| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MH023293 |
Definition |
Escherichia phage vB_EcoS-Sa179w3YLVW, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
46833 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
84 |
%GC |
45.97 |
Number of singletons |
9 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVP40240.1 | MH023293_p54 | glutaredoxin | phrog_309 | terminase small subunit | head and packaging | 1 | 33596 | 34057 |
| AVP40220.1 | MH023293_p34 | type III restriction endonuclease | phrog_824 | unknown function | unknown function | -1 | 22450 | 22905 |
| AVP40251.1 | MH023293_p65 | hypothetical protein | phrog_7798 | unknown function | unknown function | -1 | 40130 | 40774 |
| AVP40234.1 | MH023293_p48 | eae protein | phrog_614 | unknown function | unknown function | 1 | 31791 | 32258 |
| AVP40214.1 | MH023293_p28 | tail protein | phrog_1538 | tail length tape measure protein | tail | 1 | 12968 | 15910 |
| AVP40264.1 | MH023293_p78 | hypothetical protein | phrog_37091 | unknown function | unknown function | 1 | 44726 | 44923 |
| AVP40248.1 | MH023293_p62 | hypothetical protein | phrog_17303 | unknown function | unknown function | 1 | 37451 | 37654 |
| AVP40193.1 | MH023293_p7 | hypothetical protein | phrog_5335 | unknown function | unknown function | 1 | 3928 | 4776 |
| AVP40245.1 | MH023293_p59 | hypothetical protein | phrog_13627 | unknown function | unknown function | 1 | 36712 | 36906 |
| AVP40247.1 | MH023293_p61 | transcriptional activator protein C1 | phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | 1 | 37140 | 37451 |
| AVP40252.1 | MH023293_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40771 | 40950 |
| AVP40225.1 | MH023293_p39 | regulatory protein cro | phrog_35 | transcriptional repressor | transcription regulation | 1 | 26982 | 27224 |
| AVP40224.1 | MH023293_p38 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 26023 | 26847 |
| AVP40205.1 | MH023293_p19 | structural polyprotein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 8913 | 9311 |
| AVP40256.1 | MH023293_p70 | lysozyme-like domain-containing protein | phrog_10457 | endolysin | lysis | 1 | 41628 | 41906 |
| AVP40246.1 | MH023293_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36906 | 37136 |
| AVP40188.1 | MH023293_p2 | hypothetical protein | phrog_18423 | unknown function | unknown function | 1 | 353 | 499 |
| AVP40232.1 | MH023293_p46 | hypothetical protein | phrog_16924 | unknown function | unknown function | 1 | 31342 | 31524 |
| AVP40204.1 | MH023293_p18 | hypothetical protein | phrog_797 | unknown function | unknown function | 1 | 8572 | 8913 |
| AVP40260.1 | MH023293_p74 | tail protein | phrog_312 | Rz-like spanin | lysis | 1 | 42719 | 43210 |
| AVP40231.1 | MH023293_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31180 | 31338 |
| AVP40268.1 | MH023293_p82 | hypothetical protein | phrog_1687 | MarR family transcrition regulator | transcription regulation | 1 | 45721 | 46209 |
| AVP40221.1 | MH023293_p35 | ATP-dependent DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 22902 | 24767 |
| AVP40195.1 | MH023293_p9 | hypothetical protein | phrog_4439 | unknown function | unknown function | -1 | 5347 | 5520 |
| AVP40190.1 | MH023293_p4 | capsid decoration protein | phrog_766 | head decoration | head and packaging | 1 | 2106 | 2573 |
| AVP40239.1 | MH023293_p53 | hypothetical protein | phrog_18384 | unknown function | unknown function | 1 | 33263 | 33484 |
| AVP40263.1 | MH023293_p77 | hypothetical protein | phrog_14963 | unknown function | unknown function | -1 | 44401 | 44625 |
| AVP40250.1 | MH023293_p64 | hypothetical protein | phrog_758 | head morphogenesis | head and packaging | 1 | 39096 | 40046 |
| AVP40244.1 | MH023293_p58 | hypothetical protein | phrog_6596 | unknown function | unknown function | 1 | 36295 | 36702 |
| AVP40237.1 | MH023293_p51 | hypothetical protein | phrog_9340 | unknown function | unknown function | 1 | 33042 | 33152 |
| AVP40226.1 | MH023293_p40 | hypothetical protein | phrog_33005 | unknown function | unknown function | -1 | 27252 | 27647 |
| AVP40196.1 | MH023293_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5520 | 5741 |
| AVP40218.1 | MH023293_p32 | hypothetical protein | phrog_469 | tail protein | tail | 1 | 17360 | 19711 |
| AVP40208.1 | MH023293_p22 | hypothetical protein | phrog_924 | unknown function | unknown function | -1 | 11002 | 11199 |
| AVP40217.1 | MH023293_p31 | tail assembly protein | phrog_329 | minor tail protein | tail | 1 | 16846 | 17316 |
| AVP40191.1 | MH023293_p5 | hypothetical protein | phrog_771 | virion structural protein | head and packaging | 1 | 2576 | 3646 |
| AVP40230.1 | MH023293_p44 | hypothetical protein | phrog_35977 | unknown function | unknown function | 1 | 30995 | 31090 |
| AVP40210.1 | MH023293_p24 | hypothetical protein | phrog_17424 | unknown function | unknown function | -1 | 11483 | 11626 |
| AVP40235.1 | MH023293_p49 | hypothetical protein | phrog_3126 | unknown function | unknown function | 1 | 32255 | 32602 |
| AVP40269.1 | MH023293_p83 | hypothetical protein | phrog_17117 | unknown function | unknown function | 1 | 46175 | 46351 |
| AVP40206.1 | MH023293_p20 | hypothetical protein | phrog_782 | unknown function | unknown function | 1 | 9308 | 9682 |
| AVP40270.1 | MH023293_p84 | hypothetical protein | phrog_343 | unknown function | unknown function | 1 | 46335 | 46739 |
| AVP40266.1 | MH023293_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45175 | 45489 |
| AVP40243.1 | MH023293_p57 | hypothetical protein | phrog_13301 | unknown function | unknown function | 1 | 35897 | 36103 |
| AVP40236.1 | MH023293_p50 | hypothetical protein | phrog_27229 | unknown function | unknown function | 1 | 32666 | 33052 |
| AVP40216.1 | MH023293_p30 | sliding clamp | phrog_396 | minor tail protein | tail | 1 | 16383 | 16853 |
| AVP40255.1 | MH023293_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41361 | 41522 |
| AVP40257.1 | MH023293_p71 | endolysin | phrog_90 | endolysin | lysis | 1 | 41896 | 42360 |
| AVP40249.1 | MH023293_p63 | hypothetical protein | phrog_146 | portal protein | head and packaging | 1 | 37703 | 39115 |
| AVP40192.1 | MH023293_p6 | hypothetical protein | phrog_2138 | unknown function | unknown function | 1 | 3690 | 3887 |
| AVP40211.1 | MH023293_p25 | immunity protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 11623 | 11817 |
| AVP40258.1 | MH023293_p72 | hypothetical protein | phrog_13249 | holin | lysis | 1 | 42357 | 42596 |
| AVP40194.1 | MH023293_p8 | hypothetical protein | phrog_3007 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 4811 | 5347 |
| AVP40202.1 | MH023293_p16 | hypothetical protein | phrog_13738 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 7918 | 8202 |
| AVP40242.1 | MH023293_p56 | head completion protein | phrog_19403 | head protein | head and packaging | -1 | 35370 | 35723 |
| AVP40238.1 | MH023293_p52 | hypothetical protein | phrog_5407 | unknown function | unknown function | 1 | 33145 | 33324 |
| AVP40199.1 | MH023293_p13 | hypothetical protein | phrog_8760 | unknown function | unknown function | -1 | 6755 | 6946 |
| AVP40215.1 | MH023293_p29 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 15910 | 16383 |
| AVP40262.1 | MH023293_p76 | hypothetical protein | phrog_17775 | unknown function | unknown function | -1 | 43877 | 44404 |
| AVP40197.1 | MH023293_p11 | hypothetical protein | phrog_2358 | unknown function | unknown function | -1 | 5741 | 5944 |
| AVP40227.1 | MH023293_p41 | bifunctional DNA primase/polymerase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 27644 | 29977 |
| AVP40209.1 | MH023293_p23 | NinX | phrog_444 | unknown function | unknown function | -1 | 11196 | 11486 |
| AVP40265.1 | MH023293_p79 | hypothetical protein | phrog_15697 | unknown function | unknown function | 1 | 44984 | 45178 |
| AVP40212.1 | MH023293_p26 | hypothetical protein | phrog_2315 | unknown function | unknown function | -1 | 11850 | 12143 |
| AVP40201.1 | MH023293_p15 | hypothetical protein | phrog_14688 | lipoprotein | other | 1 | 7445 | 7885 |
| AVP40222.1 | MH023293_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24778 | 24993 |
| AVP40200.1 | MH023293_p14 | hypothetical protein | phrog_14587 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 6949 | 7209 |
| AVP40259.1 | MH023293_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42577 | 42738 |
| AVP40223.1 | MH023293_p37 | hypothetical protein | phrog_9002 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25018 | 25539 |
| AVP40203.1 | MH023293_p17 | hypothetical protein | phrog_786 | unknown function | unknown function | 1 | 8183 | 8575 |
| AVP40233.1 | MH023293_p47 | hypothetical protein | phrog_10786 | unknown function | unknown function | 1 | 31561 | 31794 |
| AVP40187.1 | MH023293_p1 | hypothetical protein | phrog_14549 | unknown function | unknown function | 1 | 30 | 356 |
| AVP40241.1 | MH023293_p55 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | 1 | 34032 | 35339 |
| AVP40267.1 | MH023293_p81 | hypothetical protein | phrog_599 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | 1 | 45486 | 45731 |
| AVP40213.1 | MH023293_p27 | sigma factor for late transcription | phrog_791 | unknown function | unknown function | 1 | 12261 | 12968 |
| AVP40189.1 | MH023293_p3 | hypothetical protein | phrog_760 | unknown function | unknown function | 1 | 694 | 2106 |
| AVP40254.1 | MH023293_p68 | hypothetical protein | phrog_21280 | unknown function | unknown function | -1 | 41224 | 41367 |
| AVP40229.1 | MH023293_p43 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 30852 | 30998 |
| AVP40207.1 | MH023293_p21 | neck whiskers protein | phrog_853 | major tail protein | tail | 1 | 10256 | 10972 |
| AVP40253.1 | MH023293_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40947 | 41216 |
| AVP40261.1 | MH023293_p75 | hypothetical protein | phrog_16624 | unknown function | unknown function | -1 | 43350 | 43655 |
| AVP40198.1 | MH023293_p12 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 5944 | 6753 |
| AVP40219.1 | MH023293_p33 | tail spike protein | phrog_16586 | tail fiber protein | tail | 1 | 19751 | 22297 |
| AVP40228.1 | MH023293_p42 | hypothetical protein | phrog_28700 | unknown function | unknown function | -1 | 29974 | 30189 |