Genomic map of Mycobacterium phage BigMama (MH025888)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MH025888
Definition
Mycobacterium phage BigMama, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dclasvirinae; Plotvirus; Mycobacterium virus Plot.
DB of origin
NUCCORE
Length
64592
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
59.69
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVP43166.1 MH025888_p68 resolvase phrog_1981 unknown function unknown function 1 54879 55550
AVP43163.1 MH025888_p65 DNA polymerase III alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 49772 53074
AVP43182.1 MH025888_p84 hypothetical protein phrog_11488 DNA binding protein DNA, RNA and nucleotide metabolism 1 60135 60677
AVP43185.1 MH025888_p87 DNA primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 61224 64166
AVP43124.1 MH025888_p26 hypothetical protein phrog_7161 minor tail protein tail 1 21160 22680
AVP43122.1 MH025888_p23 tail assembly chaperone phrog_4336 tail assembly chaperone tail 1 15502 16155
AVP43129.1 MH025888_p31 hypothetical protein phrog_6443 unknown function unknown function 1 29526 29846
AVP43123.1 MH025888_p25 tape measure protein phrog_6435 tail length tape measure protein tail 1 16398 21170
AVP43125.1 MH025888_p27 minor tail protein phrog_1885 minor tail protein tail 1 22677 24332
AVP43161.1 MH025888_p63 hypothetical protein phrog_10271 unknown function unknown function 1 48473 48958
AVP43111.1 MH025888_p12 hypothetical protein phrog_4866 head scaffolding protein head and packaging 1 9742 10449
AVP43107.1 MH025888_p8 portal protein phrog_64 portal protein head and packaging 1 6404 7987
AVP43156.1 MH025888_p58 hypothetical protein phrog_10064 unknown function unknown function 1 45366 46301
AVP43104.1 MH025888_p5 hypothetical protein phrog_11599 unknown function unknown function 1 2155 3852
AVP43143.1 MH025888_p45 hypothetical protein phrog_421 unknown function unknown function 1 37116 38225
AVP43100.1 MH025888_p1 hypothetical protein phrog_5460 unknown function unknown function 1 1 309
AVP43142.1 MH025888_p44 hypothetical protein phrog_7969 unknown function unknown function 1 36869 37114
AVP43158.1 MH025888_p60 hypothetical protein phrog_8720 unknown function unknown function 1 46516 47319
AVP43173.1 MH025888_p75 hypothetical protein phrog_10149 unknown function unknown function 1 57340 57912
AVP43149.1 MH025888_p51 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 39745 41688
AVP43162.1 MH025888_p64 hypothetical protein phrog_3142 FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase moron, auxiliary metabolic gene and host takeover 1 48966 49661
AVP43167.1 MH025888_p69 hypothetical protein phrog_2507 unknown function unknown function 1 55552 55752
AVP43178.1 MH025888_p80 hypothetical protein phrog_10449 unknown function unknown function 1 59158 59460
AVP43117.1 MH025888_p18 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 13205 13567
AVP43103.1 MH025888_p4 hypothetical protein phrog_10761 unknown function unknown function 1 1790 1954
AVP43171.1 MH025888_p73 hypothetical protein phrog_10394 unknown function unknown function 1 56669 56884
AVP43150.1 MH025888_p52 hypothetical protein phrog_10722 unknown function unknown function 1 41685 41966
AVP43133.1 MH025888_p35 hypothetical protein phrog_21841 unknown function unknown function 1 31534 31791
AVP43146.1 MH025888_p48 hypothetical protein phrog_5307 unknown function unknown function 1 38562 39152
AVP43165.1 MH025888_p67 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 53625 54725
AVP43159.1 MH025888_p61 hydrolase phrog_415 polynucleotide kinase other 1 47323 47940
AVP43151.1 MH025888_p53 hypothetical protein phrog_10024 unknown function unknown function 1 42069 42557
AVP43106.1 MH025888_p7 terminase phrog_2 terminase large subunit head and packaging 1 4616 6382
AVP43134.1 MH025888_p36 hypothetical protein phrog_8515 unknown function unknown function 1 31791 32330
AVP43183.1 MH025888_p85 hypothetical protein phrog_10882 unknown function unknown function 1 60770 61036
AVP43113.1 MH025888_p14 major capsid protein phrog_3990 major head protein head and packaging 1 10894 12105
AVP43148.1 MH025888_p50 hypothetical protein phrog_17737 unknown function unknown function 1 39527 39742
AVP43175.1 MH025888_p77 hypothetical protein phrog_13969 unknown function unknown function 1 58483 58608
AVP43112.1 MH025888_p13 hypothetical protein phrog_5042 unknown function unknown function 1 10465 10884
AVP43179.1 MH025888_p81 hypothetical protein phrog_11872 unknown function unknown function 1 59450 59743
AVP43102.1 MH025888_p3 hypothetical protein phrog_10843 unknown function unknown function 1 1586 1780
AVP43184.1 MH025888_p86 hypothetical protein phrog_2001 unknown function unknown function 1 61043 61156
AVP43131.1 MH025888_p33 lysin A phrog_1512 endolysin lysis 1 30286 31269
AVP43121.1 MH025888_p22 major tail protein phrog_4971 major tail protein tail 1 14578 15420
AVP43140.1 MH025888_p42 hypothetical protein phrog_10424 unknown function unknown function -1 35822 36307
AVP43180.1 MH025888_p82 hypothetical protein singleton unknown function unknown function -1 59713 59937
AVP43147.1 MH025888_p49 hypothetical protein phrog_11197 unknown function unknown function 1 39230 39469
AVP43139.1 MH025888_p41 hypothetical protein singleton unknown function unknown function 1 35527 35724
AVP43145.1 MH025888_p47 hypothetical protein phrog_11235 unknown function unknown function 1 38319 38498
AVP43108.1 MH025888_p9 hypothetical protein phrog_1375 unknown function unknown function 1 7998 8210
AVP43137.1 MH025888_p39 hypothetical protein phrog_11465 unknown function unknown function 1 34040 34621
AVP43144.1 MH025888_p46 hypothetical protein phrog_13277 unknown function unknown function 1 38225 38329
AVP43105.1 MH025888_p6 VIP2-like toxin phrog_15359 unknown function unknown function 1 3849 4619
AVP43109.1 MH025888_p10 hypothetical protein phrog_5556 tail protein tail 1 8207 8668
AVP43168.1 MH025888_p70 hypothetical protein phrog_10832 unknown function unknown function 1 55749 56102
AVP43132.1 MH025888_p34 hypothetical protein phrog_9801 unknown function unknown function 1 31266 31520
AVP43172.1 MH025888_p74 hypothetical protein phrog_658 unknown function unknown function 1 56888 57328
AVP43164.1 MH025888_p66 hypothetical protein phrog_10638 unknown function unknown function 1 53076 53597
AVP43119.1 MH025888_p20 hypothetical protein phrog_10150 unknown function unknown function 1 14020 14376
AVP43157.1 MH025888_p59 hypothetical protein phrog_27898 unknown function unknown function 1 46403 46519
AVP43118.1 MH025888_p19 hypothetical protein singleton unknown function unknown function 1 13696 13983
AVP43135.1 MH025888_p37 hypothetical protein phrog_726 unknown function unknown function 1 32314 32769
AVP43127.1 MH025888_p29 D-ala-D-ala-carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 26602 28650
AVP43128.1 MH025888_p30 minor tail protein phrog_553 minor tail protein tail 1 28650 29516
AVP43101.1 MH025888_p2 hypothetical protein phrog_7407 unknown function unknown function 1 421 1542
AVP43170.1 MH025888_p72 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 56377 56610
AVP43138.1 MH025888_p40 hypothetical protein phrog_636 unknown function unknown function -1 34627 35508
AVP43110.1 MH025888_p11 hypothetical protein phrog_115 minor head protein head and packaging 1 8804 9709
AVP43116.1 MH025888_p17 hypothetical protein phrog_4904 unknown function unknown function 1 12805 13212
AVP43181.1 MH025888_p83 hypothetical protein phrog_6601 unknown function unknown function 1 59965 60138
AVP43120.1 MH025888_p21 hypothetical protein phrog_5278 unknown function unknown function 1 14388 14588
AVP43177.1 MH025888_p79 hypothetical protein phrog_8685 unknown function unknown function 1 58916 59161
AVP43174.1 MH025888_p76 hypothetical protein phrog_10814 unknown function unknown function 1 57929 58483
AVP43160.1 MH025888_p62 methyltransferase phrog_6636 methyltransferase other 1 47940 48470
AVP43114.1 MH025888_p15 hypothetical protein phrog_5318 unknown function unknown function 1 12102 12473
AVP43169.1 MH025888_p71 hypothetical protein phrog_10494 unknown function unknown function 1 56099 56374
AVP43136.1 MH025888_p38 lysin B phrog_102 endolysin lysis 1 32771 34030
AVP43153.1 MH025888_p55 exonuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 43123 44301
AVP43176.1 MH025888_p78 hypothetical protein phrog_1581 unknown function unknown function 1 58605 58919
AVP43141.1 MH025888_p43 hypothetical protein phrog_9402 unknown function unknown function 1 36493 36774
AVP43126.1 MH025888_p28 minor tail protein phrog_346 minor tail protein tail 1 24332 26602
AVP43152.1 MH025888_p54 hypothetical protein phrog_549 unknown function unknown function 1 42738 43118
AVP43155.1 MH025888_p57 DNA recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44505 45365
AVP43130.1 MH025888_p32 hypothetical protein phrog_3758 virion structural protein head and packaging 1 29849 30277
AVP43154.1 MH025888_p56 hypothetical protein phrog_8491 unknown function unknown function 1 44303 44491
AVP43186.1 MH025888_p24 tail assembly chaperone phrog_6778 tail assembly chaperone tail 1 16178 16396
AVP43115.1 MH025888_p16 hypothetical protein phrog_5274 unknown function unknown function 1 12476 12808