head and packaging 1 2106 2573
AVP40239.1 MH023293_p53 hypothetical protein phrog_18384 unknown function unknown function 1 33263 33484
AVP40263.1 MH023293_p77 hypothetical protein phrog_14963 unknown function unknown function -1 44401 44625
AVP40250.1 MH023293_p64 hypothetical protein phrog_758 head morphogenesis head and packaging 1 39096 40046
AVP40244.1 MH023293_p58 hypothetical protein phrog_6596 unknown function unknown function 1 36295 36702
AVP40237.1 MH023293_p51 hypothetical protein phrog_9340 unknown function unknown function 1 33042 33152
AVP40226.1 MH023293_p40 hypothetical protein phrog_33005 unknown function unknown function -1 27252 27647
AVP40196.1 MH023293_p10 hypothetical protein singleton unknown function unknown function -1 5520 5741
AVP40218.1 MH023293_p32 hypothetical protein phrog_469 tail protein tail 1 17360 19711
AVP40208.1 MH023293_p22 hypothetical protein phrog_924 unknown function unknown function -1 11002 11199
AVP40217.1 MH023293_p31 tail assembly protein phrog_329 minor tail protein tail 1 16846 17316
AVP40191.1 MH023293_p5 hypothetical protein phrog_771 virion structural protein head and packaging 1 2576 3646
AVP40230.1 MH023293_p44 hypothetical protein phrog_35977 unknown function unknown function 1 30995 31090
AVP40210.1 MH023293_p24 hypothetical protein phrog_17424 unknown function unknown function -1 11483 11626
AVP40235.1 MH023293_p49 hypothetical protein phrog_3126 unknown function unknown function 1 32255 32602
AVP40269.1 MH023293_p83 hypothetical protein phrog_17117 unknown function unknown function 1 46175 46351
AVP40206.1 MH023293_p20 hypothetical protein phrog_782 unknown function unknown function 1 9308 9682
AVP40270.1 MH023293_p84 hypothetical protein phrog_343 unknown function unknown function 1 46335 46739
AVP40266.1 MH023293_p80 hypothetical protein singleton unknown function unknown function 1 45175 45489
AVP40243.1 MH023293_p57 hypothetical protein phrog_13301 unknown function unknown function 1 35897 36103
AVP40236.1 MH023293_p50 hypothetical protein phrog_27229 unknown function unknown function 1 32666 33052
AVP40216.1 MH023293_p30 sliding clamp phrog_396 minor tail protein tail 1 16383 16853
AVP40255.1 MH023293_p69 hypothetical protein singleton unknown function unknown function -1 41361 41522
AVP40257.1 MH023293_p71 endolysin phrog_90 endolysin lysis 1 41896 42360
AVP40249.1 MH023293_p63 hypothetical protein phrog_146 portal protein head and packaging 1 37703 39115
AVP40192.1 MH023293_p6 hypothetical protein phrog_2138 unknown function unknown function 1 3690 3887
AVP40211.1 MH023293_p25 immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 11623 11817
AVP40258.1 MH023293_p72 hypothetical protein phrog_13249 holin lysis 1 42357 42596
AVP40194.1 MH023293_p8 hypothetical protein phrog_3007 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4811 5347
AVP40202.1 MH023293_p16 hypothetical protein phrog_13738 membrane protein moron, auxiliary metabolic gene and host takeover 1 7918 8202
AVP40242.1 MH023293_p56 head completion protein phrog_19403 head protein head and packaging -1 35370 35723
AVP40238.1 MH023293_p52 hypothetical protein phrog_5407 unknown function unknown function 1 33145 33324
AVP40199.1 MH023293_p13 hypothetical protein phrog_8760 unknown function unknown function -1 6755 6946
AVP40215.1 MH023293_p29 hypothetical protein phrog_384 virion structural protein head and packaging 1 15910 16383
AVP40262.1 MH023293_p76 hypothetical protein phrog_17775 unknown function unknown function -1 43877 44404
AVP40197.1 MH023293_p11 hypothetical protein phrog_2358 unknown function unknown function -1 5741 5944
AVP40227.1 MH023293_p41 bifunctional DNA primase/polymerase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 27644 29977
AVP40209.1 MH023293_p23 NinX phrog_444 unknown function unknown function -1 11196 11486
AVP40265.1 MH023293_p79 hypothetical protein phrog_15697 unknown function unknown function 1 44984 45178
AVP40212.1 MH023293_p26 hypothetical protein phrog_2315 unknown function unknown function -1 11850 12143
AVP40201.1 MH023293_p15 hypothetical protein phrog_14688 lipoprotein other 1 7445 7885
AVP40222.1 MH023293_p36 hypothetical protein singleton unknown function unknown function -1 24778 24993
AVP40200.1 MH023293_p14 hypothetical protein phrog_14587 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 6949 7209
AVP40259.1 MH023293_p73 hypothetical protein singleton unknown function unknown function 1 42577 42738
AVP40223.1 MH023293_p37 hypothetical protein phrog_9002 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 25018 25539
AVP40203.1 MH023293_p17 hypothetical protein phrog_786 unknown function unknown function 1 8183 8575
AVP40233.1 MH023293_p47 hypothetical protein phrog_10786 unknown function unknown function 1 31561 31794
AVP40187.1 MH023293_p1 hypothetical protein phrog_14549 unknown function unknown function 1 30 356
AVP40241.1 MH023293_p55 hypothetical protein phrog_2 terminase large subunit head and packaging 1 34032 35339
AVP40267.1 MH023293_p81 hypothetical protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 45486 45731
AVP40213.1 MH023293_p27 sigma factor for late transcription phrog_791 unknown function unknown function 1 12261 12968
AVP40189.1 MH023293_p3 hypothetical protein phrog_760 unknown function unknown function 1 694 2106
AVP40254.1 MH023293_p68 hypothetical protein phrog_21280 unknown function unknown function -1 41224 41367
AVP40229.1 MH023293_p43 hypothetical protein phrog_2180 unknown function unknown function 1 30852 30998
AVP40207.1 MH023293_p21 neck whiskers protein phrog_853 major tail protein tail 1 10256 10972
AVP40253.1 MH023293_p67 hypothetical protein singleton unknown function unknown function -1 40947 41216
AVP40261.1 MH023293_p75 hypothetical protein phrog_16624 unknown function unknown function -1 43350 43655
AVP40198.1 MH023293_p12 hypothetical protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 5944 6753
AVP40219.1 MH023293_p33 tail spike protein phrog_16586 tail fiber protein tail 1 19751 22297
AVP40228.1 MH023293_p42 hypothetical protein phrog_28700 unknown function unknown function -1 29974 30189